Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm36991-201ENSMUST00000191800 648 ntBASIC8.87□□□□□ -0.99
Traf1P39428 Gm19331-201ENSMUST00000193799 1092 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Traf1P39428 Gm31305-201ENSMUST00000198557 710 ntTSL 3 BASIC8.87□□□□□ -0.99
Traf1P39428 Gm43558-201ENSMUST00000200155 210 ntBASIC8.87□□□□□ -0.99
Traf1P39428 Gm43226-201ENSMUST00000202438 259 ntBASIC8.87□□□□□ -0.99
Traf1P39428 Gm45509-201ENSMUST00000209624 1229 ntBASIC8.87□□□□□ -0.99
Traf1P39428 2700097O09Rik-201ENSMUST00000021406 1105 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Traf1P39428 AL590616.1-201ENSMUST00000223339 574 ntBASIC8.87□□□□□ -0.99
Traf1P39428 AC154487.1-201ENSMUST00000224649 226 ntBASIC8.87□□□□□ -0.99
Traf1P39428 AC140267.1-201ENSMUST00000226485 213 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Traf1P39428 Rxfp1-201ENSMUST00000078527 5382 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Traf1P39428 Olfr285-202ENSMUST00000216901 5330 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
Traf1P39428 Dusp18-201ENSMUST00000055931 4632 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Traf1P39428 Gm43961-201ENSMUST00000203289 1872 ntBASIC8.87□□□□□ -0.99
Traf1P39428 Ube3c-204ENSMUST00000199032 3171 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Traf1P39428 Kcnj15-203ENSMUST00000113855 5128 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Traf1P39428 Stard9-201ENSMUST00000070420 4874 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Traf1P39428 A730049H05Rik-201ENSMUST00000057977 2239 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Traf1P39428 Ncald-203ENSMUST00000119730 3295 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Traf1P39428 Etl4-206ENSMUST00000114608 6635 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
Traf1P39428 Gm4673-201ENSMUST00000181395 3660 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Traf1P39428 Tars2-203ENSMUST00000098857 3228 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Traf1P39428 Fktn-201ENSMUST00000061771 3370 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Traf1P39428 Cd44-206ENSMUST00000111192 1305 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
Traf1P39428 Olfr523-205ENSMUST00000215785 4165 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
Traf1P39428 Gucy1a3-201ENSMUST00000048976 4554 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Traf1P39428 Gm43023-201ENSMUST00000197583 2106 ntBASIC8.86□□□□□ -0.99
Traf1P39428 Zfp420-201ENSMUST00000057652 2744 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Traf1P39428 Pwp2-201ENSMUST00000042556 3872 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Traf1P39428 Casr-203ENSMUST00000172826 3659 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Traf1P39428 Gm12800-201ENSMUST00000075999 1455 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Traf1P39428 Ifna14-201ENSMUST00000102808 570 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Traf1P39428 Gm12955-201ENSMUST00000119689 957 ntBASIC8.86□□□□□ -0.99
Traf1P39428 Gm14465-201ENSMUST00000120603 567 ntBASIC8.86□□□□□ -0.99
Traf1P39428 Gm16057-201ENSMUST00000120811 759 ntBASIC8.86□□□□□ -0.99
Traf1P39428 Pfn2-204ENSMUST00000122210 810 ntTSL 3 BASIC8.86□□□□□ -0.99
Traf1P39428 Hnf1aos1-203ENSMUST00000131845 740 ntTSL 3 BASIC8.86□□□□□ -0.99
Traf1P39428 Gm17057-201ENSMUST00000169887 591 ntTSL 3 BASIC8.86□□□□□ -0.99
Traf1P39428 Gm22408-201ENSMUST00000174925 65 ntBASIC8.86□□□□□ -0.99
Traf1P39428 Smarca2-204ENSMUST00000175791 946 ntTSL 3 BASIC8.86□□□□□ -0.99
Traf1P39428 Obox3-ps4-201ENSMUST00000176026 1005 ntBASIC8.86□□□□□ -0.99
Traf1P39428 Gm28114-201ENSMUST00000187232 379 ntBASIC8.86□□□□□ -0.99
Traf1P39428 4931428L18Rik-203ENSMUST00000187659 423 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Traf1P39428 Gm29435-201ENSMUST00000191310 689 ntBASIC8.86□□□□□ -0.99
Traf1P39428 Gm28548-201ENSMUST00000191599 409 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Traf1P39428 Gm18428-201ENSMUST00000194986 791 ntBASIC8.86□□□□□ -0.99
Traf1P39428 Oaz3-207ENSMUST00000204913 689 ntTSL 5 BASIC8.86□□□□□ -0.99
Traf1P39428 Gm17995-201ENSMUST00000209266 530 ntBASIC8.86□□□□□ -0.99
Traf1P39428 Olfr472-202ENSMUST00000210420 1083 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Traf1P39428 AC163296.1-202ENSMUST00000218395 661 ntBASIC8.86□□□□□ -0.99
Traf1P39428 AC163296.1-201ENSMUST00000220004 1266 ntBASIC8.86□□□□□ -0.99
Traf1P39428 CT030260.1-201ENSMUST00000223243 442 ntBASIC8.86□□□□□ -0.99
Traf1P39428 Olfr680-ps1-201ENSMUST00000042676 936 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Traf1P39428 Olfr905-201ENSMUST00000051111 937 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Traf1P39428 Olfr984-201ENSMUST00000056795 945 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Traf1P39428 Gm22748-201ENSMUST00000082493 136 ntBASIC8.86□□□□□ -0.99
Traf1P39428 Zfp979-202ENSMUST00000105720 2594 ntAPPRIS P1 TSL 2 BASIC8.86□□□□□ -0.99
Traf1P39428 Gm45360-201ENSMUST00000210698 1405 ntBASIC8.86□□□□□ -0.99
Traf1P39428 Serpind1-201ENSMUST00000023450 2191 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Traf1P39428 Slc7a2-204ENSMUST00000118432 3681 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Traf1P39428 AC153564.1-201ENSMUST00000217771 3607 ntTSL 5 BASIC8.86□□□□□ -0.99
Traf1P39428 Olfr381-204ENSMUST00000215358 2658 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Traf1P39428 Plxna2-201ENSMUST00000027952 11040 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Traf1P39428 Gm14085-201ENSMUST00000110521 3740 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Traf1P39428 Olfr131-204ENSMUST00000216523 1714 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Traf1P39428 Kcnma1-224ENSMUST00000224077 3537 ntAPPRIS ALT2 BASIC8.85□□□□□ -0.99
Traf1P39428 Gm45182-201ENSMUST00000207579 2404 ntBASIC8.85□□□□□ -0.99
Traf1P39428 Rttn-201ENSMUST00000023828 7268 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Traf1P39428 Slfn5-201ENSMUST00000067443 5979 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Traf1P39428 Gm26575-201ENSMUST00000181714 2232 ntBASIC8.85□□□□□ -0.99
Traf1P39428 AC164883.2-201ENSMUST00000227931 3815 ntBASIC8.85□□□□□ -0.99
Traf1P39428 Tdrkh-202ENSMUST00000166032 5692 ntAPPRIS P2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Traf1P39428 Gm6284-201ENSMUST00000209609 4287 ntBASIC8.85□□□□□ -0.99
Traf1P39428 Pdzd9-201ENSMUST00000033178 2180 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Traf1P39428 Eml1-201ENSMUST00000054955 3879 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Traf1P39428 Sgcg-201ENSMUST00000077954 3515 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Traf1P39428 Gm10376-201ENSMUST00000100694 555 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
Traf1P39428 Cdc42se1-202ENSMUST00000107199 652 ntTSL 5 BASIC8.85□□□□□ -0.99
Traf1P39428 Npm1-204ENSMUST00000109354 1157 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Traf1P39428 Gm14509-201ENSMUST00000117312 1286 ntBASIC8.85□□□□□ -0.99
Traf1P39428 Gm14450-201ENSMUST00000119984 240 ntBASIC8.85□□□□□ -0.99
Traf1P39428 Gm4340-201ENSMUST00000163113 807 ntAPPRIS ALT2 BASIC8.85□□□□□ -0.99
Traf1P39428 Gm8624-202ENSMUST00000165677 669 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Traf1P39428 Ly6k-202ENSMUST00000168815 612 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Traf1P39428 4833412C05Rik-201ENSMUST00000181235 1083 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Traf1P39428 Gm29015-201ENSMUST00000187147 207 ntTSL 5 BASIC8.85□□□□□ -0.99
Traf1P39428 Gm7436-201ENSMUST00000187229 391 ntBASIC8.85□□□□□ -0.99
Traf1P39428 Gm29230-201ENSMUST00000189687 412 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Traf1P39428 Gm28140-201ENSMUST00000190148 1271 ntTSL 5 BASIC8.85□□□□□ -0.99
Traf1P39428 Cnn3-203ENSMUST00000197135 1242 ntTSL 5 BASIC8.85□□□□□ -0.99
Traf1P39428 4633401B06Rik-201ENSMUST00000198169 1073 ntBASIC8.85□□□□□ -0.99
Traf1P39428 Gm18765-201ENSMUST00000203166 660 ntBASIC8.85□□□□□ -0.99
Traf1P39428 Gm45216-201ENSMUST00000205547 600 ntTSL 3 BASIC8.85□□□□□ -0.99
Traf1P39428 Gm45370-201ENSMUST00000211274 483 ntTSL 5 BASIC8.85□□□□□ -0.99
Traf1P39428 AC160966.1-203ENSMUST00000214689 1186 ntTSL 5 BASIC8.85□□□□□ -0.99
Traf1P39428 Gm33778-201ENSMUST00000216884 704 ntBASIC8.85□□□□□ -0.99
Traf1P39428 Gm9118-201ENSMUST00000219246 754 ntBASIC8.85□□□□□ -0.99
Traf1P39428 Ly6c1-201ENSMUST00000065408 844 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
Traf1P39428 Cbx3-202ENSMUST00000094623 1080 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Traf1P39428 Gm1604a-201ENSMUST00000097422 781 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms