Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Hfm1D3Z4R1 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC26.31■■□□□ 1.8
Hfm1D3Z4R1 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Hfm1D3Z4R1 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Hfm1D3Z4R1 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Hfm1D3Z4R1 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Hfm1D3Z4R1 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Hfm1D3Z4R1 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Hfm1D3Z4R1 Gm6728-201ENSMUST00000178117 1065 ntBASIC26.3■■□□□ 1.8
Hfm1D3Z4R1 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC26.3■■□□□ 1.8
Hfm1D3Z4R1 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
Hfm1D3Z4R1 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
Hfm1D3Z4R1 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC26.29■■□□□ 1.8
Hfm1D3Z4R1 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Hfm1D3Z4R1 Gm27741-201ENSMUST00000185060 237 ntBASIC26.29■■□□□ 1.8
Hfm1D3Z4R1 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Hfm1D3Z4R1 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Hfm1D3Z4R1 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Hfm1D3Z4R1 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC26.28■■□□□ 1.8
Hfm1D3Z4R1 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Hfm1D3Z4R1 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Hfm1D3Z4R1 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC26.28■■□□□ 1.8
Hfm1D3Z4R1 Gm10517-202ENSMUST00000192970 758 ntBASIC26.28■■□□□ 1.8
Hfm1D3Z4R1 Gm18032-201ENSMUST00000222541 538 ntBASIC26.28■■□□□ 1.8
Hfm1D3Z4R1 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Hfm1D3Z4R1 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
Hfm1D3Z4R1 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Hfm1D3Z4R1 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
Hfm1D3Z4R1 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
Hfm1D3Z4R1 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
Hfm1D3Z4R1 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Hfm1D3Z4R1 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Hfm1D3Z4R1 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
Hfm1D3Z4R1 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
Hfm1D3Z4R1 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Hfm1D3Z4R1 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
Hfm1D3Z4R1 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Hfm1D3Z4R1 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
Hfm1D3Z4R1 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
Hfm1D3Z4R1 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Hfm1D3Z4R1 Mir6349-201ENSMUST00000184059 97 ntBASIC26.26■■□□□ 1.79
Hfm1D3Z4R1 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC26.26■■□□□ 1.79
Hfm1D3Z4R1 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC26.26■■□□□ 1.79
Hfm1D3Z4R1 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Hfm1D3Z4R1 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Hfm1D3Z4R1 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Hfm1D3Z4R1 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
Hfm1D3Z4R1 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
Hfm1D3Z4R1 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Hfm1D3Z4R1 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC26.25■■□□□ 1.79
Hfm1D3Z4R1 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
Hfm1D3Z4R1 Gm23634-201ENSMUST00000175071 91 ntBASIC26.25■■□□□ 1.79
Hfm1D3Z4R1 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Hfm1D3Z4R1 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
Hfm1D3Z4R1 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Hfm1D3Z4R1 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Hfm1D3Z4R1 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Hfm1D3Z4R1 Gm38160-201ENSMUST00000193090 2499 ntBASIC26.25■■□□□ 1.79
Hfm1D3Z4R1 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Hfm1D3Z4R1 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Hfm1D3Z4R1 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Hfm1D3Z4R1 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC26.24■■□□□ 1.79
Hfm1D3Z4R1 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC26.24■■□□□ 1.79
Hfm1D3Z4R1 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
Hfm1D3Z4R1 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Hfm1D3Z4R1 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Hfm1D3Z4R1 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC26.23■■□□□ 1.79
Hfm1D3Z4R1 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Hfm1D3Z4R1 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
Hfm1D3Z4R1 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
Hfm1D3Z4R1 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
Hfm1D3Z4R1 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC26.22■■□□□ 1.79
Hfm1D3Z4R1 Gm6345-202ENSMUST00000180900 204 ntBASIC26.22■■□□□ 1.79
Hfm1D3Z4R1 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Hfm1D3Z4R1 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
Hfm1D3Z4R1 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
Hfm1D3Z4R1 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Hfm1D3Z4R1 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Hfm1D3Z4R1 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Hfm1D3Z4R1 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Hfm1D3Z4R1 AC166341.7-201ENSMUST00000221698 126 ntBASIC26.22■■□□□ 1.79
Hfm1D3Z4R1 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Hfm1D3Z4R1 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Hfm1D3Z4R1 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC26.21■■□□□ 1.79
Hfm1D3Z4R1 Gm18959-201ENSMUST00000208954 655 ntBASIC26.21■■□□□ 1.79
Hfm1D3Z4R1 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC26.21■■□□□ 1.79
Hfm1D3Z4R1 AC159205.6-201ENSMUST00000224935 887 ntBASIC26.21■■□□□ 1.79
Hfm1D3Z4R1 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Hfm1D3Z4R1 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC26.2■■□□□ 1.78
Hfm1D3Z4R1 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Hfm1D3Z4R1 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.78
Hfm1D3Z4R1 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC26.2■■□□□ 1.78
Hfm1D3Z4R1 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Hfm1D3Z4R1 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Hfm1D3Z4R1 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC26.19■■□□□ 1.78
Hfm1D3Z4R1 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
Hfm1D3Z4R1 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC26.19■■□□□ 1.78
Hfm1D3Z4R1 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Hfm1D3Z4R1 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Hfm1D3Z4R1 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms