Protein–RNA interactions for Protein: Q7TPM3

Trim17, E3 ubiquitin-protein ligase TRIM17, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim17Q7TPM3 Thrb-201ENSMUST00000022303 4532 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Trim17Q7TPM3 Tprkb-201ENSMUST00000067137 2103 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Trim17Q7TPM3 Dock8-201ENSMUST00000025831 7810 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Trim17Q7TPM3 Magea5-202ENSMUST00000169540 1563 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Trim17Q7TPM3 Lix1-201ENSMUST00000115576 3116 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Trim17Q7TPM3 Crbn-202ENSMUST00000113239 2084 ntAPPRIS P4 TSL 1 (best) BASIC8.06□□□□□ -1.12
Trim17Q7TPM3 Cass4-202ENSMUST00000103073 3600 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Trim17Q7TPM3 Pax3-202ENSMUST00000087086 3863 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Trim17Q7TPM3 Gm37163-201ENSMUST00000195439 1690 ntBASIC8.06□□□□□ -1.12
Trim17Q7TPM3 Usp40-201ENSMUST00000040783 5049 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
Trim17Q7TPM3 Hspg2-203ENSMUST00000171332 14176 ntAPPRIS P2 TSL 5 BASIC8.06□□□□□ -1.12
Trim17Q7TPM3 Gm10401-201ENSMUST00000100848 607 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
Trim17Q7TPM3 Mir669e-201ENSMUST00000117003 119 ntBASIC8.06□□□□□ -1.12
Trim17Q7TPM3 Gm12455-201ENSMUST00000121242 416 ntBASIC8.06□□□□□ -1.12
Trim17Q7TPM3 Gm23077-201ENSMUST00000157854 116 ntBASIC8.06□□□□□ -1.12
Trim17Q7TPM3 Gm20637-201ENSMUST00000175715 462 ntBASIC8.06□□□□□ -1.12
Trim17Q7TPM3 Gm5973-201ENSMUST00000178542 496 ntBASIC8.06□□□□□ -1.12
Trim17Q7TPM3 Gm7763-201ENSMUST00000182220 1006 ntBASIC8.06□□□□□ -1.12
Trim17Q7TPM3 Gm20111-201ENSMUST00000184830 319 ntBASIC8.06□□□□□ -1.12
Trim17Q7TPM3 Gm29362-201ENSMUST00000187898 133 ntBASIC8.06□□□□□ -1.12
Trim17Q7TPM3 Gm43950-201ENSMUST00000204767 996 ntTSL 3 BASIC8.06□□□□□ -1.12
Trim17Q7TPM3 Gm44112-201ENSMUST00000204787 372 ntBASIC8.06□□□□□ -1.12
Trim17Q7TPM3 Gm44902-201ENSMUST00000206177 805 ntBASIC8.06□□□□□ -1.12
Trim17Q7TPM3 4930483O08Rik-201ENSMUST00000209850 1030 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Trim17Q7TPM3 Gm7546-202ENSMUST00000211354 275 ntBASIC8.06□□□□□ -1.12
Trim17Q7TPM3 4930503E24Rik-202ENSMUST00000219657 942 ntBASIC8.06□□□□□ -1.12
Trim17Q7TPM3 AC160863.3-201ENSMUST00000220129 1228 ntTSL 5 BASIC8.06□□□□□ -1.12
Trim17Q7TPM3 9230104L09Rik-201ENSMUST00000028937 661 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Trim17Q7TPM3 Trappc3l-201ENSMUST00000095758 1185 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Trim17Q7TPM3 Ceacam1-208ENSMUST00000206676 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Trim17Q7TPM3 Tnfrsf10b-201ENSMUST00000022663 3179 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Trim17Q7TPM3 Vwa3a-204ENSMUST00000166668 4409 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Trim17Q7TPM3 Krt39-202ENSMUST00000107445 1633 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Trim17Q7TPM3 Gm26920-201ENSMUST00000182746 2374 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
Trim17Q7TPM3 Mapk10-201ENSMUST00000086854 6630 ntAPPRIS ALT1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Trim17Q7TPM3 Ccnb1-202ENSMUST00000091295 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Trim17Q7TPM3 Acsm5-201ENSMUST00000066465 2981 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Trim17Q7TPM3 Mllt3-202ENSMUST00000126353 1956 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Trim17Q7TPM3 Abca4-201ENSMUST00000013995 7263 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Trim17Q7TPM3 Zfp239-207ENSMUST00000172088 2812 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
Trim17Q7TPM3 Trpm7-201ENSMUST00000028843 6985 ntAPPRIS ALT1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Trim17Q7TPM3 Gm10619-201ENSMUST00000098372 2695 ntTSL 5 BASIC8.06□□□□□ -1.12
Trim17Q7TPM3 Olfr554-203ENSMUST00000215995 2515 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Trim17Q7TPM3 Gm34777-201ENSMUST00000219688 2505 ntTSL 5 BASIC8.05□□□□□ -1.12
Trim17Q7TPM3 Zfp207-208ENSMUST00000188489 2898 ntAPPRIS ALT1 TSL 2 BASIC8.05□□□□□ -1.12
Trim17Q7TPM3 Clasp1-210ENSMUST00000188710 10265 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
Trim17Q7TPM3 Gm16427-201ENSMUST00000179091 1449 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
Trim17Q7TPM3 Cdc42-201ENSMUST00000030417 1448 ntAPPRIS ALT1 TSL 2 BASIC8.05□□□□□ -1.12
Trim17Q7TPM3 Zfp819-201ENSMUST00000032661 2362 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim17Q7TPM3 Cav1-202ENSMUST00000115453 2746 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Trim17Q7TPM3 Kyat3-202ENSMUST00000106218 1888 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim17Q7TPM3 Pglyrp4-203ENSMUST00000169698 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim17Q7TPM3 Slc3a1-201ENSMUST00000024944 2307 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim17Q7TPM3 Ighv5-6-201ENSMUST00000103446 353 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Trim17Q7TPM3 Gm22470-201ENSMUST00000104117 130 ntBASIC8.05□□□□□ -1.12
Trim17Q7TPM3 Rnf170-203ENSMUST00000110575 966 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Trim17Q7TPM3 Gm13744-201ENSMUST00000118953 850 ntBASIC8.05□□□□□ -1.12
Trim17Q7TPM3 Gm12601-201ENSMUST00000118994 846 ntBASIC8.05□□□□□ -1.12
Trim17Q7TPM3 Gm14329-201ENSMUST00000136027 591 ntTSL 3 BASIC8.05□□□□□ -1.12
Trim17Q7TPM3 Gm15124-201ENSMUST00000142053 953 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Trim17Q7TPM3 Gm13421-202ENSMUST00000142511 803 ntTSL 3 BASIC8.05□□□□□ -1.12
Trim17Q7TPM3 Gm12414-201ENSMUST00000150794 494 ntTSL 5 BASIC8.05□□□□□ -1.12
Trim17Q7TPM3 Gm26184-201ENSMUST00000157686 131 ntBASIC8.05□□□□□ -1.12
Trim17Q7TPM3 Gpx2-ps1-201ENSMUST00000160622 571 ntBASIC8.05□□□□□ -1.12
Trim17Q7TPM3 Gm17138-201ENSMUST00000165702 459 ntBASIC8.05□□□□□ -1.12
Trim17Q7TPM3 Polr2k-202ENSMUST00000180159 489 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim17Q7TPM3 C030010L15Rik-201ENSMUST00000181465 715 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Trim17Q7TPM3 1700066J03Rik-201ENSMUST00000181908 444 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Trim17Q7TPM3 Gm5835-201ENSMUST00000185806 1270 ntBASIC8.05□□□□□ -1.12
Trim17Q7TPM3 Gm38087-201ENSMUST00000193653 265 ntTSL 5 BASIC8.05□□□□□ -1.12
Trim17Q7TPM3 Gm37469-201ENSMUST00000193728 890 ntBASIC8.05□□□□□ -1.12
Trim17Q7TPM3 Gm5050-201ENSMUST00000197164 775 ntBASIC8.05□□□□□ -1.12
Trim17Q7TPM3 Gm43122-201ENSMUST00000201752 354 ntTSL 3 BASIC8.05□□□□□ -1.12
Trim17Q7TPM3 Gm19254-201ENSMUST00000204828 294 ntBASIC8.05□□□□□ -1.12
Trim17Q7TPM3 Gm6681-201ENSMUST00000205215 607 ntBASIC8.05□□□□□ -1.12
Trim17Q7TPM3 Gm4259-201ENSMUST00000206489 758 ntBASIC8.05□□□□□ -1.12
Trim17Q7TPM3 Gm45299-201ENSMUST00000210199 420 ntBASIC8.05□□□□□ -1.12
Trim17Q7TPM3 Gnb1-ps3-201ENSMUST00000212191 950 ntBASIC8.05□□□□□ -1.12
Trim17Q7TPM3 Gm8512-201ENSMUST00000215367 471 ntBASIC8.05□□□□□ -1.12
Trim17Q7TPM3 AC163667.2-201ENSMUST00000223769 791 ntBASIC8.05□□□□□ -1.12
Trim17Q7TPM3 CT010472.1-201ENSMUST00000224000 704 ntBASIC8.05□□□□□ -1.12
Trim17Q7TPM3 AC122397.3-201ENSMUST00000227097 527 ntBASIC8.05□□□□□ -1.12
Trim17Q7TPM3 AC107452.2-201ENSMUST00000228415 363 ntBASIC8.05□□□□□ -1.12
Trim17Q7TPM3 Cox20-201ENSMUST00000027781 471 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim17Q7TPM3 Olfr901-201ENSMUST00000063716 936 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Trim17Q7TPM3 Vmn1r188-201ENSMUST00000091739 927 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Trim17Q7TPM3 Mgam-202ENSMUST00000201148 6488 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim17Q7TPM3 Mgam-201ENSMUST00000071535 6488 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim17Q7TPM3 Gm36757-201ENSMUST00000221818 3556 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Trim17Q7TPM3 Gm6567-201ENSMUST00000205529 2095 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Trim17Q7TPM3 Gm16487-201ENSMUST00000105048 4037 ntBASIC8.05□□□□□ -1.12
Trim17Q7TPM3 Pknox2-202ENSMUST00000080754 3431 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim17Q7TPM3 B430306N03Rik-201ENSMUST00000049614 3996 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim17Q7TPM3 B230303O12Rik-201ENSMUST00000199119 3645 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Trim17Q7TPM3 Osbpl6-201ENSMUST00000077972 8037 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Trim17Q7TPM3 Kcnmb2-204ENSMUST00000191869 1552 ntTSL 5 BASIC8.05□□□□□ -1.12
Trim17Q7TPM3 Zscan26-202ENSMUST00000110485 4366 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Trim17Q7TPM3 Gm38251-201ENSMUST00000192968 2575 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Trim17Q7TPM3 AC122346.1-202ENSMUST00000225586 2116 ntBASIC8.05□□□□□ -1.12
Trim17Q7TPM3 Sec16b-201ENSMUST00000027881 4414 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms