Protein–RNA interactions for Protein: O35491

Clk2, Dual specificity protein kinase CLK2, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk2O35491 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Clk2O35491 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Clk2O35491 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Clk2O35491 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Clk2O35491 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Clk2O35491 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Clk2O35491 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
Clk2O35491 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Clk2O35491 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Clk2O35491 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Clk2O35491 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Clk2O35491 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Clk2O35491 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Clk2O35491 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Clk2O35491 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Clk2O35491 Gm11249-201ENSMUST00000117071 859 ntBASIC20.2■□□□□ 0.82
Clk2O35491 Gm22325-201ENSMUST00000158904 308 ntBASIC20.2■□□□□ 0.82
Clk2O35491 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC20.2■□□□□ 0.82
Clk2O35491 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC20.2■□□□□ 0.82
Clk2O35491 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Clk2O35491 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Clk2O35491 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Clk2O35491 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Clk2O35491 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Clk2O35491 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Clk2O35491 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC20.2■□□□□ 0.82
Clk2O35491 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Clk2O35491 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Clk2O35491 Gm2399-201ENSMUST00000104944 225 ntBASIC20.19■□□□□ 0.82
Clk2O35491 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Clk2O35491 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Clk2O35491 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Clk2O35491 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Clk2O35491 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Clk2O35491 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Clk2O35491 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Clk2O35491 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Clk2O35491 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Clk2O35491 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Clk2O35491 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Clk2O35491 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Clk2O35491 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Clk2O35491 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Clk2O35491 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Clk2O35491 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Clk2O35491 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Clk2O35491 Gm15853-202ENSMUST00000195518 2041 ntBASIC20.17■□□□□ 0.82
Clk2O35491 Gm15847-201ENSMUST00000121417 1065 ntBASIC20.17■□□□□ 0.82
Clk2O35491 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Clk2O35491 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Clk2O35491 Gm21596-201ENSMUST00000178049 1316 ntBASIC20.17■□□□□ 0.82
Clk2O35491 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Clk2O35491 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Clk2O35491 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC20.16■□□□□ 0.82
Clk2O35491 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Clk2O35491 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Clk2O35491 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC20.16■□□□□ 0.82
Clk2O35491 Gm5643-201ENSMUST00000117081 966 ntBASIC20.16■□□□□ 0.82
Clk2O35491 Wnt10b-205ENSMUST00000226846 1204 ntBASIC20.16■□□□□ 0.82
Clk2O35491 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Clk2O35491 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Clk2O35491 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Clk2O35491 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Clk2O35491 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Clk2O35491 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Clk2O35491 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Clk2O35491 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Clk2O35491 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Clk2O35491 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Clk2O35491 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC20.15■□□□□ 0.82
Clk2O35491 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC20.15■□□□□ 0.82
Clk2O35491 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Clk2O35491 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
Clk2O35491 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Clk2O35491 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Clk2O35491 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
Clk2O35491 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Clk2O35491 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Clk2O35491 Gm37805-201ENSMUST00000192612 1094 ntBASIC20.14■□□□□ 0.81
Clk2O35491 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Clk2O35491 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC20.14■□□□□ 0.81
Clk2O35491 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Clk2O35491 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.14■□□□□ 0.81
Clk2O35491 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Clk2O35491 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Clk2O35491 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Clk2O35491 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Clk2O35491 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Clk2O35491 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Clk2O35491 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Clk2O35491 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC20.13■□□□□ 0.81
Clk2O35491 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Clk2O35491 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Clk2O35491 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
Clk2O35491 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Clk2O35491 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Clk2O35491 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Clk2O35491 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Clk2O35491 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Clk2O35491 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms