Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC15.94■□□□□ 0.14
Trav5-1A0A075B5Z7 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav5-1A0A075B5Z7 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav5-1A0A075B5Z7 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Trav5-1A0A075B5Z7 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav5-1A0A075B5Z7 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav5-1A0A075B5Z7 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav5-1A0A075B5Z7 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav5-1A0A075B5Z7 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav5-1A0A075B5Z7 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav5-1A0A075B5Z7 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav5-1A0A075B5Z7 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav5-1A0A075B5Z7 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav5-1A0A075B5Z7 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav5-1A0A075B5Z7 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav5-1A0A075B5Z7 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Trav5-1A0A075B5Z7 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Trav5-1A0A075B5Z7 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC15.93■□□□□ 0.14
Trav5-1A0A075B5Z7 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trav5-1A0A075B5Z7 Hsf1-204ENSMUST00000226872 2104 ntBASIC15.93■□□□□ 0.14
Trav5-1A0A075B5Z7 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav5-1A0A075B5Z7 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Trav5-1A0A075B5Z7 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav5-1A0A075B5Z7 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trav5-1A0A075B5Z7 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC15.93■□□□□ 0.14
Trav5-1A0A075B5Z7 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav5-1A0A075B5Z7 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav5-1A0A075B5Z7 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav5-1A0A075B5Z7 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav5-1A0A075B5Z7 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav5-1A0A075B5Z7 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav5-1A0A075B5Z7 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trav5-1A0A075B5Z7 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav5-1A0A075B5Z7 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
Trav5-1A0A075B5Z7 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav5-1A0A075B5Z7 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
Trav5-1A0A075B5Z7 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Trav5-1A0A075B5Z7 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav5-1A0A075B5Z7 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC15.92■□□□□ 0.14
Trav5-1A0A075B5Z7 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav5-1A0A075B5Z7 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trav5-1A0A075B5Z7 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav5-1A0A075B5Z7 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav5-1A0A075B5Z7 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav5-1A0A075B5Z7 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav5-1A0A075B5Z7 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav5-1A0A075B5Z7 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC15.92■□□□□ 0.14
Trav5-1A0A075B5Z7 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trav5-1A0A075B5Z7 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav5-1A0A075B5Z7 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC15.92■□□□□ 0.14
Trav5-1A0A075B5Z7 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trav5-1A0A075B5Z7 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav5-1A0A075B5Z7 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav5-1A0A075B5Z7 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav5-1A0A075B5Z7 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav5-1A0A075B5Z7 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trav5-1A0A075B5Z7 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trav5-1A0A075B5Z7 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC15.91■□□□□ 0.14
Trav5-1A0A075B5Z7 Gm20760-201ENSMUST00000179197 648 ntBASIC15.91■□□□□ 0.14
Trav5-1A0A075B5Z7 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC15.91■□□□□ 0.14
Trav5-1A0A075B5Z7 Gm44549-201ENSMUST00000208351 577 ntBASIC15.91■□□□□ 0.14
Trav5-1A0A075B5Z7 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav5-1A0A075B5Z7 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav5-1A0A075B5Z7 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav5-1A0A075B5Z7 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav5-1A0A075B5Z7 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav5-1A0A075B5Z7 Gm8309-201ENSMUST00000206627 1448 ntBASIC15.91■□□□□ 0.14
Trav5-1A0A075B5Z7 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav5-1A0A075B5Z7 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav5-1A0A075B5Z7 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Trav5-1A0A075B5Z7 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Trav5-1A0A075B5Z7 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav5-1A0A075B5Z7 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trav5-1A0A075B5Z7 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav5-1A0A075B5Z7 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trav5-1A0A075B5Z7 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trav5-1A0A075B5Z7 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Trav5-1A0A075B5Z7 Gm20049-201ENSMUST00000219950 730 ntBASIC15.9■□□□□ 0.14
Trav5-1A0A075B5Z7 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav5-1A0A075B5Z7 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Trav5-1A0A075B5Z7 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC15.9■□□□□ 0.14
Trav5-1A0A075B5Z7 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav5-1A0A075B5Z7 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav5-1A0A075B5Z7 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav5-1A0A075B5Z7 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav5-1A0A075B5Z7 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav5-1A0A075B5Z7 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trav5-1A0A075B5Z7 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC15.89■□□□□ 0.13
Trav5-1A0A075B5Z7 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav5-1A0A075B5Z7 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav5-1A0A075B5Z7 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trav5-1A0A075B5Z7 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav5-1A0A075B5Z7 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trav5-1A0A075B5Z7 Gm2559-201ENSMUST00000201323 363 ntBASIC15.89■□□□□ 0.13
Trav5-1A0A075B5Z7 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Trav5-1A0A075B5Z7 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Trav5-1A0A075B5Z7 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav5-1A0A075B5Z7 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC15.89■□□□□ 0.13
Trav5-1A0A075B5Z7 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav5-1A0A075B5Z7 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms