Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 4930599A14Rik-201ENSMUST00000186724 387 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
ClpbQ60649 1700021A07Rik-202ENSMUST00000187763 485 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
ClpbQ60649 Gm5251-201ENSMUST00000188959 472 ntBASIC7.32□□□□□ -1.24
ClpbQ60649 Gm36961-201ENSMUST00000191980 132 ntBASIC7.32□□□□□ -1.24
ClpbQ60649 Shisa5-207ENSMUST00000197483 534 ntTSL 3 BASIC7.32□□□□□ -1.24
ClpbQ60649 Gm40304-201ENSMUST00000202154 268 ntTSL 3 BASIC7.32□□□□□ -1.24
ClpbQ60649 Gm18943-201ENSMUST00000207357 1216 ntBASIC7.32□□□□□ -1.24
ClpbQ60649 4933409F18Rik-201ENSMUST00000221910 1267 ntTSL 5 BASIC7.32□□□□□ -1.24
ClpbQ60649 AC163041.1-201ENSMUST00000221984 133 ntBASIC7.32□□□□□ -1.24
ClpbQ60649 CT009556.3-201ENSMUST00000226173 513 ntBASIC7.32□□□□□ -1.24
ClpbQ60649 FAM237A-201ENSMUST00000226288 1105 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
ClpbQ60649 Gm5815-201ENSMUST00000050706 1185 ntBASIC7.32□□□□□ -1.24
ClpbQ60649 Olfr1032-201ENSMUST00000062166 933 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
ClpbQ60649 Gm10123-201ENSMUST00000075723 490 ntBASIC7.32□□□□□ -1.24
ClpbQ60649 Gm24046-201ENSMUST00000083111 165 ntBASIC7.32□□□□□ -1.24
ClpbQ60649 Gm21977-201ENSMUST00000163725 1402 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
ClpbQ60649 Gm8068-201ENSMUST00000167440 1402 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
ClpbQ60649 Ank3-239ENSMUST00000183148 7404 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
ClpbQ60649 Olfr1199-203ENSMUST00000131038 2557 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
ClpbQ60649 Trrap-215ENSMUST00000213013 12398 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
ClpbQ60649 Gm15575-201ENSMUST00000119414 1581 ntBASIC7.32□□□□□ -1.24
ClpbQ60649 Gm14226-201ENSMUST00000130870 3243 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
ClpbQ60649 Cdh9-201ENSMUST00000026432 2892 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
ClpbQ60649 9630028H03Rik-201ENSMUST00000129868 2364 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
ClpbQ60649 CT009711.1-201ENSMUST00000223992 3040 ntBASIC7.32□□□□□ -1.24
ClpbQ60649 Gm32305-201ENSMUST00000221742 1899 ntTSL 5 BASIC7.32□□□□□ -1.24
ClpbQ60649 Hipk1-202ENSMUST00000106845 3967 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
ClpbQ60649 Fgf1-201ENSMUST00000040647 3981 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
ClpbQ60649 Ankrd49-206ENSMUST00000216372 2679 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
ClpbQ60649 Gm13262-201ENSMUST00000149014 2022 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
ClpbQ60649 Gm19583-201ENSMUST00000202993 1366 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
ClpbQ60649 Lrrfip2-206ENSMUST00000197241 1500 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
ClpbQ60649 Cpvl-203ENSMUST00000204674 1511 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
ClpbQ60649 AC164433.1-201ENSMUST00000226138 1544 ntBASIC7.32□□□□□ -1.24
ClpbQ60649 CT010505.3-201ENSMUST00000227835 1651 ntBASIC7.32□□□□□ -1.24
ClpbQ60649 Tpp1-201ENSMUST00000033184 3558 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
ClpbQ60649 Emsy-201ENSMUST00000038359 3564 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
ClpbQ60649 Zfp661-201ENSMUST00000077422 2765 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
ClpbQ60649 Jcad-201ENSMUST00000037029 6730 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
ClpbQ60649 Gm45194-202ENSMUST00000207962 1991 ntAPPRIS P5 TSL 5 BASIC7.31□□□□□ -1.24
ClpbQ60649 Kif24-202ENSMUST00000108055 5593 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
ClpbQ60649 Huwe1-201ENSMUST00000026292 14579 ntAPPRIS P2 TSL 1 (best) BASIC7.31□□□□□ -1.24
ClpbQ60649 9030607J07Rik-201ENSMUST00000202228 1622 ntBASIC7.31□□□□□ -1.24
ClpbQ60649 Olfr666-202ENSMUST00000214757 1949 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
ClpbQ60649 Stxbp4-202ENSMUST00000107872 2529 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
ClpbQ60649 Nyap2-201ENSMUST00000068275 4919 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
ClpbQ60649 Gm24541-201ENSMUST00000103871 96 ntBASIC7.31□□□□□ -1.24
ClpbQ60649 Gm24373-201ENSMUST00000104393 132 ntBASIC7.31□□□□□ -1.24
ClpbQ60649 Ggta1-205ENSMUST00000113002 3391 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
ClpbQ60649 Gm12365-201ENSMUST00000117931 568 ntBASIC7.31□□□□□ -1.24
ClpbQ60649 Gm4918-201ENSMUST00000119420 1084 ntBASIC7.31□□□□□ -1.24
ClpbQ60649 Gm23027-201ENSMUST00000158771 158 ntBASIC7.31□□□□□ -1.24
ClpbQ60649 Gm20430-201ENSMUST00000172474 207 ntBASIC7.31□□□□□ -1.24
ClpbQ60649 A530083I20Rik-202ENSMUST00000180877 1022 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
ClpbQ60649 Gm27177-204ENSMUST00000184491 602 ntTSL 3 BASIC7.31□□□□□ -1.24
ClpbQ60649 Gm29343-201ENSMUST00000187887 842 ntTSL 5 BASIC7.31□□□□□ -1.24
ClpbQ60649 Gm28728-201ENSMUST00000189087 405 ntBASIC7.31□□□□□ -1.24
ClpbQ60649 2610034O05Rik-201ENSMUST00000194078 855 ntBASIC7.31□□□□□ -1.24
ClpbQ60649 Tmigd3-204ENSMUST00000198080 832 ntAPPRIS P2 TSL 5 BASIC7.31□□□□□ -1.24
ClpbQ60649 Gm43351-201ENSMUST00000198737 326 ntTSL 5 BASIC7.31□□□□□ -1.24
ClpbQ60649 Gm40319-201ENSMUST00000199785 481 ntBASIC7.31□□□□□ -1.24
ClpbQ60649 Klra13-ps-203ENSMUST00000204367 850 ntBASIC7.31□□□□□ -1.24
ClpbQ60649 Ldah-206ENSMUST00000218086 1159 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
ClpbQ60649 D430020J02Rik-201ENSMUST00000220477 2941 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
ClpbQ60649 6030440G07Rik-201ENSMUST00000221849 1090 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
ClpbQ60649 Ccdc150-201ENSMUST00000027128 3807 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
ClpbQ60649 Ccdc54-201ENSMUST00000062439 1296 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
ClpbQ60649 Gm25852-201ENSMUST00000082790 130 ntBASIC7.31□□□□□ -1.24
ClpbQ60649 Haus2-203ENSMUST00000124187 3154 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
ClpbQ60649 Tdrkh-204ENSMUST00000196606 2586 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
ClpbQ60649 Gm37457-201ENSMUST00000193639 2433 ntBASIC7.31□□□□□ -1.24
ClpbQ60649 Gdi2-209ENSMUST00000223396 4303 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
ClpbQ60649 Phlpp2-201ENSMUST00000034175 7839 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
ClpbQ60649 Olfr332-201ENSMUST00000180165 3426 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
ClpbQ60649 Mms19-217ENSMUST00000171561 6607 ntAPPRIS P2 TSL 1 (best) BASIC7.31□□□□□ -1.24
ClpbQ60649 Exoc1-202ENSMUST00000087133 3371 ntAPPRIS P4 TSL 1 (best) BASIC7.31□□□□□ -1.24
ClpbQ60649 Kcna2-203ENSMUST00000197470 4370 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
ClpbQ60649 Adgrl3-211ENSMUST00000120128 6370 ntTSL 5 BASIC7.31□□□□□ -1.24
ClpbQ60649 Dgkb-201ENSMUST00000040500 6373 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
ClpbQ60649 Lemd1-205ENSMUST00000188169 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
ClpbQ60649 Mkks-201ENSMUST00000028730 2935 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
ClpbQ60649 Gm43681-201ENSMUST00000201581 1903 ntBASIC7.31□□□□□ -1.24
ClpbQ60649 A830082K12Rik-207ENSMUST00000183171 4176 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
ClpbQ60649 Gm42771-201ENSMUST00000198342 2486 ntBASIC7.3□□□□□ -1.24
ClpbQ60649 Gm28077-201ENSMUST00000190250 1635 ntTSL 5 BASIC7.3□□□□□ -1.24
ClpbQ60649 Nr1h5-203ENSMUST00000196983 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
ClpbQ60649 Gm5841-201ENSMUST00000195307 2177 ntBASIC7.3□□□□□ -1.24
ClpbQ60649 Vmn1r44-208ENSMUST00000227456 2031 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
ClpbQ60649 Sos2-203ENSMUST00000182396 3963 ntTSL 5 BASIC7.3□□□□□ -1.24
ClpbQ60649 Gm43747-201ENSMUST00000201412 1330 ntBASIC7.3□□□□□ -1.24
ClpbQ60649 Adgrb3-201ENSMUST00000041838 5059 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
ClpbQ60649 Gm43196-201ENSMUST00000201762 2114 ntBASIC7.3□□□□□ -1.24
ClpbQ60649 Ppp2r5c-202ENSMUST00000109832 4108 ntTSL 2 BASIC7.3□□□□□ -1.24
ClpbQ60649 Pfkfb3-214ENSMUST00000179584 4756 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
ClpbQ60649 Serpinb8-201ENSMUST00000000514 3001 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
ClpbQ60649 Gm24462-201ENSMUST00000102430 106 ntBASIC7.3□□□□□ -1.24
ClpbQ60649 Igkv1-117-201ENSMUST00000103317 404 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
ClpbQ60649 Fabp12-202ENSMUST00000117917 648 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
ClpbQ60649 Gm5761-201ENSMUST00000119238 834 ntBASIC7.3□□□□□ -1.24
ClpbQ60649 Gm12993-201ENSMUST00000119900 479 ntBASIC7.3□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 131.7 ms