Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Gm13986-202ENSMUST00000148587 3469 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Ccdc60Q8C4J0 Cyp4a30b-201ENSMUST00000119958 1527 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Ccdc60Q8C4J0 Olfr399-202ENSMUST00000215915 1796 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Ccdc60Q8C4J0 Rbms3-212ENSMUST00000174868 2164 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Ccdc60Q8C4J0 Gm12532-201ENSMUST00000148448 2684 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Ccdc60Q8C4J0 Abcb11-204ENSMUST00000180142 4963 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Ccdc60Q8C4J0 Gm16508-201ENSMUST00000197066 2742 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Ccdc60Q8C4J0 Olfr12-202ENSMUST00000213247 4158 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Ccdc60Q8C4J0 Msn-201ENSMUST00000117399 3842 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Ccdc60Q8C4J0 Olfr1124-202ENSMUST00000215909 2422 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Ccdc60Q8C4J0 Cysltr2-201ENSMUST00000044664 1760 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Ccdc60Q8C4J0 Slc17a3-202ENSMUST00000091698 1759 ntTSL 5 BASIC9.53□□□□□ -0.88
Ccdc60Q8C4J0 Gm42969-201ENSMUST00000199858 3631 ntBASIC9.53□□□□□ -0.88
Ccdc60Q8C4J0 Ephb2-202ENSMUST00000105845 10902 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Ccdc60Q8C4J0 Gm28403-201ENSMUST00000188743 2710 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Ccdc60Q8C4J0 Zfp667-201ENSMUST00000086327 3672 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Ccdc60Q8C4J0 Gm25725-201ENSMUST00000104528 130 ntBASIC9.53□□□□□ -0.88
Ccdc60Q8C4J0 Mageb8-ps-201ENSMUST00000117228 1033 ntBASIC9.53□□□□□ -0.88
Ccdc60Q8C4J0 Lrmda-206ENSMUST00000162540 742 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Ccdc60Q8C4J0 Gm17233-201ENSMUST00000168470 698 ntTSL 3 BASIC9.53□□□□□ -0.88
Ccdc60Q8C4J0 Gm20655-201ENSMUST00000176132 473 ntTSL 3 BASIC9.53□□□□□ -0.88
Ccdc60Q8C4J0 Gm20702-201ENSMUST00000176181 460 ntBASIC9.53□□□□□ -0.88
Ccdc60Q8C4J0 Mir6409-201ENSMUST00000184957 92 ntBASIC9.53□□□□□ -0.88
Ccdc60Q8C4J0 4931428L18Rik-203ENSMUST00000187659 423 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Ccdc60Q8C4J0 Gm29129-201ENSMUST00000191121 659 ntTSL 3 BASIC9.53□□□□□ -0.88
Ccdc60Q8C4J0 Gm1647-201ENSMUST00000195406 735 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Ccdc60Q8C4J0 Gm3103-201ENSMUST00000198073 752 ntBASIC9.53□□□□□ -0.88
Ccdc60Q8C4J0 Lmo3-208ENSMUST00000203435 572 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Ccdc60Q8C4J0 Mplkip-202ENSMUST00000221480 582 ntTSL 5 BASIC9.53□□□□□ -0.88
Ccdc60Q8C4J0 AC154627.1-201ENSMUST00000228799 1286 ntBASIC9.53□□□□□ -0.88
Ccdc60Q8C4J0 Rida-201ENSMUST00000022946 1004 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Ccdc60Q8C4J0 Cst11-201ENSMUST00000028934 615 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Ccdc60Q8C4J0 Gm25852-201ENSMUST00000082790 130 ntBASIC9.53□□□□□ -0.88
Ccdc60Q8C4J0 Olfr220-201ENSMUST00000085861 978 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Ccdc60Q8C4J0 Adcy10-202ENSMUST00000111439 5193 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Ccdc60Q8C4J0 Acod1-201ENSMUST00000022722 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Ccdc60Q8C4J0 Zfp655-205ENSMUST00000199322 4157 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Ccdc60Q8C4J0 Rc3h1-202ENSMUST00000161609 11006 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Ccdc60Q8C4J0 Ermard-204ENSMUST00000097395 1593 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Ccdc60Q8C4J0 Arpp21-210ENSMUST00000159451 2805 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Ccdc60Q8C4J0 4933404O12Rik-202ENSMUST00000181190 4058 ntTSL 5 BASIC9.53□□□□□ -0.88
Ccdc60Q8C4J0 6720489N17Rik-203ENSMUST00000223338 1457 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Ccdc60Q8C4J0 Nt5c1b-220ENSMUST00000223534 1798 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.88
Ccdc60Q8C4J0 Adgrl3-205ENSMUST00000117985 4974 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.88
Ccdc60Q8C4J0 Adgrl3-212ENSMUST00000120144 4999 ntTSL 5 BASIC9.52□□□□□ -0.88
Ccdc60Q8C4J0 Efl1-206ENSMUST00000207868 1537 ntTSL 3 BASIC9.52□□□□□ -0.88
Ccdc60Q8C4J0 B3gnt5-207ENSMUST00000164397 4872 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Ccdc60Q8C4J0 Ttc17-201ENSMUST00000055081 3163 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Ccdc60Q8C4J0 Slc6a18-203ENSMUST00000109680 4052 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Ccdc60Q8C4J0 Gm25276-201ENSMUST00000104300 124 ntBASIC9.52□□□□□ -0.89
Ccdc60Q8C4J0 Rpl35a-203ENSMUST00000115076 519 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.89
Ccdc60Q8C4J0 Cox7c-204ENSMUST00000132233 709 ntTSL 2 BASIC9.52□□□□□ -0.89
Ccdc60Q8C4J0 Gm13663-202ENSMUST00000145563 643 ntTSL 5 BASIC9.52□□□□□ -0.89
Ccdc60Q8C4J0 Acss2os-201ENSMUST00000148685 629 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Ccdc60Q8C4J0 Btf3-205ENSMUST00000152704 888 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Ccdc60Q8C4J0 Mir3078-201ENSMUST00000175231 87 ntBASIC9.52□□□□□ -0.89
Ccdc60Q8C4J0 9430069I07Rik-201ENSMUST00000179647 336 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Ccdc60Q8C4J0 Gm8004-201ENSMUST00000187782 617 ntBASIC9.52□□□□□ -0.89
Ccdc60Q8C4J0 Gm5575-201ENSMUST00000190879 398 ntBASIC9.52□□□□□ -0.89
Ccdc60Q8C4J0 4930580E04Rik-201ENSMUST00000197377 690 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Ccdc60Q8C4J0 Gm36435-201ENSMUST00000213341 1178 ntTSL 5 BASIC9.52□□□□□ -0.89
Ccdc60Q8C4J0 Mif-ps7-201ENSMUST00000223357 327 ntBASIC9.52□□□□□ -0.89
Ccdc60Q8C4J0 AC125539.1-201ENSMUST00000227423 622 ntBASIC9.52□□□□□ -0.89
Ccdc60Q8C4J0 9430069I07Rik-202ENSMUST00000227772 572 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Ccdc60Q8C4J0 Olfr905-201ENSMUST00000051111 937 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Ccdc60Q8C4J0 Olfr609-201ENSMUST00000055787 965 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Ccdc60Q8C4J0 Olfr600-201ENSMUST00000056222 948 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Ccdc60Q8C4J0 Mrpl42-201ENSMUST00000075829 666 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Ccdc60Q8C4J0 Fbxw11-201ENSMUST00000076383 4019 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Ccdc60Q8C4J0 Zranb1-205ENSMUST00000215716 2205 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Ccdc60Q8C4J0 Slc5a7-201ENSMUST00000095712 5176 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Ccdc60Q8C4J0 Olfr316-202ENSMUST00000215071 2719 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Ccdc60Q8C4J0 Zfp438-201ENSMUST00000063989 3209 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Ccdc60Q8C4J0 Rmdn2-201ENSMUST00000040368 1802 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Ccdc60Q8C4J0 Fbxw20-201ENSMUST00000079548 1511 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ccdc60Q8C4J0 Alkbh8-201ENSMUST00000053407 3603 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ccdc60Q8C4J0 AC154828.1-201ENSMUST00000220696 2810 ntBASIC9.51□□□□□ -0.89
Ccdc60Q8C4J0 Nae1-211ENSMUST00000162466 1735 ntTSL 5 BASIC9.51□□□□□ -0.89
Ccdc60Q8C4J0 Olfr224-203ENSMUST00000216758 1742 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Ccdc60Q8C4J0 Mphosph9-211ENSMUST00000184951 5008 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Ccdc60Q8C4J0 Gm15759-201ENSMUST00000161126 3723 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Ccdc60Q8C4J0 Gm2654-201ENSMUST00000221381 1592 ntBASIC9.51□□□□□ -0.89
Ccdc60Q8C4J0 Irgm1-202ENSMUST00000097271 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ccdc60Q8C4J0 Stox2-202ENSMUST00000110367 3424 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Ccdc60Q8C4J0 Gm11282-201ENSMUST00000119018 1416 ntBASIC9.51□□□□□ -0.89
Ccdc60Q8C4J0 Gm20767-202ENSMUST00000225683 1427 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Ccdc60Q8C4J0 Med12l-202ENSMUST00000040325 10159 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Ccdc60Q8C4J0 Gm37022-201ENSMUST00000192517 2254 ntBASIC9.51□□□□□ -0.89
Ccdc60Q8C4J0 Gm24986-201ENSMUST00000104452 132 ntBASIC9.51□□□□□ -0.89
Ccdc60Q8C4J0 Gm15913-201ENSMUST00000118492 331 ntBASIC9.51□□□□□ -0.89
Ccdc60Q8C4J0 Gm15543-201ENSMUST00000141307 361 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Ccdc60Q8C4J0 Gm13421-202ENSMUST00000142511 803 ntTSL 3 BASIC9.51□□□□□ -0.89
Ccdc60Q8C4J0 Clec2i-204ENSMUST00000160867 933 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ccdc60Q8C4J0 Clec2i-205ENSMUST00000162666 1091 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ccdc60Q8C4J0 Mrpl24-201ENSMUST00000019854 1226 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ccdc60Q8C4J0 Gm7285-201ENSMUST00000198801 580 ntBASIC9.51□□□□□ -0.89
Ccdc60Q8C4J0 Gm34583-203ENSMUST00000202586 454 ntBASIC9.51□□□□□ -0.89
Ccdc60Q8C4J0 A730082K24Rik-202ENSMUST00000205795 658 ntTSL 3 BASIC9.51□□□□□ -0.89
Ccdc60Q8C4J0 Gm34474-201ENSMUST00000209645 356 ntTSL 5 BASIC9.51□□□□□ -0.89
Ccdc60Q8C4J0 Gm45309-201ENSMUST00000211528 695 ntTSL 3 BASIC9.51□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms