Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC9.82□□□□□ -0.84
Ube3bQ9ES34 Gm15709-201ENSMUST00000118354 213 ntBASIC9.82□□□□□ -0.84
Ube3bQ9ES34 Olfr1103-ps1-201ENSMUST00000119132 937 ntBASIC9.82□□□□□ -0.84
Ube3bQ9ES34 4930587A21Rik-201ENSMUST00000128588 851 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Ube3bQ9ES34 Gm15859-201ENSMUST00000132069 710 ntTSL 5 BASIC9.82□□□□□ -0.84
Ube3bQ9ES34 Lypd8-201ENSMUST00000013787 1093 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ube3bQ9ES34 Apela-202ENSMUST00000142822 975 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ube3bQ9ES34 Gm17188-202ENSMUST00000165178 680 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Ube3bQ9ES34 Lrrc32-201ENSMUST00000165205 3817 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Ube3bQ9ES34 Defa27-201ENSMUST00000167683 282 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ube3bQ9ES34 Cldn34c1-206ENSMUST00000169445 705 ntAPPRIS P3 TSL 5 BASIC9.82□□□□□ -0.84
Ube3bQ9ES34 Gm24083-201ENSMUST00000175174 120 ntBASIC9.82□□□□□ -0.84
Ube3bQ9ES34 Gm20617-201ENSMUST00000177082 717 ntTSL 3 BASIC9.82□□□□□ -0.84
Ube3bQ9ES34 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Ube3bQ9ES34 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Ube3bQ9ES34 4933406F09Rik-202ENSMUST00000180508 680 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Ube3bQ9ES34 Gm18970-201ENSMUST00000186040 938 ntBASIC9.82□□□□□ -0.84
Ube3bQ9ES34 Gm37950-201ENSMUST00000191616 364 ntTSL 3 BASIC9.82□□□□□ -0.84
Ube3bQ9ES34 Ighv6-2-201ENSMUST00000192430 295 ntBASIC9.82□□□□□ -0.84
Ube3bQ9ES34 Gm37679-201ENSMUST00000192868 1192 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Ube3bQ9ES34 Gm37901-201ENSMUST00000195107 514 ntBASIC9.82□□□□□ -0.84
Ube3bQ9ES34 Gm35667-201ENSMUST00000199122 711 ntTSL 5 BASIC9.82□□□□□ -0.84
Ube3bQ9ES34 Mcee-204ENSMUST00000206882 391 ntTSL 2 BASIC9.82□□□□□ -0.84
Ube3bQ9ES34 Gm46103-201ENSMUST00000217614 341 ntBASIC9.82□□□□□ -0.84
Ube3bQ9ES34 Gm21321-201ENSMUST00000220179 446 ntBASIC9.82□□□□□ -0.84
Ube3bQ9ES34 AC123534.1-201ENSMUST00000224060 656 ntBASIC9.82□□□□□ -0.84
Ube3bQ9ES34 AC110380.1-201ENSMUST00000226987 389 ntBASIC9.82□□□□□ -0.84
Ube3bQ9ES34 Olfr734-201ENSMUST00000050928 1033 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Ube3bQ9ES34 Olfr1502-201ENSMUST00000074221 951 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Ube3bQ9ES34 Olfr818-201ENSMUST00000074308 957 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Ube3bQ9ES34 Gm8882-201ENSMUST00000080849 1240 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ube3bQ9ES34 Gimap4-201ENSMUST00000067506 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ube3bQ9ES34 Stat1-206ENSMUST00000186857 4241 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ube3bQ9ES34 AC122878.1-201ENSMUST00000227716 1460 ntBASIC9.82□□□□□ -0.84
Ube3bQ9ES34 Nasp-203ENSMUST00000081182 1461 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Ube3bQ9ES34 Gm3675-201ENSMUST00000175904 1653 ntBASIC9.82□□□□□ -0.84
Ube3bQ9ES34 Flna-203ENSMUST00000114299 8456 ntAPPRIS P2 TSL 5 BASIC9.82□□□□□ -0.84
Ube3bQ9ES34 Gm16316-201ENSMUST00000154065 3393 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Ube3bQ9ES34 Fam168a-202ENSMUST00000107042 6388 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Ube3bQ9ES34 Tdrd1-204ENSMUST00000121249 5047 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ube3bQ9ES34 Ica1l-206ENSMUST00000191251 3415 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ube3bQ9ES34 Rbmx-201ENSMUST00000098470 3107 ntTSL 5 BASIC9.82□□□□□ -0.84
Ube3bQ9ES34 Olfr975-202ENSMUST00000216647 2848 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Ube3bQ9ES34 A530064D06Rik-202ENSMUST00000053612 1900 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ube3bQ9ES34 1700093K21Rik-204ENSMUST00000169264 1320 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Ube3bQ9ES34 Napg-201ENSMUST00000025474 3562 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ube3bQ9ES34 Rnf6-208ENSMUST00000169407 3276 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
Ube3bQ9ES34 Synj2-209ENSMUST00000115790 4808 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Ube3bQ9ES34 Clasp2-202ENSMUST00000163895 4112 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Ube3bQ9ES34 Gm45237-202ENSMUST00000211157 2452 ntTSL 5 BASIC9.81□□□□□ -0.84
Ube3bQ9ES34 Gm20045-201ENSMUST00000192658 5577 ntBASIC9.81□□□□□ -0.84
Ube3bQ9ES34 Baz2a-202ENSMUST00000170054 8372 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Ube3bQ9ES34 Baz2a-201ENSMUST00000045621 8369 ntAPPRIS P2 TSL 5 BASIC9.81□□□□□ -0.84
Ube3bQ9ES34 Srbd1-201ENSMUST00000095187 3530 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Ube3bQ9ES34 Glmn-203ENSMUST00000100949 1759 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Ube3bQ9ES34 Gm38014-201ENSMUST00000193349 2612 ntBASIC9.81□□□□□ -0.84
Ube3bQ9ES34 Olfr545-202ENSMUST00000216116 3496 ntAPPRIS P1 TSL 3 BASIC9.81□□□□□ -0.84
Ube3bQ9ES34 Trim12a-202ENSMUST00000106837 1389 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Ube3bQ9ES34 Wac-202ENSMUST00000092112 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ube3bQ9ES34 D5Ertd615e-202ENSMUST00000197016 3911 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Ube3bQ9ES34 Gngt2-202ENSMUST00000100532 573 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ube3bQ9ES34 Snord70-201ENSMUST00000104157 87 ntBASIC9.81□□□□□ -0.84
Ube3bQ9ES34 Gm24257-201ENSMUST00000104472 131 ntBASIC9.81□□□□□ -0.84
Ube3bQ9ES34 Gm14932-201ENSMUST00000117112 453 ntBASIC9.81□□□□□ -0.84
Ube3bQ9ES34 Gm13423-201ENSMUST00000117205 888 ntBASIC9.81□□□□□ -0.84
Ube3bQ9ES34 Gm13454-201ENSMUST00000118166 483 ntBASIC9.81□□□□□ -0.84
Ube3bQ9ES34 Gm12987-201ENSMUST00000118562 489 ntBASIC9.81□□□□□ -0.84
Ube3bQ9ES34 Gm10639-202ENSMUST00000121273 873 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ube3bQ9ES34 Gm5270-201ENSMUST00000121506 1002 ntBASIC9.81□□□□□ -0.84
Ube3bQ9ES34 Gm25721-201ENSMUST00000157496 171 ntBASIC9.81□□□□□ -0.84
Ube3bQ9ES34 Gm24899-201ENSMUST00000158892 73 ntBASIC9.81□□□□□ -0.84
Ube3bQ9ES34 Snrpe-201ENSMUST00000164096 669 ntTSL 2 BASIC9.81□□□□□ -0.84
Ube3bQ9ES34 Gm6904-201ENSMUST00000168702 898 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Ube3bQ9ES34 Gm17235-201ENSMUST00000169128 964 ntBASIC9.81□□□□□ -0.84
Ube3bQ9ES34 Gm21886-201ENSMUST00000178391 645 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Ube3bQ9ES34 Gm20896-202ENSMUST00000188585 921 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ube3bQ9ES34 Gm17970-201ENSMUST00000192199 685 ntBASIC9.81□□□□□ -0.84
Ube3bQ9ES34 Gm6525-201ENSMUST00000193882 1029 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Ube3bQ9ES34 Gm42745-201ENSMUST00000200904 193 ntTSL 3 BASIC9.81□□□□□ -0.84
Ube3bQ9ES34 Gm43578-201ENSMUST00000201250 459 ntBASIC9.81□□□□□ -0.84
Ube3bQ9ES34 Gm43004-201ENSMUST00000201872 703 ntBASIC9.81□□□□□ -0.84
Ube3bQ9ES34 Gm18060-201ENSMUST00000207407 564 ntBASIC9.81□□□□□ -0.84
Ube3bQ9ES34 Gm36485-201ENSMUST00000214286 464 ntTSL 3 BASIC9.81□□□□□ -0.84
Ube3bQ9ES34 AC134439.2-201ENSMUST00000221950 467 ntBASIC9.81□□□□□ -0.84
Ube3bQ9ES34 Gm2721-202ENSMUST00000222652 459 ntTSL 5 BASIC9.81□□□□□ -0.84
Ube3bQ9ES34 Gm29687-201ENSMUST00000223022 879 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Ube3bQ9ES34 Tmem216-201ENSMUST00000025569 1101 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Ube3bQ9ES34 1700001C02Rik-201ENSMUST00000031078 731 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ube3bQ9ES34 Tln2-201ENSMUST00000039662 8052 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ube3bQ9ES34 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ube3bQ9ES34 Olfr1461-201ENSMUST00000053772 939 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Ube3bQ9ES34 Olfr344-201ENSMUST00000075474 930 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Ube3bQ9ES34 Olfr1510-202ENSMUST00000215928 1934 ntAPPRIS P1 TSL 3 BASIC9.81□□□□□ -0.84
Ube3bQ9ES34 Flnb-201ENSMUST00000052678 9100 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Ube3bQ9ES34 Onecut2-201ENSMUST00000115145 13389 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ube3bQ9ES34 Onecut2-202ENSMUST00000175965 13391 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ube3bQ9ES34 Rhpn2-202ENSMUST00000085556 3046 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ube3bQ9ES34 AC160562.1-201ENSMUST00000216170 3468 ntTSL 5 BASIC9.81□□□□□ -0.84
Ube3bQ9ES34 Brip1os-201ENSMUST00000128960 4423 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Ube3bQ9ES34 Wdr76-202ENSMUST00000099473 2315 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms