Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 AC121793.1-201ENSMUST00000214211 633 ntTSL 5 BASIC9□□□□□ -0.97
Vps54Q5SPW0 AC118476.2-201ENSMUST00000215206 757 ntTSL 3 BASIC9□□□□□ -0.97
Vps54Q5SPW0 4930579P08Rik-201ENSMUST00000218193 1227 ntTSL 1 (best) BASIC9□□□□□ -0.97
Vps54Q5SPW0 CT030260.1-201ENSMUST00000223243 442 ntBASIC9□□□□□ -0.97
Vps54Q5SPW0 Gcnt2-204ENSMUST00000223570 335 ntBASIC9□□□□□ -0.97
Vps54Q5SPW0 AC161877.2-201ENSMUST00000226248 545 ntBASIC9□□□□□ -0.97
Vps54Q5SPW0 Fktn-201ENSMUST00000061771 3370 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Vps54Q5SPW0 Carf-206ENSMUST00000180952 2157 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
Vps54Q5SPW0 Hnrnpa3-203ENSMUST00000111962 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Vps54Q5SPW0 Gm37163-201ENSMUST00000195439 1690 ntBASIC9□□□□□ -0.97
Vps54Q5SPW0 P2ry14-201ENSMUST00000065220 1672 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Vps54Q5SPW0 Panct2-201ENSMUST00000181489 3849 ntTSL 1 (best) BASIC9□□□□□ -0.97
Vps54Q5SPW0 Scn8a-204ENSMUST00000108909 11436 ntTSL 5 BASIC9□□□□□ -0.97
Vps54Q5SPW0 Gm14085-201ENSMUST00000110521 3740 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Vps54Q5SPW0 D330045A20Rik-201ENSMUST00000046763 3737 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Vps54Q5SPW0 Armc2-203ENSMUST00000160262 4810 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Vps54Q5SPW0 Mcmdc2-201ENSMUST00000052843 2826 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Vps54Q5SPW0 Csmd2-205ENSMUST00000184063 13555 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Vps54Q5SPW0 Gm9866-206ENSMUST00000222838 1580 ntTSL 5 BASIC8.99□□□□□ -0.97
Vps54Q5SPW0 Rtp4-201ENSMUST00000038423 1573 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Vps54Q5SPW0 Gm45904-201ENSMUST00000213082 2330 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Vps54Q5SPW0 Amy1-202ENSMUST00000106540 1771 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Vps54Q5SPW0 Gpr22-203ENSMUST00000176710 1772 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Vps54Q5SPW0 Slc4a4-208ENSMUST00000156238 3494 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
Vps54Q5SPW0 CT030170.4-203ENSMUST00000221062 1403 ntTSL 5 BASIC8.99□□□□□ -0.97
Vps54Q5SPW0 Gm12661-201ENSMUST00000118780 3335 ntBASIC8.99□□□□□ -0.97
Vps54Q5SPW0 Gm3892-202ENSMUST00000178043 3539 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Vps54Q5SPW0 Gm10593-201ENSMUST00000178906 3539 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Vps54Q5SPW0 Oxtr-202ENSMUST00000204027 3721 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Vps54Q5SPW0 Vmn1r70-203ENSMUST00000226255 4868 ntAPPRIS P2 BASIC8.99□□□□□ -0.97
Vps54Q5SPW0 Ctnna2-202ENSMUST00000159626 3908 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Vps54Q5SPW0 Vmn1r44-213ENSMUST00000228700 2004 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
Vps54Q5SPW0 Specc1-207ENSMUST00000201364 4955 ntAPPRIS P4 TSL 5 BASIC8.99□□□□□ -0.97
Vps54Q5SPW0 A730036I17Rik-201ENSMUST00000143346 3431 ntTSL 2 BASIC8.99□□□□□ -0.97
Vps54Q5SPW0 Gm25614-201ENSMUST00000104013 133 ntBASIC8.99□□□□□ -0.97
Vps54Q5SPW0 Gm14201-201ENSMUST00000117627 289 ntBASIC8.99□□□□□ -0.97
Vps54Q5SPW0 Gm11865-201ENSMUST00000118093 859 ntBASIC8.99□□□□□ -0.97
Vps54Q5SPW0 Plxna4os3-202ENSMUST00000143328 277 ntTSL 3 BASIC8.99□□□□□ -0.97
Vps54Q5SPW0 Gm11551-201ENSMUST00000147438 410 ntTSL 2 BASIC8.99□□□□□ -0.97
Vps54Q5SPW0 Gm13840-201ENSMUST00000149608 256 ntTSL 2 BASIC8.99□□□□□ -0.97
Vps54Q5SPW0 Mir5100-201ENSMUST00000174993 64 ntBASIC8.99□□□□□ -0.97
Vps54Q5SPW0 Gm5300-201ENSMUST00000182201 1003 ntBASIC8.99□□□□□ -0.97
Vps54Q5SPW0 Mir8114-201ENSMUST00000183582 111 ntBASIC8.99□□□□□ -0.97
Vps54Q5SPW0 Gm28983-201ENSMUST00000186685 614 ntBASIC8.99□□□□□ -0.97
Vps54Q5SPW0 Gm28150-201ENSMUST00000187305 614 ntBASIC8.99□□□□□ -0.97
Vps54Q5SPW0 Gm28377-201ENSMUST00000189695 720 ntBASIC8.99□□□□□ -0.97
Vps54Q5SPW0 Gm7285-201ENSMUST00000198801 580 ntBASIC8.99□□□□□ -0.97
Vps54Q5SPW0 Gm34583-203ENSMUST00000202586 454 ntBASIC8.99□□□□□ -0.97
Vps54Q5SPW0 Gm18995-201ENSMUST00000202981 520 ntBASIC8.99□□□□□ -0.97
Vps54Q5SPW0 Cd69-203ENSMUST00000204411 560 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Vps54Q5SPW0 Gm44979-201ENSMUST00000206218 287 ntBASIC8.99□□□□□ -0.97
Vps54Q5SPW0 Gm31045-201ENSMUST00000211266 922 ntTSL 5 BASIC8.99□□□□□ -0.97
Vps54Q5SPW0 Rtp4-204ENSMUST00000211349 842 ntTSL 3 BASIC8.99□□□□□ -0.97
Vps54Q5SPW0 Gm33782-201ENSMUST00000218518 517 ntTSL 3 BASIC8.99□□□□□ -0.97
Vps54Q5SPW0 AC166361.1-201ENSMUST00000218567 403 ntTSL 3 BASIC8.99□□□□□ -0.97
Vps54Q5SPW0 AC154627.1-201ENSMUST00000228799 1286 ntBASIC8.99□□□□□ -0.97
Vps54Q5SPW0 Serpina3h-201ENSMUST00000049922 1239 ntTSL 5 BASIC8.99□□□□□ -0.97
Vps54Q5SPW0 Olfr600-201ENSMUST00000056222 948 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
Vps54Q5SPW0 Olfr544-201ENSMUST00000051201 3270 ntAPPRIS P1 TSL 2 BASIC8.99□□□□□ -0.97
Vps54Q5SPW0 Smpd4-204ENSMUST00000163476 4532 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Vps54Q5SPW0 Nt5c2-201ENSMUST00000086961 3745 ntTSL 5 BASIC8.99□□□□□ -0.97
Vps54Q5SPW0 Dctn4-204ENSMUST00000223984 2948 ntAPPRIS ALT1 BASIC8.99□□□□□ -0.97
Vps54Q5SPW0 AC154270.2-201ENSMUST00000226755 2306 ntBASIC8.99□□□□□ -0.97
Vps54Q5SPW0 A330076C08Rik-201ENSMUST00000220765 5020 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Vps54Q5SPW0 Cspp1-217ENSMUST00000186294 3429 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Vps54Q5SPW0 Gm5286-201ENSMUST00000159524 1593 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Vps54Q5SPW0 5330416C01Rik-203ENSMUST00000144993 3287 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Vps54Q5SPW0 Gpm6b-202ENSMUST00000112223 4764 ntAPPRIS ALT1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Vps54Q5SPW0 Mrpl17-202ENSMUST00000124482 7300 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Vps54Q5SPW0 Sim1-201ENSMUST00000020071 7355 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Vps54Q5SPW0 4921509C19Rik-201ENSMUST00000080132 2684 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Vps54Q5SPW0 Hecw2-203ENSMUST00000120904 11263 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Vps54Q5SPW0 Idh1-203ENSMUST00000169032 2283 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Vps54Q5SPW0 Fam114a1-201ENSMUST00000031080 2938 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Vps54Q5SPW0 6530403H02Rik-202ENSMUST00000182124 3191 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Vps54Q5SPW0 5330413P13Rik-202ENSMUST00000143453 3630 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Vps54Q5SPW0 Crnn-203ENSMUST00000195515 1863 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Vps54Q5SPW0 Vwde-202ENSMUST00000203074 5626 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Vps54Q5SPW0 Sulf1-201ENSMUST00000088585 4630 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Vps54Q5SPW0 Sgcg-201ENSMUST00000077954 3515 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Vps54Q5SPW0 Ttll4-202ENSMUST00000113678 3762 ntTSL 5 BASIC8.98□□□□□ -0.97
Vps54Q5SPW0 Gm11880-201ENSMUST00000117612 399 ntBASIC8.98□□□□□ -0.97
Vps54Q5SPW0 Gm8916-201ENSMUST00000119732 949 ntBASIC8.98□□□□□ -0.97
Vps54Q5SPW0 Cbx5-203ENSMUST00000122182 1146 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Vps54Q5SPW0 Gm2735-201ENSMUST00000136133 277 ntBASIC8.98□□□□□ -0.97
Vps54Q5SPW0 Obox3-ps4-201ENSMUST00000176026 1005 ntBASIC8.98□□□□□ -0.97
Vps54Q5SPW0 Gm20918-202ENSMUST00000188637 1227 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Vps54Q5SPW0 2010309G21Rik-201ENSMUST00000198927 458 ntTSL 3 BASIC8.98□□□□□ -0.97
Vps54Q5SPW0 Gm42813-201ENSMUST00000200057 615 ntTSL 3 BASIC8.98□□□□□ -0.97
Vps54Q5SPW0 Gm44418-201ENSMUST00000204219 705 ntTSL 3 BASIC8.98□□□□□ -0.97
Vps54Q5SPW0 Gm44931-201ENSMUST00000206056 545 ntBASIC8.98□□□□□ -0.97
Vps54Q5SPW0 Gm45198-201ENSMUST00000206796 591 ntBASIC8.98□□□□□ -0.97
Vps54Q5SPW0 Gm4780-201ENSMUST00000213206 1242 ntBASIC8.98□□□□□ -0.97
Vps54Q5SPW0 AC147245.1-201ENSMUST00000223294 677 ntBASIC8.98□□□□□ -0.97
Vps54Q5SPW0 Tmem213-201ENSMUST00000031851 631 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Vps54Q5SPW0 H2-M11-201ENSMUST00000041964 1006 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Vps54Q5SPW0 Psmf1-201ENSMUST00000042452 3809 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Vps54Q5SPW0 Lats2-203ENSMUST00000077981 786 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Vps54Q5SPW0 Gm1604a-201ENSMUST00000097422 781 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Vps54Q5SPW0 Olfr1012-201ENSMUST00000099916 936 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms