Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6-1A0A075B5Z8 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Trav6-1A0A075B5Z8 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6-1A0A075B5Z8 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
Trav6-1A0A075B5Z8 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6-1A0A075B5Z8 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6-1A0A075B5Z8 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6-1A0A075B5Z8 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6-1A0A075B5Z8 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Trav6-1A0A075B5Z8 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6-1A0A075B5Z8 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC14.89□□□□□ -0.03
Trav6-1A0A075B5Z8 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6-1A0A075B5Z8 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6-1A0A075B5Z8 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6-1A0A075B5Z8 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6-1A0A075B5Z8 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC14.89□□□□□ -0.03
Trav6-1A0A075B5Z8 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6-1A0A075B5Z8 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6-1A0A075B5Z8 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6-1A0A075B5Z8 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6-1A0A075B5Z8 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6-1A0A075B5Z8 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6-1A0A075B5Z8 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6-1A0A075B5Z8 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6-1A0A075B5Z8 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Trav6-1A0A075B5Z8 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6-1A0A075B5Z8 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6-1A0A075B5Z8 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6-1A0A075B5Z8 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6-1A0A075B5Z8 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6-1A0A075B5Z8 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6-1A0A075B5Z8 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6-1A0A075B5Z8 Gm43702-201ENSMUST00000198772 2546 ntBASIC14.88□□□□□ -0.03
Trav6-1A0A075B5Z8 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6-1A0A075B5Z8 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6-1A0A075B5Z8 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6-1A0A075B5Z8 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6-1A0A075B5Z8 Gm27801-201ENSMUST00000184174 223 ntBASIC14.88□□□□□ -0.03
Trav6-1A0A075B5Z8 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Trav6-1A0A075B5Z8 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Trav6-1A0A075B5Z8 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6-1A0A075B5Z8 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6-1A0A075B5Z8 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6-1A0A075B5Z8 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6-1A0A075B5Z8 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6-1A0A075B5Z8 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Trav6-1A0A075B5Z8 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6-1A0A075B5Z8 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6-1A0A075B5Z8 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Trav6-1A0A075B5Z8 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Trav6-1A0A075B5Z8 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6-1A0A075B5Z8 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6-1A0A075B5Z8 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6-1A0A075B5Z8 Gm9194-201ENSMUST00000220749 1447 ntBASIC14.87□□□□□ -0.03
Trav6-1A0A075B5Z8 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6-1A0A075B5Z8 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6-1A0A075B5Z8 Gm12251-201ENSMUST00000117893 792 ntBASIC14.87□□□□□ -0.03
Trav6-1A0A075B5Z8 Gm11421-201ENSMUST00000122124 294 ntBASIC14.87□□□□□ -0.03
Trav6-1A0A075B5Z8 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6-1A0A075B5Z8 Gm27032-201ENSMUST00000183124 1116 ntBASIC14.87□□□□□ -0.03
Trav6-1A0A075B5Z8 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC14.87□□□□□ -0.03
Trav6-1A0A075B5Z8 Gm43137-201ENSMUST00000198052 594 ntBASIC14.87□□□□□ -0.03
Trav6-1A0A075B5Z8 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6-1A0A075B5Z8 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6-1A0A075B5Z8 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6-1A0A075B5Z8 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6-1A0A075B5Z8 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
Trav6-1A0A075B5Z8 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC14.87□□□□□ -0.03
Trav6-1A0A075B5Z8 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6-1A0A075B5Z8 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6-1A0A075B5Z8 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6-1A0A075B5Z8 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6-1A0A075B5Z8 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6-1A0A075B5Z8 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Trav6-1A0A075B5Z8 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Trav6-1A0A075B5Z8 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6-1A0A075B5Z8 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6-1A0A075B5Z8 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
Trav6-1A0A075B5Z8 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6-1A0A075B5Z8 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC14.86□□□□□ -0.03
Trav6-1A0A075B5Z8 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC14.86□□□□□ -0.03
Trav6-1A0A075B5Z8 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC14.86□□□□□ -0.03
Trav6-1A0A075B5Z8 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC14.86□□□□□ -0.03
Trav6-1A0A075B5Z8 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Trav6-1A0A075B5Z8 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Trav6-1A0A075B5Z8 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6-1A0A075B5Z8 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
Trav6-1A0A075B5Z8 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6-1A0A075B5Z8 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6-1A0A075B5Z8 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6-1A0A075B5Z8 Gm19439-201ENSMUST00000198195 2273 ntBASIC14.86□□□□□ -0.03
Trav6-1A0A075B5Z8 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6-1A0A075B5Z8 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6-1A0A075B5Z8 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6-1A0A075B5Z8 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6-1A0A075B5Z8 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6-1A0A075B5Z8 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6-1A0A075B5Z8 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6-1A0A075B5Z8 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6-1A0A075B5Z8 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms