Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Dennd1b-201ENSMUST00000094505 8073 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Cstf3Q99LI7 Fktn-203ENSMUST00000128667 6080 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Cstf3Q99LI7 Psg26-201ENSMUST00000094798 2086 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Cstf3Q99LI7 Celf2-202ENSMUST00000100429 7491 ntAPPRIS P3 TSL 5 BASIC7.32□□□□□ -1.24
Cstf3Q99LI7 Gm6502-201ENSMUST00000086050 1533 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Cstf3Q99LI7 Skiv2l2-201ENSMUST00000022281 3689 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Cstf3Q99LI7 Pfkfb1-202ENSMUST00000112713 1872 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Cstf3Q99LI7 Zc3h11a-201ENSMUST00000027736 4395 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Cstf3Q99LI7 Epc1-203ENSMUST00000115870 3817 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Cstf3Q99LI7 AC124414.1-201ENSMUST00000218033 2946 ntBASIC7.32□□□□□ -1.24
Cstf3Q99LI7 Pcdh15-215ENSMUST00000131321 6926 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Cstf3Q99LI7 Ank3-239ENSMUST00000183148 7404 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
Cstf3Q99LI7 5031434C07Rik-202ENSMUST00000188014 3244 ntBASIC7.32□□□□□ -1.24
Cstf3Q99LI7 Ktn1-210ENSMUST00000187839 7945 ntAPPRIS P3 TSL 5 BASIC7.32□□□□□ -1.24
Cstf3Q99LI7 Olfr656-202ENSMUST00000215575 4091 ntAPPRIS ALT2 TSL 3 BASIC7.32□□□□□ -1.24
Cstf3Q99LI7 Olfr1393-202ENSMUST00000213323 3010 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Cstf3Q99LI7 Ankrd49-206ENSMUST00000216372 2679 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Cstf3Q99LI7 Slc22a19-201ENSMUST00000025666 1998 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Cstf3Q99LI7 Selenof-202ENSMUST00000106211 1178 ntTSL 3 BASIC7.32□□□□□ -1.24
Cstf3Q99LI7 Armt1-202ENSMUST00000117489 680 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Cstf3Q99LI7 Gm12445-201ENSMUST00000117947 885 ntBASIC7.32□□□□□ -1.24
Cstf3Q99LI7 Gm13325-201ENSMUST00000118746 806 ntBASIC7.32□□□□□ -1.24
Cstf3Q99LI7 Pbdc1-202ENSMUST00000119477 1239 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Cstf3Q99LI7 Gm6292-201ENSMUST00000120712 1095 ntBASIC7.32□□□□□ -1.24
Cstf3Q99LI7 Snrp1c-ps2-201ENSMUST00000120976 365 ntBASIC7.32□□□□□ -1.24
Cstf3Q99LI7 Gm12634-201ENSMUST00000122157 992 ntBASIC7.32□□□□□ -1.24
Cstf3Q99LI7 Gm15736-201ENSMUST00000141710 420 ntTSL 3 BASIC7.32□□□□□ -1.24
Cstf3Q99LI7 Gm14339-201ENSMUST00000146224 423 ntTSL 2 BASIC7.32□□□□□ -1.24
Cstf3Q99LI7 C330019F10Rik-201ENSMUST00000149428 459 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Cstf3Q99LI7 Mir1968-201ENSMUST00000157429 68 ntBASIC7.32□□□□□ -1.24
Cstf3Q99LI7 Gm25721-201ENSMUST00000157496 171 ntBASIC7.32□□□□□ -1.24
Cstf3Q99LI7 Commd3-212ENSMUST00000171845 938 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Cstf3Q99LI7 Gm4252-201ENSMUST00000174823 313 ntBASIC7.32□□□□□ -1.24
Cstf3Q99LI7 Gm20617-201ENSMUST00000177082 717 ntTSL 3 BASIC7.32□□□□□ -1.24
Cstf3Q99LI7 Magea2-203ENSMUST00000178950 1299 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Cstf3Q99LI7 Gm9423-201ENSMUST00000183173 997 ntBASIC7.32□□□□□ -1.24
Cstf3Q99LI7 4930535O05Rik-201ENSMUST00000184406 419 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Cstf3Q99LI7 Gm29126-201ENSMUST00000188686 151 ntBASIC7.32□□□□□ -1.24
Cstf3Q99LI7 Gm29273-201ENSMUST00000188880 262 ntBASIC7.32□□□□□ -1.24
Cstf3Q99LI7 Gm5541-201ENSMUST00000193248 1113 ntBASIC7.32□□□□□ -1.24
Cstf3Q99LI7 Gm44996-201ENSMUST00000208787 2980 ntBASIC7.32□□□□□ -1.24
Cstf3Q99LI7 Gm5535-206ENSMUST00000210067 679 ntTSL 5 BASIC7.32□□□□□ -1.24
Cstf3Q99LI7 Cutal-202ENSMUST00000047447 1054 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Cstf3Q99LI7 4930563M21Rik-201ENSMUST00000060468 792 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Cstf3Q99LI7 Chn1-201ENSMUST00000070579 1023 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Cstf3Q99LI7 Gm8882-201ENSMUST00000080849 1240 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Cstf3Q99LI7 Gm24143-201ENSMUST00000082633 145 ntBASIC7.32□□□□□ -1.24
Cstf3Q99LI7 Klk1b3-201ENSMUST00000085450 889 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Cstf3Q99LI7 Dmrtc1c2-202ENSMUST00000087899 717 ntAPPRIS P3 TSL 5 BASIC7.32□□□□□ -1.24
Cstf3Q99LI7 Cep112it-201ENSMUST00000143781 4813 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Cstf3Q99LI7 Armc8-203ENSMUST00000186049 2761 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Cstf3Q99LI7 Gm3139-201ENSMUST00000178330 1446 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Cstf3Q99LI7 Gm3183-201ENSMUST00000180076 1446 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
Cstf3Q99LI7 Cdh9-201ENSMUST00000026432 2892 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Cstf3Q99LI7 Cntn4-204ENSMUST00000113260 2531 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Cstf3Q99LI7 Msn-201ENSMUST00000117399 3842 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Cstf3Q99LI7 Gm44553-201ENSMUST00000206316 2037 ntBASIC7.32□□□□□ -1.24
Cstf3Q99LI7 Gm4863-201ENSMUST00000196907 1381 ntBASIC7.32□□□□□ -1.24
Cstf3Q99LI7 Gm7647-201ENSMUST00000200996 1389 ntBASIC7.32□□□□□ -1.24
Cstf3Q99LI7 N4bp2-204ENSMUST00000201489 9055 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Cstf3Q99LI7 Aldh18a1-207ENSMUST00000176939 3427 ntAPPRIS ALT1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Cstf3Q99LI7 Nr1h5-203ENSMUST00000196983 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
Cstf3Q99LI7 6720489N17Rik-203ENSMUST00000223338 1457 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
Cstf3Q99LI7 Vmn1r37-205ENSMUST00000227923 1773 ntAPPRIS P2 BASIC7.31□□□□□ -1.24
Cstf3Q99LI7 Olfr666-202ENSMUST00000214757 1949 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Cstf3Q99LI7 Nasp-201ENSMUST00000030456 2520 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Cstf3Q99LI7 Gm38070-201ENSMUST00000191850 6480 ntBASIC7.31□□□□□ -1.24
Cstf3Q99LI7 5330416C01Rik-203ENSMUST00000144993 3287 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Cstf3Q99LI7 Mpzl3-203ENSMUST00000114664 3424 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Cstf3Q99LI7 Dclk1-208ENSMUST00000198437 4315 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Cstf3Q99LI7 Cisd3-202ENSMUST00000107584 546 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
Cstf3Q99LI7 Smco3-202ENSMUST00000111894 1069 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Cstf3Q99LI7 Parp11-203ENSMUST00000112193 1725 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Cstf3Q99LI7 Gm26469-201ENSMUST00000116765 121 ntBASIC7.31□□□□□ -1.24
Cstf3Q99LI7 Gm24195-201ENSMUST00000116804 137 ntBASIC7.31□□□□□ -1.24
Cstf3Q99LI7 Gm7785-201ENSMUST00000117121 892 ntBASIC7.31□□□□□ -1.24
Cstf3Q99LI7 Gm13229-201ENSMUST00000118238 340 ntBASIC7.31□□□□□ -1.24
Cstf3Q99LI7 Ptprg-202ENSMUST00000119888 2787 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Cstf3Q99LI7 Defa-ps16-201ENSMUST00000121939 171 ntBASIC7.31□□□□□ -1.24
Cstf3Q99LI7 Afap1l2-203ENSMUST00000122359 3667 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
Cstf3Q99LI7 Gimap6-203ENSMUST00000126422 425 ntTSL 3 BASIC7.31□□□□□ -1.24
Cstf3Q99LI7 Gm28053-201ENSMUST00000127537 350 ntAPPRIS P1 TSL 3 BASIC7.31□□□□□ -1.24
Cstf3Q99LI7 Pard3bos1-202ENSMUST00000138535 1878 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Cstf3Q99LI7 Mgst1-207ENSMUST00000140932 742 ntTSL 3 BASIC7.31□□□□□ -1.24
Cstf3Q99LI7 Mir1983-201ENSMUST00000157523 132 ntBASIC7.31□□□□□ -1.24
Cstf3Q99LI7 Gm17122-201ENSMUST00000166047 372 ntTSL 5 BASIC7.31□□□□□ -1.24
Cstf3Q99LI7 Gm9286-201ENSMUST00000173586 508 ntBASIC7.31□□□□□ -1.24
Cstf3Q99LI7 Scgb2b20-201ENSMUST00000179248 523 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Cstf3Q99LI7 D330041H03Rik-203ENSMUST00000180579 605 ntTSL 5 BASIC7.31□□□□□ -1.24
Cstf3Q99LI7 4930448K20Rik-202ENSMUST00000182072 1433 ntBASIC7.31□□□□□ -1.24
Cstf3Q99LI7 Mir6930-201ENSMUST00000183859 68 ntBASIC7.31□□□□□ -1.24
Cstf3Q99LI7 Gm28126-201ENSMUST00000185286 356 ntTSL 5 BASIC7.31□□□□□ -1.24
Cstf3Q99LI7 Scgb2b18-201ENSMUST00000186529 523 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Cstf3Q99LI7 Gm28212-201ENSMUST00000187114 356 ntTSL 5 BASIC7.31□□□□□ -1.24
Cstf3Q99LI7 Gm29568-201ENSMUST00000187884 356 ntTSL 5 BASIC7.31□□□□□ -1.24
Cstf3Q99LI7 Scgb2b11-201ENSMUST00000188293 523 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Cstf3Q99LI7 Gm29080-201ENSMUST00000188565 356 ntTSL 5 BASIC7.31□□□□□ -1.24
Cstf3Q99LI7 Gm28944-201ENSMUST00000188946 356 ntTSL 5 BASIC7.31□□□□□ -1.24
Cstf3Q99LI7 Gm28908-201ENSMUST00000189002 356 ntTSL 5 BASIC7.31□□□□□ -1.24
Cstf3Q99LI7 Gm29562-201ENSMUST00000190113 904 ntBASIC7.31□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms