Protein–RNA interactions for Protein: A6BLY7

Krt28, Keratin, type I cytoskeletal 28, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt28A6BLY7 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Krt28A6BLY7 Gm15375-201ENSMUST00000119510 849 ntBASIC20.65■□□□□ 0.9
Krt28A6BLY7 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Krt28A6BLY7 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Krt28A6BLY7 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC20.65■□□□□ 0.9
Krt28A6BLY7 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC20.65■□□□□ 0.9
Krt28A6BLY7 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Krt28A6BLY7 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Krt28A6BLY7 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Krt28A6BLY7 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
Krt28A6BLY7 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Krt28A6BLY7 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
Krt28A6BLY7 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC20.64■□□□□ 0.89
Krt28A6BLY7 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC20.64■□□□□ 0.89
Krt28A6BLY7 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC20.64■□□□□ 0.89
Krt28A6BLY7 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC20.64■□□□□ 0.89
Krt28A6BLY7 Gm3375-201ENSMUST00000203929 796 ntBASIC20.64■□□□□ 0.89
Krt28A6BLY7 Otx2os1-204ENSMUST00000227221 751 ntBASIC20.64■□□□□ 0.89
Krt28A6BLY7 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Krt28A6BLY7 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Krt28A6BLY7 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Krt28A6BLY7 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Krt28A6BLY7 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Krt28A6BLY7 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Krt28A6BLY7 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Krt28A6BLY7 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Krt28A6BLY7 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC20.63■□□□□ 0.89
Krt28A6BLY7 Gm23634-201ENSMUST00000175071 91 ntBASIC20.63■□□□□ 0.89
Krt28A6BLY7 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Krt28A6BLY7 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC20.63■□□□□ 0.89
Krt28A6BLY7 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Krt28A6BLY7 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Krt28A6BLY7 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.63■□□□□ 0.89
Krt28A6BLY7 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Krt28A6BLY7 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Krt28A6BLY7 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Krt28A6BLY7 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Krt28A6BLY7 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Krt28A6BLY7 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Krt28A6BLY7 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Krt28A6BLY7 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Krt28A6BLY7 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Krt28A6BLY7 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC20.62■□□□□ 0.89
Krt28A6BLY7 Gm37292-201ENSMUST00000192062 758 ntBASIC20.62■□□□□ 0.89
Krt28A6BLY7 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.62■□□□□ 0.89
Krt28A6BLY7 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Krt28A6BLY7 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Krt28A6BLY7 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Krt28A6BLY7 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Krt28A6BLY7 Gm45560-201ENSMUST00000211492 1472 ntBASIC20.62■□□□□ 0.89
Krt28A6BLY7 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.62■□□□□ 0.89
Krt28A6BLY7 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Krt28A6BLY7 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Krt28A6BLY7 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Krt28A6BLY7 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Krt28A6BLY7 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Krt28A6BLY7 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Krt28A6BLY7 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Krt28A6BLY7 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Krt28A6BLY7 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Krt28A6BLY7 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Krt28A6BLY7 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC20.6■□□□□ 0.89
Krt28A6BLY7 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC20.6■□□□□ 0.89
Krt28A6BLY7 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Krt28A6BLY7 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Krt28A6BLY7 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Krt28A6BLY7 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Krt28A6BLY7 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Krt28A6BLY7 Gm18959-201ENSMUST00000208954 655 ntBASIC20.59■□□□□ 0.89
Krt28A6BLY7 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Krt28A6BLY7 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Krt28A6BLY7 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Krt28A6BLY7 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Krt28A6BLY7 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.59■□□□□ 0.89
Krt28A6BLY7 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Krt28A6BLY7 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Krt28A6BLY7 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.59■□□□□ 0.89
Krt28A6BLY7 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Krt28A6BLY7 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Krt28A6BLY7 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Krt28A6BLY7 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Krt28A6BLY7 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Krt28A6BLY7 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.58■□□□□ 0.89
Krt28A6BLY7 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Krt28A6BLY7 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Krt28A6BLY7 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
Krt28A6BLY7 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Krt28A6BLY7 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC20.58■□□□□ 0.88
Krt28A6BLY7 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Krt28A6BLY7 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Krt28A6BLY7 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Krt28A6BLY7 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Krt28A6BLY7 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Krt28A6BLY7 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
Krt28A6BLY7 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Krt28A6BLY7 Gm10013-201ENSMUST00000106074 672 ntBASIC20.57■□□□□ 0.88
Krt28A6BLY7 AA414768-201ENSMUST00000121924 1257 ntBASIC20.57■□□□□ 0.88
Krt28A6BLY7 Gm12382-201ENSMUST00000122005 922 ntBASIC20.57■□□□□ 0.88
Krt28A6BLY7 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC20.57■□□□□ 0.88
Krt28A6BLY7 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms