Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shank1D3YZU1 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Shank1D3YZU1 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Shank1D3YZU1 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shank1D3YZU1 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Shank1D3YZU1 Gm13042-201ENSMUST00000119244 1955 ntBASIC16.59■□□□□ 0.25
Shank1D3YZU1 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Shank1D3YZU1 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
Shank1D3YZU1 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.58■□□□□ 0.25
Shank1D3YZU1 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC16.58■□□□□ 0.24
Shank1D3YZU1 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Shank1D3YZU1 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Shank1D3YZU1 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Shank1D3YZU1 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Shank1D3YZU1 Gm11927-201ENSMUST00000118472 759 ntBASIC16.58■□□□□ 0.24
Shank1D3YZU1 Gm21362-201ENSMUST00000194272 928 ntBASIC16.58■□□□□ 0.24
Shank1D3YZU1 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC16.58■□□□□ 0.24
Shank1D3YZU1 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Shank1D3YZU1 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Shank1D3YZU1 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Shank1D3YZU1 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Shank1D3YZU1 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Shank1D3YZU1 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Shank1D3YZU1 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Shank1D3YZU1 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Shank1D3YZU1 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.57■□□□□ 0.24
Shank1D3YZU1 Gm27741-201ENSMUST00000185060 237 ntBASIC16.57■□□□□ 0.24
Shank1D3YZU1 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Shank1D3YZU1 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Shank1D3YZU1 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Shank1D3YZU1 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Shank1D3YZU1 Gm7889-201ENSMUST00000185591 958 ntBASIC16.57■□□□□ 0.24
Shank1D3YZU1 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Shank1D3YZU1 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
Shank1D3YZU1 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Shank1D3YZU1 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Shank1D3YZU1 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Shank1D3YZU1 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Shank1D3YZU1 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Shank1D3YZU1 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Shank1D3YZU1 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Shank1D3YZU1 Gm6728-201ENSMUST00000178117 1065 ntBASIC16.56■□□□□ 0.24
Shank1D3YZU1 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC16.56■□□□□ 0.24
Shank1D3YZU1 Gm10459-201ENSMUST00000202708 1155 ntBASIC16.56■□□□□ 0.24
Shank1D3YZU1 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Shank1D3YZU1 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Shank1D3YZU1 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Shank1D3YZU1 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Shank1D3YZU1 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Shank1D3YZU1 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Shank1D3YZU1 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Shank1D3YZU1 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Shank1D3YZU1 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Shank1D3YZU1 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Shank1D3YZU1 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Shank1D3YZU1 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC16.55■□□□□ 0.24
Shank1D3YZU1 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Shank1D3YZU1 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Shank1D3YZU1 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.55■□□□□ 0.24
Shank1D3YZU1 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.55■□□□□ 0.24
Shank1D3YZU1 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Shank1D3YZU1 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Shank1D3YZU1 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Shank1D3YZU1 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Shank1D3YZU1 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Shank1D3YZU1 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Shank1D3YZU1 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Shank1D3YZU1 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC16.55■□□□□ 0.24
Shank1D3YZU1 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
Shank1D3YZU1 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC16.55■□□□□ 0.24
Shank1D3YZU1 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC16.55■□□□□ 0.24
Shank1D3YZU1 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Shank1D3YZU1 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Shank1D3YZU1 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Shank1D3YZU1 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Shank1D3YZU1 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Shank1D3YZU1 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Shank1D3YZU1 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Shank1D3YZU1 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Shank1D3YZU1 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Shank1D3YZU1 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC16.54■□□□□ 0.24
Shank1D3YZU1 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Shank1D3YZU1 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Shank1D3YZU1 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Shank1D3YZU1 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Shank1D3YZU1 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Shank1D3YZU1 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Shank1D3YZU1 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Shank1D3YZU1 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
Shank1D3YZU1 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Shank1D3YZU1 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC16.54■□□□□ 0.24
Shank1D3YZU1 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Shank1D3YZU1 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shank1D3YZU1 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Shank1D3YZU1 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shank1D3YZU1 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shank1D3YZU1 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shank1D3YZU1 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
Shank1D3YZU1 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.53■□□□□ 0.24
Shank1D3YZU1 Gm11539-201ENSMUST00000119837 557 ntBASIC16.53■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms