Protein–RNA interactions for Protein: O08784

Tcof1, Treacle protein, mousemouse

Known RBP Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcof1O08784 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Tcof1O08784 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Tcof1O08784 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Tcof1O08784 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Tcof1O08784 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Tcof1O08784 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Tcof1O08784 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Tcof1O08784 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC21.74■■□□□ 1.07
Tcof1O08784 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Tcof1O08784 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Tcof1O08784 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Tcof1O08784 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Tcof1O08784 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Tcof1O08784 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Tcof1O08784 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.73■■□□□ 1.07
Tcof1O08784 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Tcof1O08784 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Tcof1O08784 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Tcof1O08784 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Tcof1O08784 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Tcof1O08784 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Tcof1O08784 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC21.72■■□□□ 1.07
Tcof1O08784 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Tcof1O08784 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Tcof1O08784 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
Tcof1O08784 Gm12527-201ENSMUST00000117967 564 ntBASIC21.71■■□□□ 1.07
Tcof1O08784 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC21.71■■□□□ 1.07
Tcof1O08784 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Tcof1O08784 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Tcof1O08784 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Tcof1O08784 Rab3c-203ENSMUST00000224180 967 ntBASIC21.71■■□□□ 1.07
Tcof1O08784 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Tcof1O08784 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Tcof1O08784 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Tcof1O08784 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Tcof1O08784 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Tcof1O08784 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Tcof1O08784 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Tcof1O08784 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Tcof1O08784 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Tcof1O08784 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC21.7■■□□□ 1.06
Tcof1O08784 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
Tcof1O08784 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Tcof1O08784 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC21.7■■□□□ 1.06
Tcof1O08784 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC21.7■■□□□ 1.06
Tcof1O08784 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC21.7■■□□□ 1.06
Tcof1O08784 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC21.7■■□□□ 1.06
Tcof1O08784 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Tcof1O08784 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Tcof1O08784 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Tcof1O08784 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Tcof1O08784 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Tcof1O08784 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Tcof1O08784 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Tcof1O08784 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Tcof1O08784 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Tcof1O08784 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Tcof1O08784 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Tcof1O08784 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC21.69■■□□□ 1.06
Tcof1O08784 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Tcof1O08784 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Tcof1O08784 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Tcof1O08784 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC21.69■■□□□ 1.06
Tcof1O08784 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Tcof1O08784 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Tcof1O08784 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Tcof1O08784 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Tcof1O08784 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Tcof1O08784 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Tcof1O08784 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Tcof1O08784 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Tcof1O08784 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Tcof1O08784 Rncr4-201ENSMUST00000194541 2234 ntBASIC21.68■■□□□ 1.06
Tcof1O08784 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Tcof1O08784 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Tcof1O08784 Gm44672-201ENSMUST00000206944 1098 ntBASIC21.68■■□□□ 1.06
Tcof1O08784 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Tcof1O08784 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC21.68■■□□□ 1.06
Tcof1O08784 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Tcof1O08784 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC21.68■■□□□ 1.06
Tcof1O08784 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Tcof1O08784 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Tcof1O08784 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Tcof1O08784 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC21.67■■□□□ 1.06
Tcof1O08784 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Tcof1O08784 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Tcof1O08784 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Tcof1O08784 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC21.67■■□□□ 1.06
Tcof1O08784 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Tcof1O08784 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Tcof1O08784 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Tcof1O08784 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Tcof1O08784 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Tcof1O08784 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Tcof1O08784 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Tcof1O08784 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Tcof1O08784 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Tcof1O08784 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Tcof1O08784 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Tcof1O08784 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms