Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ChkaO54804 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
ChkaO54804 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ChkaO54804 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ChkaO54804 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
ChkaO54804 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ChkaO54804 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ChkaO54804 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ChkaO54804 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ChkaO54804 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ChkaO54804 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
ChkaO54804 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ChkaO54804 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ChkaO54804 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
ChkaO54804 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
ChkaO54804 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ChkaO54804 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ChkaO54804 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ChkaO54804 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
ChkaO54804 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.71■□□□□ 0.59
ChkaO54804 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.71■□□□□ 0.59
ChkaO54804 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.71■□□□□ 0.59
ChkaO54804 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
ChkaO54804 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.71■□□□□ 0.59
ChkaO54804 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ChkaO54804 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
ChkaO54804 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ChkaO54804 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
ChkaO54804 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
ChkaO54804 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ChkaO54804 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ChkaO54804 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.7■□□□□ 0.58
ChkaO54804 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.7■□□□□ 0.58
ChkaO54804 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ChkaO54804 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.7■□□□□ 0.58
ChkaO54804 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.7■□□□□ 0.58
ChkaO54804 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.7■□□□□ 0.58
ChkaO54804 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.7■□□□□ 0.58
ChkaO54804 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.7■□□□□ 0.58
ChkaO54804 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ChkaO54804 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ChkaO54804 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.7■□□□□ 0.58
ChkaO54804 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ChkaO54804 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ChkaO54804 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ChkaO54804 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ChkaO54804 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ChkaO54804 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
ChkaO54804 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ChkaO54804 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
ChkaO54804 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ChkaO54804 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ChkaO54804 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ChkaO54804 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ChkaO54804 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ChkaO54804 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.69■□□□□ 0.58
ChkaO54804 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ChkaO54804 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
ChkaO54804 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
ChkaO54804 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ChkaO54804 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
ChkaO54804 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.68■□□□□ 0.58
ChkaO54804 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.68■□□□□ 0.58
ChkaO54804 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ChkaO54804 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
ChkaO54804 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ChkaO54804 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ChkaO54804 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ChkaO54804 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ChkaO54804 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ChkaO54804 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ChkaO54804 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ChkaO54804 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ChkaO54804 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
ChkaO54804 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ChkaO54804 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
ChkaO54804 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.67■□□□□ 0.58
ChkaO54804 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ChkaO54804 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ChkaO54804 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ChkaO54804 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ChkaO54804 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ChkaO54804 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ChkaO54804 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ChkaO54804 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ChkaO54804 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ChkaO54804 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
ChkaO54804 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ChkaO54804 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.67■□□□□ 0.58
ChkaO54804 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
ChkaO54804 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.66■□□□□ 0.58
ChkaO54804 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ChkaO54804 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ChkaO54804 Reep4-203ENSMUST00000226563 1444 ntBASIC18.66■□□□□ 0.58
ChkaO54804 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
ChkaO54804 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ChkaO54804 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ChkaO54804 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
ChkaO54804 Gm9988-201ENSMUST00000069786 435 ntBASIC18.66■□□□□ 0.58
ChkaO54804 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms