Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Ccl20-201ENSMUST00000027351 1417 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Clrn1Q8K445 Pogz-203ENSMUST00000107266 4100 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
Clrn1Q8K445 Igkv8-27-201ENSMUST00000103381 300 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Clrn1Q8K445 Gm14444-202ENSMUST00000109070 1281 ntAPPRIS P1 TSL 3 BASIC7.3□□□□□ -1.24
Clrn1Q8K445 Smim23-202ENSMUST00000109365 331 ntTSL 5 BASIC7.3□□□□□ -1.24
Clrn1Q8K445 Klra7-204ENSMUST00000112013 1104 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
Clrn1Q8K445 Gm15018-201ENSMUST00000117090 633 ntBASIC7.3□□□□□ -1.24
Clrn1Q8K445 Armt1-202ENSMUST00000117489 680 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Clrn1Q8K445 Gm12959-201ENSMUST00000119396 403 ntBASIC7.3□□□□□ -1.24
Clrn1Q8K445 Gm13680-201ENSMUST00000119790 793 ntBASIC7.3□□□□□ -1.24
Clrn1Q8K445 Gm15836-201ENSMUST00000119952 793 ntBASIC7.3□□□□□ -1.24
Clrn1Q8K445 Pogk-201ENSMUST00000127596 769 ntTSL 3 BASIC7.3□□□□□ -1.24
Clrn1Q8K445 Gm15507-203ENSMUST00000140958 658 ntTSL 3 BASIC7.3□□□□□ -1.24
Clrn1Q8K445 Fbxl12-210ENSMUST00000155301 476 ntTSL 3 BASIC7.3□□□□□ -1.24
Clrn1Q8K445 Gm26408-201ENSMUST00000157672 127 ntBASIC7.3□□□□□ -1.24
Clrn1Q8K445 Gm22847-201ENSMUST00000157707 105 ntBASIC7.3□□□□□ -1.24
Clrn1Q8K445 Gm6921-201ENSMUST00000161478 435 ntBASIC7.3□□□□□ -1.24
Clrn1Q8K445 Vmn2r-ps64-201ENSMUST00000173690 523 ntBASIC7.3□□□□□ -1.24
Clrn1Q8K445 Gm8974-201ENSMUST00000175770 479 ntBASIC7.3□□□□□ -1.24
Clrn1Q8K445 Gm25082-201ENSMUST00000177296 255 ntBASIC7.3□□□□□ -1.24
Clrn1Q8K445 Gm20587-201ENSMUST00000186367 1186 ntBASIC7.3□□□□□ -1.24
Clrn1Q8K445 Gm5251-201ENSMUST00000188959 472 ntBASIC7.3□□□□□ -1.24
Clrn1Q8K445 C430002N11Rik-204ENSMUST00000190054 443 ntTSL 3 BASIC7.3□□□□□ -1.24
Clrn1Q8K445 Gm18797-201ENSMUST00000190809 1174 ntBASIC7.3□□□□□ -1.24
Clrn1Q8K445 Gm38047-201ENSMUST00000193690 1133 ntBASIC7.3□□□□□ -1.24
Clrn1Q8K445 Gm7478-201ENSMUST00000201054 581 ntBASIC7.3□□□□□ -1.24
Clrn1Q8K445 Gm44691-201ENSMUST00000207562 324 ntTSL 5 BASIC7.3□□□□□ -1.24
Clrn1Q8K445 Gm30692-201ENSMUST00000208709 801 ntTSL 5 BASIC7.3□□□□□ -1.24
Clrn1Q8K445 Gm9354-201ENSMUST00000209075 468 ntBASIC7.3□□□□□ -1.24
Clrn1Q8K445 Gm6909-201ENSMUST00000209825 989 ntBASIC7.3□□□□□ -1.24
Clrn1Q8K445 Gm33096-201ENSMUST00000210189 493 ntBASIC7.3□□□□□ -1.24
Clrn1Q8K445 Gm45388-202ENSMUST00000211101 815 ntTSL 5 BASIC7.3□□□□□ -1.24
Clrn1Q8K445 Rpl32l-201ENSMUST00000216127 399 ntBASIC7.3□□□□□ -1.24
Clrn1Q8K445 Gm18292-201ENSMUST00000216673 919 ntBASIC7.3□□□□□ -1.24
Clrn1Q8K445 Gm35326-201ENSMUST00000218234 1041 ntTSL 5 BASIC7.3□□□□□ -1.24
Clrn1Q8K445 Gm33684-201ENSMUST00000221119 263 ntTSL 3 BASIC7.3□□□□□ -1.24
Clrn1Q8K445 AC123920.1-201ENSMUST00000221449 384 ntBASIC7.3□□□□□ -1.24
Clrn1Q8K445 Gm18629-201ENSMUST00000222496 884 ntBASIC7.3□□□□□ -1.24
Clrn1Q8K445 CT009713.5-201ENSMUST00000224508 909 ntBASIC7.3□□□□□ -1.24
Clrn1Q8K445 Dmrtc1c2-202ENSMUST00000087899 717 ntAPPRIS P3 TSL 5 BASIC7.3□□□□□ -1.24
Clrn1Q8K445 Klra7-203ENSMUST00000088011 921 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
Clrn1Q8K445 Spink11-201ENSMUST00000097587 746 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Clrn1Q8K445 Sox6-212ENSMUST00000206369 2863 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
Clrn1Q8K445 1700029M20Rik-203ENSMUST00000153347 2963 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Clrn1Q8K445 Gm17167-201ENSMUST00000169242 5054 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Clrn1Q8K445 Dalir-201ENSMUST00000188773 2170 ntBASIC7.3□□□□□ -1.24
Clrn1Q8K445 Zfp52-201ENSMUST00000079242 2175 ntAPPRIS P1 TSL 3 BASIC7.3□□□□□ -1.24
Clrn1Q8K445 Senp6-203ENSMUST00000165607 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
Clrn1Q8K445 CT571245.1-201ENSMUST00000218642 3465 ntBASIC7.3□□□□□ -1.24
Clrn1Q8K445 Gm17083-201ENSMUST00000165849 1366 ntBASIC7.3□□□□□ -1.24
Clrn1Q8K445 Gm19031-201ENSMUST00000176280 1365 ntBASIC7.3□□□□□ -1.24
Clrn1Q8K445 Gm14085-201ENSMUST00000110521 3740 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
Clrn1Q8K445 4831440D22Rik-201ENSMUST00000211287 2929 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Clrn1Q8K445 Ugt2a3-201ENSMUST00000031195 2117 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Clrn1Q8K445 Gm44165-201ENSMUST00000203093 1469 ntBASIC7.3□□□□□ -1.24
Clrn1Q8K445 AC131068.3-201ENSMUST00000228438 1456 ntBASIC7.3□□□□□ -1.24
Clrn1Q8K445 Gm46339-201ENSMUST00000222720 3539 ntBASIC7.3□□□□□ -1.24
Clrn1Q8K445 Fryl-202ENSMUST00000101127 11340 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
Clrn1Q8K445 Cd300lb-201ENSMUST00000106581 2880 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Clrn1Q8K445 Cfap161-202ENSMUST00000119134 2868 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
Clrn1Q8K445 Slc8a1-202ENSMUST00000163123 2877 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Clrn1Q8K445 Olfr1347-202ENSMUST00000207339 1737 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.24
Clrn1Q8K445 Dsc3-203ENSMUST00000225110 3123 ntAPPRIS P2 BASIC7.3□□□□□ -1.24
Clrn1Q8K445 Birc2-202ENSMUST00000074246 3130 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Clrn1Q8K445 Gbp7-202ENSMUST00000171263 2497 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Clrn1Q8K445 Tars2-203ENSMUST00000098857 3228 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Clrn1Q8K445 Gm6117-201ENSMUST00000150540 1333 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Clrn1Q8K445 Rgr-201ENSMUST00000022338 4240 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Clrn1Q8K445 Olfr775-202ENSMUST00000214109 3598 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
Clrn1Q8K445 Mpzl3-203ENSMUST00000114664 3424 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Clrn1Q8K445 Olfr1254-202ENSMUST00000111523 2650 ntAPPRIS P1 TSL 3 BASIC7.29□□□□□ -1.24
Clrn1Q8K445 Ms4a6b-205ENSMUST00000163078 2680 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
Clrn1Q8K445 Pfkfb3-214ENSMUST00000179584 4756 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Clrn1Q8K445 Zfp473-207ENSMUST00000149011 9230 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Clrn1Q8K445 Adgrf1-201ENSMUST00000047399 3853 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Clrn1Q8K445 Tmem52b-201ENSMUST00000032263 2877 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Clrn1Q8K445 Cpvl-203ENSMUST00000204674 1511 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Clrn1Q8K445 Nr3c1-202ENSMUST00000097592 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
Clrn1Q8K445 1700029I15Rik-202ENSMUST00000111280 416 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Clrn1Q8K445 Gm13929-201ENSMUST00000117553 1125 ntBASIC7.29□□□□□ -1.24
Clrn1Q8K445 Gm13526-201ENSMUST00000117970 189 ntBASIC7.29□□□□□ -1.24
Clrn1Q8K445 Gm11320-201ENSMUST00000119434 463 ntBASIC7.29□□□□□ -1.24
Clrn1Q8K445 Gm15081-201ENSMUST00000119794 844 ntBASIC7.29□□□□□ -1.24
Clrn1Q8K445 Gm6292-201ENSMUST00000120712 1095 ntBASIC7.29□□□□□ -1.24
Clrn1Q8K445 Gm25047-201ENSMUST00000122667 104 ntBASIC7.29□□□□□ -1.24
Clrn1Q8K445 4930555O08Rik-201ENSMUST00000122821 668 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Clrn1Q8K445 Zfp113-202ENSMUST00000132318 488 ntTSL 3 BASIC7.29□□□□□ -1.24
Clrn1Q8K445 Rps12-ps9-201ENSMUST00000139165 399 ntBASIC7.29□□□□□ -1.24
Clrn1Q8K445 Platr14-205ENSMUST00000146553 770 ntTSL 2 BASIC7.29□□□□□ -1.24
Clrn1Q8K445 Gm11482-201ENSMUST00000147067 719 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Clrn1Q8K445 2610001J05Rik-202ENSMUST00000155856 1077 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Clrn1Q8K445 Mir1968-201ENSMUST00000157429 68 ntBASIC7.29□□□□□ -1.24
Clrn1Q8K445 Gm23822-201ENSMUST00000158739 128 ntBASIC7.29□□□□□ -1.24
Clrn1Q8K445 Gm3486-201ENSMUST00000169361 883 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Clrn1Q8K445 Rpain-211ENSMUST00000169965 343 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Clrn1Q8K445 Gm4181-201ENSMUST00000170249 898 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Clrn1Q8K445 Apol11a-201ENSMUST00000172191 1132 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
Clrn1Q8K445 Gm3269-202ENSMUST00000178137 618 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
Clrn1Q8K445 Gm3594-203ENSMUST00000179747 618 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
Clrn1Q8K445 6530411M01Rik-201ENSMUST00000181618 1033 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms