Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hcn3O88705 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Hcn3O88705 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Hcn3O88705 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hcn3O88705 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Hcn3O88705 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.71■□□□□ 0.43
Hcn3O88705 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hcn3O88705 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.71■□□□□ 0.43
Hcn3O88705 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hcn3O88705 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hcn3O88705 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hcn3O88705 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hcn3O88705 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC17.71■□□□□ 0.43
Hcn3O88705 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hcn3O88705 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Hcn3O88705 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.42
Hcn3O88705 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Hcn3O88705 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Hcn3O88705 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
Hcn3O88705 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC17.7■□□□□ 0.42
Hcn3O88705 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Hcn3O88705 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC17.7■□□□□ 0.42
Hcn3O88705 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Hcn3O88705 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.7■□□□□ 0.42
Hcn3O88705 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hcn3O88705 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Hcn3O88705 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hcn3O88705 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hcn3O88705 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Hcn3O88705 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Hcn3O88705 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hcn3O88705 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hcn3O88705 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Hcn3O88705 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hcn3O88705 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hcn3O88705 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Hcn3O88705 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Hcn3O88705 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hcn3O88705 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Hcn3O88705 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hcn3O88705 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hcn3O88705 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hcn3O88705 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hcn3O88705 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hcn3O88705 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Hcn3O88705 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC17.68■□□□□ 0.42
Hcn3O88705 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Hcn3O88705 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hcn3O88705 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC17.68■□□□□ 0.42
Hcn3O88705 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Hcn3O88705 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hcn3O88705 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hcn3O88705 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hcn3O88705 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.68■□□□□ 0.42
Hcn3O88705 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hcn3O88705 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hcn3O88705 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Hcn3O88705 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hcn3O88705 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hcn3O88705 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.67■□□□□ 0.42
Hcn3O88705 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.67■□□□□ 0.42
Hcn3O88705 Serp2-204ENSMUST00000228055 705 ntBASIC17.67■□□□□ 0.42
Hcn3O88705 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Hcn3O88705 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
Hcn3O88705 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Hcn3O88705 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.67■□□□□ 0.42
Hcn3O88705 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hcn3O88705 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hcn3O88705 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Hcn3O88705 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hcn3O88705 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hcn3O88705 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hcn3O88705 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hcn3O88705 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
Hcn3O88705 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hcn3O88705 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hcn3O88705 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hcn3O88705 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hcn3O88705 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hcn3O88705 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.66■□□□□ 0.42
Hcn3O88705 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hcn3O88705 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Hcn3O88705 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hcn3O88705 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hcn3O88705 Gm12821-201ENSMUST00000120022 600 ntBASIC17.66■□□□□ 0.42
Hcn3O88705 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hcn3O88705 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Hcn3O88705 Gm43137-201ENSMUST00000198052 594 ntBASIC17.66■□□□□ 0.42
Hcn3O88705 Appbp2os-202ENSMUST00000206972 447 ntBASIC17.66■□□□□ 0.42
Hcn3O88705 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hcn3O88705 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hcn3O88705 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hcn3O88705 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.65■□□□□ 0.42
Hcn3O88705 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hcn3O88705 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hcn3O88705 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hcn3O88705 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hcn3O88705 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hcn3O88705 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hcn3O88705 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms