Protein–RNA interactions for Protein: B9EKX1

Ptchd4, Patched domain-containing protein 4, mousemouse

Predictions only

Length 904 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd4B9EKX1 Gm29241-201ENSMUST00000189260 1096 ntBASIC19.98■□□□□ 0.79
Ptchd4B9EKX1 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC19.98■□□□□ 0.79
Ptchd4B9EKX1 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ptchd4B9EKX1 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ptchd4B9EKX1 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC19.98■□□□□ 0.79
Ptchd4B9EKX1 Notumos-201ENSMUST00000151998 2659 ntBASIC19.98■□□□□ 0.79
Ptchd4B9EKX1 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Ptchd4B9EKX1 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ptchd4B9EKX1 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ptchd4B9EKX1 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ptchd4B9EKX1 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ptchd4B9EKX1 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
Ptchd4B9EKX1 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ptchd4B9EKX1 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC19.97■□□□□ 0.79
Ptchd4B9EKX1 Gm15378-201ENSMUST00000121894 207 ntBASIC19.97■□□□□ 0.79
Ptchd4B9EKX1 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC19.97■□□□□ 0.79
Ptchd4B9EKX1 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Ptchd4B9EKX1 H2-K2-201ENSMUST00000174250 1049 ntBASIC19.97■□□□□ 0.79
Ptchd4B9EKX1 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC19.97■□□□□ 0.79
Ptchd4B9EKX1 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ptchd4B9EKX1 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ptchd4B9EKX1 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ptchd4B9EKX1 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Ptchd4B9EKX1 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ptchd4B9EKX1 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ptchd4B9EKX1 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ptchd4B9EKX1 Mir7071-201ENSMUST00000184847 69 ntBASIC19.96■□□□□ 0.79
Ptchd4B9EKX1 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC19.96■□□□□ 0.79
Ptchd4B9EKX1 AC153881.1-201ENSMUST00000214448 284 ntBASIC19.96■□□□□ 0.79
Ptchd4B9EKX1 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.96■□□□□ 0.79
Ptchd4B9EKX1 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ptchd4B9EKX1 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Ptchd4B9EKX1 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ptchd4B9EKX1 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ptchd4B9EKX1 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC19.95■□□□□ 0.79
Ptchd4B9EKX1 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ptchd4B9EKX1 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ptchd4B9EKX1 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Ptchd4B9EKX1 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ptchd4B9EKX1 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ptchd4B9EKX1 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.95■□□□□ 0.78
Ptchd4B9EKX1 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ptchd4B9EKX1 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Ptchd4B9EKX1 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ptchd4B9EKX1 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ptchd4B9EKX1 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ptchd4B9EKX1 Gm22325-201ENSMUST00000158904 308 ntBASIC19.95■□□□□ 0.78
Ptchd4B9EKX1 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.95■□□□□ 0.78
Ptchd4B9EKX1 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ptchd4B9EKX1 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ptchd4B9EKX1 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ptchd4B9EKX1 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ptchd4B9EKX1 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ptchd4B9EKX1 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ptchd4B9EKX1 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ptchd4B9EKX1 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ptchd4B9EKX1 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ptchd4B9EKX1 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ptchd4B9EKX1 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ptchd4B9EKX1 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ptchd4B9EKX1 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ptchd4B9EKX1 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ptchd4B9EKX1 Alkbh1-212ENSMUST00000185301 408 ntBASIC19.93■□□□□ 0.78
Ptchd4B9EKX1 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC19.93■□□□□ 0.78
Ptchd4B9EKX1 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ptchd4B9EKX1 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ptchd4B9EKX1 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Ptchd4B9EKX1 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ptchd4B9EKX1 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Ptchd4B9EKX1 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ptchd4B9EKX1 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ptchd4B9EKX1 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ptchd4B9EKX1 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.92■□□□□ 0.78
Ptchd4B9EKX1 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ptchd4B9EKX1 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.92■□□□□ 0.78
Ptchd4B9EKX1 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ptchd4B9EKX1 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
Ptchd4B9EKX1 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ptchd4B9EKX1 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC19.92■□□□□ 0.78
Ptchd4B9EKX1 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC19.92■□□□□ 0.78
Ptchd4B9EKX1 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Ptchd4B9EKX1 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ptchd4B9EKX1 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ptchd4B9EKX1 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.91■□□□□ 0.78
Ptchd4B9EKX1 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ptchd4B9EKX1 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ptchd4B9EKX1 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ptchd4B9EKX1 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC19.91■□□□□ 0.78
Ptchd4B9EKX1 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ptchd4B9EKX1 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC19.91■□□□□ 0.78
Ptchd4B9EKX1 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Ptchd4B9EKX1 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Ptchd4B9EKX1 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Ptchd4B9EKX1 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ptchd4B9EKX1 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ptchd4B9EKX1 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ptchd4B9EKX1 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ptchd4B9EKX1 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ptchd4B9EKX1 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ptchd4B9EKX1 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms