Protein–RNA interactions for Protein: M0QWN7

Usp35, Ubiquitin-specific peptidase 35, mousemouse

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp35M0QWN7 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp35M0QWN7 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Usp35M0QWN7 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
Usp35M0QWN7 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp35M0QWN7 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp35M0QWN7 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp35M0QWN7 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp35M0QWN7 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp35M0QWN7 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp35M0QWN7 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Usp35M0QWN7 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC19.79■□□□□ 0.76
Usp35M0QWN7 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Usp35M0QWN7 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp35M0QWN7 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp35M0QWN7 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.79■□□□□ 0.76
Usp35M0QWN7 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp35M0QWN7 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp35M0QWN7 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp35M0QWN7 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp35M0QWN7 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Usp35M0QWN7 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp35M0QWN7 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp35M0QWN7 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Usp35M0QWN7 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp35M0QWN7 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp35M0QWN7 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp35M0QWN7 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp35M0QWN7 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp35M0QWN7 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp35M0QWN7 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp35M0QWN7 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp35M0QWN7 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp35M0QWN7 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp35M0QWN7 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp35M0QWN7 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Usp35M0QWN7 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp35M0QWN7 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Usp35M0QWN7 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Usp35M0QWN7 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Usp35M0QWN7 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp35M0QWN7 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.77■□□□□ 0.76
Usp35M0QWN7 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Usp35M0QWN7 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp35M0QWN7 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp35M0QWN7 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Usp35M0QWN7 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp35M0QWN7 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
Usp35M0QWN7 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Usp35M0QWN7 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
Usp35M0QWN7 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp35M0QWN7 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Usp35M0QWN7 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Usp35M0QWN7 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp35M0QWN7 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp35M0QWN7 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Usp35M0QWN7 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Usp35M0QWN7 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.76■□□□□ 0.75
Usp35M0QWN7 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp35M0QWN7 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp35M0QWN7 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Usp35M0QWN7 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp35M0QWN7 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Usp35M0QWN7 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.75■□□□□ 0.75
Usp35M0QWN7 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.75■□□□□ 0.75
Usp35M0QWN7 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Usp35M0QWN7 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.75■□□□□ 0.75
Usp35M0QWN7 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Usp35M0QWN7 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC19.75■□□□□ 0.75
Usp35M0QWN7 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
Usp35M0QWN7 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Usp35M0QWN7 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp35M0QWN7 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp35M0QWN7 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Usp35M0QWN7 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
Usp35M0QWN7 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Usp35M0QWN7 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Usp35M0QWN7 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Usp35M0QWN7 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Usp35M0QWN7 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Usp35M0QWN7 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Usp35M0QWN7 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC19.74■□□□□ 0.75
Usp35M0QWN7 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.74■□□□□ 0.75
Usp35M0QWN7 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Usp35M0QWN7 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.74■□□□□ 0.75
Usp35M0QWN7 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usp35M0QWN7 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usp35M0QWN7 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Usp35M0QWN7 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Usp35M0QWN7 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usp35M0QWN7 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usp35M0QWN7 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
Usp35M0QWN7 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Usp35M0QWN7 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Usp35M0QWN7 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usp35M0QWN7 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usp35M0QWN7 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp35M0QWN7 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp35M0QWN7 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp35M0QWN7 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp35M0QWN7 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms