Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
HttP42859 B230364G03Rik-201ENSMUST00000181479 1374 ntTSL 2 BASIC7.68□□□□□ -1.18
HttP42859 Gm44763-201ENSMUST00000208287 2019 ntBASIC7.68□□□□□ -1.18
HttP42859 AC158605.4-201ENSMUST00000219013 3361 ntBASIC7.68□□□□□ -1.18
HttP42859 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
HttP42859 4930431P03Rik-204ENSMUST00000228169 1967 ntBASIC7.68□□□□□ -1.18
HttP42859 Clasp1-221ENSMUST00000191823 3916 ntTSL 5 BASIC7.68□□□□□ -1.18
HttP42859 Gm44116-201ENSMUST00000204269 1525 ntBASIC7.68□□□□□ -1.18
HttP42859 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC7.67□□□□□ -1.18
HttP42859 4932413F04Rik-201ENSMUST00000190332 2765 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
HttP42859 Gm14529-201ENSMUST00000117894 406 ntBASIC7.67□□□□□ -1.18
HttP42859 Rpl22-ps1-201ENSMUST00000118652 386 ntBASIC7.67□□□□□ -1.18
HttP42859 Gm14466-201ENSMUST00000119028 451 ntBASIC7.67□□□□□ -1.18
HttP42859 Rps29-ps-201ENSMUST00000122083 172 ntBASIC7.67□□□□□ -1.18
HttP42859 Gm12147-201ENSMUST00000144024 182 ntTSL 3 BASIC7.67□□□□□ -1.18
HttP42859 1700012I11Rik-201ENSMUST00000187233 1039 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
HttP42859 Gm5711-201ENSMUST00000197896 421 ntBASIC7.67□□□□□ -1.18
HttP42859 Uqcrh-202ENSMUST00000078676 547 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
HttP42859 Gm25515-201ENSMUST00000083858 157 ntBASIC7.67□□□□□ -1.18
HttP42859 Bpifc-201ENSMUST00000061699 2714 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
HttP42859 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
HttP42859 Arsj-201ENSMUST00000093976 3859 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
HttP42859 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
HttP42859 Itgam-202ENSMUST00000106240 3325 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
HttP42859 Ccnyl1-201ENSMUST00000094898 2923 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
HttP42859 Fate1-202ENSMUST00000114569 1053 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
HttP42859 Gm20702-201ENSMUST00000176181 460 ntBASIC7.67□□□□□ -1.18
HttP42859 Lockd-204ENSMUST00000184991 243 ntTSL 5 BASIC7.67□□□□□ -1.18
HttP42859 1810053B23Rik-202ENSMUST00000185364 590 ntTSL 3 BASIC7.67□□□□□ -1.18
HttP42859 Gm3511-201ENSMUST00000199823 204 ntBASIC7.67□□□□□ -1.18
HttP42859 AC172989.1-201ENSMUST00000226387 513 ntBASIC7.67□□□□□ -1.18
HttP42859 Olfr610-201ENSMUST00000063109 948 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
HttP42859 Fate1-201ENSMUST00000066116 938 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
HttP42859 Tnni3k-201ENSMUST00000064076 3034 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
HttP42859 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC7.67□□□□□ -1.18
HttP42859 Grk3-201ENSMUST00000065167 6533 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
HttP42859 Tmcc1-203ENSMUST00000172510 2612 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
HttP42859 Epn2-213ENSMUST00000179936 4452 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
HttP42859 Mrpl48-201ENSMUST00000064334 1865 ntBASIC7.67□□□□□ -1.18
HttP42859 AC154171.3-201ENSMUST00000224519 2505 ntBASIC7.67□□□□□ -1.18
HttP42859 Trbv23-201ENSMUST00000103279 344 ntAPPRIS ALT2 BASIC7.67□□□□□ -1.18
HttP42859 Stau2-208ENSMUST00000144138 585 ntTSL 5 BASIC7.67□□□□□ -1.18
HttP42859 1700020M21Rik-201ENSMUST00000188320 644 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
HttP42859 Gm37669-201ENSMUST00000192184 820 ntBASIC7.67□□□□□ -1.18
HttP42859 Ccl2-201ENSMUST00000000193 813 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
HttP42859 AC154558.1-201ENSMUST00000222278 415 ntBASIC7.67□□□□□ -1.18
HttP42859 Reg1-201ENSMUST00000079926 769 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
HttP42859 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
HttP42859 Prkcz-202ENSMUST00000103178 4083 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
HttP42859 Usp40-204ENSMUST00000187758 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
HttP42859 Tbpl2-201ENSMUST00000080453 1379 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
HttP42859 Usp17lc-201ENSMUST00000079348 1697 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
HttP42859 Gm45828-201ENSMUST00000206938 1836 ntBASIC7.66□□□□□ -1.18
HttP42859 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
HttP42859 Sycp1-202ENSMUST00000196988 3189 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
HttP42859 2900064K03Rik-201ENSMUST00000196567 3113 ntBASIC7.66□□□□□ -1.18
HttP42859 F13b-201ENSMUST00000027615 2379 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
HttP42859 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
HttP42859 Gm3510-201ENSMUST00000180447 1455 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
HttP42859 Ppp2r5c-202ENSMUST00000109832 4108 ntTSL 2 BASIC7.66□□□□□ -1.18
HttP42859 Grhl1-201ENSMUST00000020985 3070 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
HttP42859 Gm4319-201ENSMUST00000191139 2048 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
HttP42859 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
HttP42859 Pum2-204ENSMUST00000163569 3560 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
HttP42859 Gm13333-201ENSMUST00000119424 781 ntBASIC7.66□□□□□ -1.18
HttP42859 Gm22529-201ENSMUST00000158817 123 ntBASIC7.66□□□□□ -1.18
HttP42859 Pde1c-207ENSMUST00000168944 2126 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
HttP42859 Gm26784-201ENSMUST00000181666 410 ntBASIC7.66□□□□□ -1.18
HttP42859 Gm29144-201ENSMUST00000189235 339 ntBASIC7.66□□□□□ -1.18
HttP42859 Gm28607-201ENSMUST00000190142 339 ntBASIC7.66□□□□□ -1.18
HttP42859 Gm28121-201ENSMUST00000191420 339 ntBASIC7.66□□□□□ -1.18
HttP42859 AC165256.1-201ENSMUST00000216687 670 ntTSL 2 BASIC7.66□□□□□ -1.18
HttP42859 Trappc3l-201ENSMUST00000095758 1185 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
HttP42859 Gm26806-201ENSMUST00000180403 1519 ntTSL 5 BASIC7.66□□□□□ -1.18
HttP42859 Apod-203ENSMUST00000130560 2074 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
HttP42859 Sycp2l-201ENSMUST00000124093 2641 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
HttP42859 Cxcr2-202ENSMUST00000106899 3046 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
HttP42859 Mageb18-202ENSMUST00000113955 2163 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
HttP42859 AC163040.2-201ENSMUST00000223462 3534 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
HttP42859 Gm13262-201ENSMUST00000149014 2022 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
HttP42859 Gm26939-201ENSMUST00000177146 2261 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
HttP42859 Spry4-201ENSMUST00000025295 4587 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
HttP42859 Olfr193-203ENSMUST00000208455 2855 ntAPPRIS P1 TSL 3 BASIC7.66□□□□□ -1.18
HttP42859 Prdm10-205ENSMUST00000215847 3519 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
HttP42859 Pdgfd-201ENSMUST00000058692 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
HttP42859 Gm14418-201ENSMUST00000108955 1415 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
HttP42859 Olfr212-203ENSMUST00000220134 2349 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
HttP42859 2610203C22Rik-204ENSMUST00000148585 3475 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
HttP42859 D630011A20Rik-201ENSMUST00000180858 500 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
HttP42859 Gm6556-201ENSMUST00000181118 362 ntTSL 5 BASIC7.66□□□□□ -1.18
HttP42859 Gm26942-201ENSMUST00000182854 797 ntBASIC7.66□□□□□ -1.18
HttP42859 Gm44239-201ENSMUST00000204228 271 ntBASIC7.66□□□□□ -1.18
HttP42859 Gm44930-201ENSMUST00000207545 489 ntTSL 5 BASIC7.66□□□□□ -1.18
HttP42859 Gm18851-201ENSMUST00000210087 1058 ntBASIC7.66□□□□□ -1.18
HttP42859 5033421B08Rik-202ENSMUST00000219595 1194 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
HttP42859 Gm18409-202ENSMUST00000220105 529 ntBASIC7.66□□□□□ -1.18
HttP42859 AC137902.1-201ENSMUST00000228184 102 ntBASIC7.66□□□□□ -1.18
HttP42859 Gm42827-201ENSMUST00000197058 1515 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
HttP42859 Fam107a-201ENSMUST00000036070 3151 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
HttP42859 Afm-201ENSMUST00000113179 2038 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 77.4 ms