Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Colca2F8VPY8 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Colca2F8VPY8 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Colca2F8VPY8 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Colca2F8VPY8 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.73■□□□□ 0.43
Colca2F8VPY8 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Colca2F8VPY8 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Colca2F8VPY8 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Colca2F8VPY8 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC17.73■□□□□ 0.43
Colca2F8VPY8 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Colca2F8VPY8 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Colca2F8VPY8 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Colca2F8VPY8 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.72■□□□□ 0.43
Colca2F8VPY8 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.72■□□□□ 0.43
Colca2F8VPY8 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Colca2F8VPY8 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Colca2F8VPY8 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Colca2F8VPY8 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Colca2F8VPY8 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Colca2F8VPY8 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Colca2F8VPY8 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Colca2F8VPY8 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Colca2F8VPY8 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Colca2F8VPY8 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Colca2F8VPY8 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Colca2F8VPY8 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Colca2F8VPY8 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Colca2F8VPY8 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
Colca2F8VPY8 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Colca2F8VPY8 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Colca2F8VPY8 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Colca2F8VPY8 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.71■□□□□ 0.43
Colca2F8VPY8 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Colca2F8VPY8 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Colca2F8VPY8 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Colca2F8VPY8 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Colca2F8VPY8 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Colca2F8VPY8 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Colca2F8VPY8 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Colca2F8VPY8 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Colca2F8VPY8 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Colca2F8VPY8 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Colca2F8VPY8 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Colca2F8VPY8 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Colca2F8VPY8 Gm23634-201ENSMUST00000175071 91 ntBASIC17.7■□□□□ 0.42
Colca2F8VPY8 Gm27741-201ENSMUST00000185060 237 ntBASIC17.7■□□□□ 0.42
Colca2F8VPY8 Gm10517-202ENSMUST00000192970 758 ntBASIC17.7■□□□□ 0.42
Colca2F8VPY8 Gm18959-201ENSMUST00000208954 655 ntBASIC17.7■□□□□ 0.42
Colca2F8VPY8 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.7■□□□□ 0.42
Colca2F8VPY8 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Colca2F8VPY8 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Colca2F8VPY8 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Colca2F8VPY8 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Colca2F8VPY8 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Colca2F8VPY8 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Colca2F8VPY8 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Colca2F8VPY8 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.69■□□□□ 0.42
Colca2F8VPY8 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.69■□□□□ 0.42
Colca2F8VPY8 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Colca2F8VPY8 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
Colca2F8VPY8 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.69■□□□□ 0.42
Colca2F8VPY8 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.69■□□□□ 0.42
Colca2F8VPY8 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Colca2F8VPY8 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Colca2F8VPY8 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Colca2F8VPY8 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.69■□□□□ 0.42
Colca2F8VPY8 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Colca2F8VPY8 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Colca2F8VPY8 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Colca2F8VPY8 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Colca2F8VPY8 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Colca2F8VPY8 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.68■□□□□ 0.42
Colca2F8VPY8 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Colca2F8VPY8 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.68■□□□□ 0.42
Colca2F8VPY8 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Colca2F8VPY8 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.68■□□□□ 0.42
Colca2F8VPY8 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Colca2F8VPY8 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Colca2F8VPY8 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Colca2F8VPY8 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Colca2F8VPY8 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Colca2F8VPY8 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.67■□□□□ 0.42
Colca2F8VPY8 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC17.67■□□□□ 0.42
Colca2F8VPY8 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Colca2F8VPY8 Gm18032-201ENSMUST00000222541 538 ntBASIC17.67■□□□□ 0.42
Colca2F8VPY8 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Colca2F8VPY8 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.67■□□□□ 0.42
Colca2F8VPY8 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.67■□□□□ 0.42
Colca2F8VPY8 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Colca2F8VPY8 Gm13042-201ENSMUST00000119244 1955 ntBASIC17.66■□□□□ 0.42
Colca2F8VPY8 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Colca2F8VPY8 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Colca2F8VPY8 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Colca2F8VPY8 Gm10013-201ENSMUST00000106074 672 ntBASIC17.66■□□□□ 0.42
Colca2F8VPY8 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Colca2F8VPY8 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Colca2F8VPY8 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Colca2F8VPY8 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Colca2F8VPY8 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Colca2F8VPY8 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms