Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 AC133948.1-201ENSMUST00000214867 599 ntTSL 3 BASIC8.47□□□□□ -1.05
Ccdc38Q8CDN8 Olfr1445-201ENSMUST00000049624 1001 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
Ccdc38Q8CDN8 Olfr1377-201ENSMUST00000075177 1063 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
Ccdc38Q8CDN8 Gm8882-201ENSMUST00000080849 1240 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Ccdc38Q8CDN8 Dock8-201ENSMUST00000025831 7810 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Ccdc38Q8CDN8 Nt5c1b-220ENSMUST00000223534 1798 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
Ccdc38Q8CDN8 Olfr566-203ENSMUST00000213481 2040 ntAPPRIS ALT1 TSL 3 BASIC8.47□□□□□ -1.05
Ccdc38Q8CDN8 Zbed4-ps3-201ENSMUST00000187149 3244 ntBASIC8.47□□□□□ -1.05
Ccdc38Q8CDN8 Kank4os-201ENSMUST00000133455 2251 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Ccdc38Q8CDN8 St7-203ENSMUST00000053148 2288 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Ccdc38Q8CDN8 Atp6v0d2-201ENSMUST00000029900 2539 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Ccdc38Q8CDN8 Zfp661-201ENSMUST00000077422 2765 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Ccdc38Q8CDN8 Vmn1r17-203ENSMUST00000228156 2090 ntAPPRIS ALT2 BASIC8.47□□□□□ -1.05
Ccdc38Q8CDN8 Gm35722-201ENSMUST00000218270 1625 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Ccdc38Q8CDN8 Acod1-201ENSMUST00000022722 2623 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Ccdc38Q8CDN8 Zc3h11a-201ENSMUST00000027736 4395 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Ccdc38Q8CDN8 Slc4a10-202ENSMUST00000102735 5482 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
Ccdc38Q8CDN8 Usp40-201ENSMUST00000040783 5049 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.05
Ccdc38Q8CDN8 4930448K20Rik-202ENSMUST00000182072 1433 ntBASIC8.46□□□□□ -1.05
Ccdc38Q8CDN8 Arid5b-203ENSMUST00000218532 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.05
Ccdc38Q8CDN8 AC135083.2-201ENSMUST00000228599 1456 ntBASIC8.46□□□□□ -1.05
Ccdc38Q8CDN8 Gm26569-201ENSMUST00000181968 1789 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
Ccdc38Q8CDN8 Aldh18a1-207ENSMUST00000176939 3427 ntAPPRIS ALT1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Ccdc38Q8CDN8 Mir704-201ENSMUST00000102106 77 ntBASIC8.46□□□□□ -1.06
Ccdc38Q8CDN8 Smim23-202ENSMUST00000109365 331 ntTSL 5 BASIC8.46□□□□□ -1.06
Ccdc38Q8CDN8 Rgs8-204ENSMUST00000111814 678 ntTSL 3 BASIC8.46□□□□□ -1.06
Ccdc38Q8CDN8 Ndufb5-203ENSMUST00000122290 625 ntTSL 2 BASIC8.46□□□□□ -1.06
Ccdc38Q8CDN8 Gimap6-203ENSMUST00000126422 425 ntTSL 3 BASIC8.46□□□□□ -1.06
Ccdc38Q8CDN8 Pabpn1-203ENSMUST00000139985 903 ntAPPRIS ALT2 TSL 2 BASIC8.46□□□□□ -1.06
Ccdc38Q8CDN8 Gm11588-201ENSMUST00000141758 658 ntTSL 5 BASIC8.46□□□□□ -1.06
Ccdc38Q8CDN8 Gm25721-201ENSMUST00000157496 171 ntBASIC8.46□□□□□ -1.06
Ccdc38Q8CDN8 Gm16573-203ENSMUST00000162231 807 ntTSL 2 BASIC8.46□□□□□ -1.06
Ccdc38Q8CDN8 Gm29273-201ENSMUST00000188880 262 ntBASIC8.46□□□□□ -1.06
Ccdc38Q8CDN8 Gm28264-201ENSMUST00000190657 398 ntTSL 5 BASIC8.46□□□□□ -1.06
Ccdc38Q8CDN8 Gm29250-201ENSMUST00000191372 368 ntTSL 5 BASIC8.46□□□□□ -1.06
Ccdc38Q8CDN8 Gm43809-201ENSMUST00000200694 338 ntTSL 3 BASIC8.46□□□□□ -1.06
Ccdc38Q8CDN8 Gm33926-201ENSMUST00000208755 357 ntTSL 2 BASIC8.46□□□□□ -1.06
Ccdc38Q8CDN8 9530078K11Rik-201ENSMUST00000208883 694 ntBASIC8.46□□□□□ -1.06
Ccdc38Q8CDN8 Spaca7-203ENSMUST00000210276 715 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.06
Ccdc38Q8CDN8 Gm34597-201ENSMUST00000211189 633 ntTSL 5 BASIC8.46□□□□□ -1.06
Ccdc38Q8CDN8 Cenpn-205ENSMUST00000212775 837 ntTSL 3 BASIC8.46□□□□□ -1.06
Ccdc38Q8CDN8 CT010480.3-201ENSMUST00000224712 259 ntBASIC8.46□□□□□ -1.06
Ccdc38Q8CDN8 Slurp1-201ENSMUST00000023261 567 ntTSL 5 BASIC8.46□□□□□ -1.06
Ccdc38Q8CDN8 Mdc1-201ENSMUST00000082337 7335 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
Ccdc38Q8CDN8 Gm29379-201ENSMUST00000186305 2166 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Ccdc38Q8CDN8 Gm28276-201ENSMUST00000188508 2166 ntTSL 5 BASIC8.46□□□□□ -1.06
Ccdc38Q8CDN8 Gm28201-201ENSMUST00000189989 2166 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Ccdc38Q8CDN8 Gm28867-201ENSMUST00000190194 2166 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Ccdc38Q8CDN8 Trrap-215ENSMUST00000213013 12398 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.06
Ccdc38Q8CDN8 Apbb1ip-201ENSMUST00000014290 2773 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Ccdc38Q8CDN8 Cpeb4-202ENSMUST00000109412 6303 ntAPPRIS ALT1 TSL 5 BASIC8.46□□□□□ -1.06
Ccdc38Q8CDN8 Pcyt1b-201ENSMUST00000045898 4888 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Ccdc38Q8CDN8 Agtpbp1-201ENSMUST00000022040 8174 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.06
Ccdc38Q8CDN8 Slitrk4-201ENSMUST00000069926 8494 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Ccdc38Q8CDN8 Mpzl3-203ENSMUST00000114664 3424 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Ccdc38Q8CDN8 Olfr845-203ENSMUST00000215572 3446 ntAPPRIS P1 TSL 3 BASIC8.46□□□□□ -1.06
Ccdc38Q8CDN8 Zbtb18-206ENSMUST00000193480 3734 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Ccdc38Q8CDN8 Mme-201ENSMUST00000029400 3782 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Ccdc38Q8CDN8 Gm45807-201ENSMUST00000209142 2874 ntBASIC8.46□□□□□ -1.06
Ccdc38Q8CDN8 Tmem27-202ENSMUST00000112280 1389 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
Ccdc38Q8CDN8 Gm7647-201ENSMUST00000200996 1389 ntBASIC8.46□□□□□ -1.06
Ccdc38Q8CDN8 Plb1-205ENSMUST00000202201 3539 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Ccdc38Q8CDN8 Hdac9-204ENSMUST00000209750 3204 ntAPPRIS P5 TSL 5 BASIC8.46□□□□□ -1.06
Ccdc38Q8CDN8 AC159193.3-201ENSMUST00000221902 2622 ntBASIC8.46□□□□□ -1.06
Ccdc38Q8CDN8 Parp11-203ENSMUST00000112193 1725 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Ccdc38Q8CDN8 Gm33035-201ENSMUST00000219854 1718 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Ccdc38Q8CDN8 4930443O20Rik-201ENSMUST00000135659 1443 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Ccdc38Q8CDN8 Gm3139-201ENSMUST00000178330 1446 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
Ccdc38Q8CDN8 Gm3183-201ENSMUST00000180076 1446 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.06
Ccdc38Q8CDN8 Gm35208-201ENSMUST00000221590 1411 ntTSL 5 BASIC8.46□□□□□ -1.06
Ccdc38Q8CDN8 Vmn1r57-204ENSMUST00000228062 2365 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
Ccdc38Q8CDN8 St18-201ENSMUST00000043578 5862 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Ccdc38Q8CDN8 Trim40-201ENSMUST00000087158 2117 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
Ccdc38Q8CDN8 Slfn9-201ENSMUST00000038211 5769 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Ccdc38Q8CDN8 Gm17300-201ENSMUST00000172202 1527 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Ccdc38Q8CDN8 Gm6502-201ENSMUST00000086050 1533 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Ccdc38Q8CDN8 Cxcr6-201ENSMUST00000049810 1897 ntAPPRIS P2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Ccdc38Q8CDN8 Actl11-201ENSMUST00000085073 3993 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Ccdc38Q8CDN8 AC158988.1-201ENSMUST00000226731 2624 ntBASIC8.45□□□□□ -1.06
Ccdc38Q8CDN8 Cast-207ENSMUST00000222588 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Ccdc38Q8CDN8 Ociad1-203ENSMUST00000166823 3354 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Ccdc38Q8CDN8 Pax5-201ENSMUST00000014174 8004 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Ccdc38Q8CDN8 Olfr449-202ENSMUST00000204072 1974 ntAPPRIS P1 TSL 3 BASIC8.45□□□□□ -1.06
Ccdc38Q8CDN8 Abi1-212ENSMUST00000153931 2729 ntAPPRIS ALT1 TSL 5 BASIC8.45□□□□□ -1.06
Ccdc38Q8CDN8 Gm24195-201ENSMUST00000116804 137 ntBASIC8.45□□□□□ -1.06
Ccdc38Q8CDN8 Gm13229-201ENSMUST00000118238 340 ntBASIC8.45□□□□□ -1.06
Ccdc38Q8CDN8 Gm13325-201ENSMUST00000118746 806 ntBASIC8.45□□□□□ -1.06
Ccdc38Q8CDN8 Gm6292-201ENSMUST00000120712 1095 ntBASIC8.45□□□□□ -1.06
Ccdc38Q8CDN8 Gm15501-202ENSMUST00000140687 625 ntBASIC8.45□□□□□ -1.06
Ccdc38Q8CDN8 Gm15265-202ENSMUST00000143287 814 ntTSL 3 BASIC8.45□□□□□ -1.06
Ccdc38Q8CDN8 Mllt3-208ENSMUST00000149357 794 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Ccdc38Q8CDN8 Lgals1-ps2-201ENSMUST00000170221 519 ntBASIC8.45□□□□□ -1.06
Ccdc38Q8CDN8 Gm10012-202ENSMUST00000170379 372 ntBASIC8.45□□□□□ -1.06
Ccdc38Q8CDN8 Scgb2b20-201ENSMUST00000179248 523 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Ccdc38Q8CDN8 Scgb1b25-ps-201ENSMUST00000186419 415 ntBASIC8.45□□□□□ -1.06
Ccdc38Q8CDN8 Scgb2b18-201ENSMUST00000186529 523 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Ccdc38Q8CDN8 Scgb2b11-201ENSMUST00000188293 523 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Ccdc38Q8CDN8 Tial1-214ENSMUST00000205835 562 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Ccdc38Q8CDN8 Olfr863-ps1-201ENSMUST00000213073 929 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Ccdc38Q8CDN8 AC154295.1-201ENSMUST00000217210 621 ntTSL 3 BASIC8.45□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms