Protein–RNA interactions for Protein: A0A0B4J1J9

Trav11, T cell receptor alpha variable 11 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav11A0A0B4J1J9 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav11A0A0B4J1J9 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav11A0A0B4J1J9 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav11A0A0B4J1J9 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav11A0A0B4J1J9 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trav11A0A0B4J1J9 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav11A0A0B4J1J9 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav11A0A0B4J1J9 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav11A0A0B4J1J9 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav11A0A0B4J1J9 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav11A0A0B4J1J9 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav11A0A0B4J1J9 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav11A0A0B4J1J9 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav11A0A0B4J1J9 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trav11A0A0B4J1J9 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trav11A0A0B4J1J9 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav11A0A0B4J1J9 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav11A0A0B4J1J9 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC12.74□□□□□ -0.37
Trav11A0A0B4J1J9 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC12.74□□□□□ -0.37
Trav11A0A0B4J1J9 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC12.74□□□□□ -0.37
Trav11A0A0B4J1J9 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav11A0A0B4J1J9 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC12.74□□□□□ -0.37
Trav11A0A0B4J1J9 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav11A0A0B4J1J9 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav11A0A0B4J1J9 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Trav11A0A0B4J1J9 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav11A0A0B4J1J9 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav11A0A0B4J1J9 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav11A0A0B4J1J9 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav11A0A0B4J1J9 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav11A0A0B4J1J9 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trav11A0A0B4J1J9 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav11A0A0B4J1J9 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav11A0A0B4J1J9 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav11A0A0B4J1J9 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav11A0A0B4J1J9 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav11A0A0B4J1J9 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC12.73□□□□□ -0.37
Trav11A0A0B4J1J9 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav11A0A0B4J1J9 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trav11A0A0B4J1J9 Ddx41-204ENSMUST00000224765 2199 ntBASIC12.73□□□□□ -0.37
Trav11A0A0B4J1J9 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav11A0A0B4J1J9 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav11A0A0B4J1J9 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav11A0A0B4J1J9 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav11A0A0B4J1J9 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav11A0A0B4J1J9 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav11A0A0B4J1J9 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav11A0A0B4J1J9 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trav11A0A0B4J1J9 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC12.73□□□□□ -0.37
Trav11A0A0B4J1J9 Gm15853-202ENSMUST00000195518 2041 ntBASIC12.72□□□□□ -0.37
Trav11A0A0B4J1J9 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav11A0A0B4J1J9 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC12.72□□□□□ -0.37
Trav11A0A0B4J1J9 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Trav11A0A0B4J1J9 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC12.72□□□□□ -0.37
Trav11A0A0B4J1J9 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav11A0A0B4J1J9 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav11A0A0B4J1J9 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC12.72□□□□□ -0.37
Trav11A0A0B4J1J9 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav11A0A0B4J1J9 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Trav11A0A0B4J1J9 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC12.72□□□□□ -0.37
Trav11A0A0B4J1J9 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC12.72□□□□□ -0.37
Trav11A0A0B4J1J9 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav11A0A0B4J1J9 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav11A0A0B4J1J9 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav11A0A0B4J1J9 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav11A0A0B4J1J9 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav11A0A0B4J1J9 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC12.72□□□□□ -0.37
Trav11A0A0B4J1J9 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav11A0A0B4J1J9 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav11A0A0B4J1J9 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav11A0A0B4J1J9 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav11A0A0B4J1J9 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav11A0A0B4J1J9 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Trav11A0A0B4J1J9 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Trav11A0A0B4J1J9 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav11A0A0B4J1J9 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav11A0A0B4J1J9 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav11A0A0B4J1J9 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC12.71□□□□□ -0.37
Trav11A0A0B4J1J9 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav11A0A0B4J1J9 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav11A0A0B4J1J9 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav11A0A0B4J1J9 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav11A0A0B4J1J9 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav11A0A0B4J1J9 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC12.71□□□□□ -0.38
Trav11A0A0B4J1J9 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav11A0A0B4J1J9 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Trav11A0A0B4J1J9 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav11A0A0B4J1J9 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav11A0A0B4J1J9 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav11A0A0B4J1J9 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav11A0A0B4J1J9 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav11A0A0B4J1J9 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav11A0A0B4J1J9 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC12.7□□□□□ -0.38
Trav11A0A0B4J1J9 Gm15546-201ENSMUST00000122095 826 ntBASIC12.7□□□□□ -0.38
Trav11A0A0B4J1J9 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC12.7□□□□□ -0.38
Trav11A0A0B4J1J9 Gm9959-201ENSMUST00000068277 390 ntBASIC12.7□□□□□ -0.38
Trav11A0A0B4J1J9 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav11A0A0B4J1J9 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav11A0A0B4J1J9 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav11A0A0B4J1J9 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms