Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
ClppO88696 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18■□□□□ 0.47
ClppO88696 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ClppO88696 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18■□□□□ 0.47
ClppO88696 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ClppO88696 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ClppO88696 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
ClppO88696 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
ClppO88696 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC17.99■□□□□ 0.47
ClppO88696 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
ClppO88696 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
ClppO88696 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.99■□□□□ 0.47
ClppO88696 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.99■□□□□ 0.47
ClppO88696 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.99■□□□□ 0.47
ClppO88696 Gm5408-201ENSMUST00000197998 747 ntBASIC17.99■□□□□ 0.47
ClppO88696 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ClppO88696 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.99■□□□□ 0.47
ClppO88696 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ClppO88696 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ClppO88696 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ClppO88696 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
ClppO88696 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ClppO88696 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ClppO88696 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
ClppO88696 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
ClppO88696 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ClppO88696 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ClppO88696 Nespas-201ENSMUST00000143738 1083 ntBASIC17.98■□□□□ 0.47
ClppO88696 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ClppO88696 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.98■□□□□ 0.47
ClppO88696 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ClppO88696 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.98■□□□□ 0.47
ClppO88696 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ClppO88696 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ClppO88696 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ClppO88696 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
ClppO88696 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
ClppO88696 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC17.98■□□□□ 0.47
ClppO88696 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
ClppO88696 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
ClppO88696 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.97■□□□□ 0.47
ClppO88696 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ClppO88696 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
ClppO88696 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.97■□□□□ 0.47
ClppO88696 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ClppO88696 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ClppO88696 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ClppO88696 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.97■□□□□ 0.47
ClppO88696 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ClppO88696 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ClppO88696 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ClppO88696 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ClppO88696 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
ClppO88696 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
ClppO88696 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.96■□□□□ 0.47
ClppO88696 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.96■□□□□ 0.47
ClppO88696 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
ClppO88696 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
ClppO88696 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ClppO88696 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ClppO88696 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ClppO88696 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
ClppO88696 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ClppO88696 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.96■□□□□ 0.46
ClppO88696 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ClppO88696 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ClppO88696 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
ClppO88696 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
ClppO88696 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ClppO88696 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ClppO88696 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ClppO88696 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ClppO88696 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
ClppO88696 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.95■□□□□ 0.46
ClppO88696 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.95■□□□□ 0.46
ClppO88696 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
ClppO88696 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
ClppO88696 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ClppO88696 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
ClppO88696 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ClppO88696 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ClppO88696 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
ClppO88696 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ClppO88696 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
ClppO88696 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ClppO88696 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
ClppO88696 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ClppO88696 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ClppO88696 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ClppO88696 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ClppO88696 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ClppO88696 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ClppO88696 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ClppO88696 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
ClppO88696 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ClppO88696 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ClppO88696 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.93■□□□□ 0.46
ClppO88696 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
ClppO88696 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ClppO88696 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms