Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Cox8c-201ENSMUST00000053611 458 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Nup35Q8R4R6 Krtap7-1-201ENSMUST00000056118 620 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Nup35Q8R4R6 Gm8623-201ENSMUST00000071573 436 ntBASIC6.05□□□□□ -1.44
Nup35Q8R4R6 1700001C19Rik-202ENSMUST00000073143 614 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
Nup35Q8R4R6 Glipr1-201ENSMUST00000074805 1081 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Nup35Q8R4R6 Olfr1280-201ENSMUST00000082167 1003 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Nup35Q8R4R6 n-R5s193-201ENSMUST00000082864 109 ntBASIC6.05□□□□□ -1.44
Nup35Q8R4R6 Gm16410-201ENSMUST00000094550 774 ntBASIC6.05□□□□□ -1.44
Nup35Q8R4R6 1700026J12Rik-201ENSMUST00000098226 1127 ntTSL 5 BASIC6.05□□□□□ -1.44
Nup35Q8R4R6 Olfr472-201ENSMUST00000209670 5290 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
Nup35Q8R4R6 Trp63-202ENSMUST00000065523 5257 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Nup35Q8R4R6 Ppp1r9a-212ENSMUST00000177456 3975 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Nup35Q8R4R6 Teddm1b-201ENSMUST00000055314 2527 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Nup35Q8R4R6 Itga1-201ENSMUST00000061673 10967 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Nup35Q8R4R6 Sestd1-202ENSMUST00000102660 8990 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Nup35Q8R4R6 Spire1-201ENSMUST00000045105 5033 ntAPPRIS P2 TSL 5 BASIC6.05□□□□□ -1.44
Nup35Q8R4R6 Aldh1l2-206ENSMUST00000146640 3938 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Nup35Q8R4R6 Gimd1-201ENSMUST00000163241 1413 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Nup35Q8R4R6 Tex28-201ENSMUST00000078060 1420 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Nup35Q8R4R6 Senp1-201ENSMUST00000044189 6575 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Nup35Q8R4R6 Olfr457-202ENSMUST00000203396 4404 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
Nup35Q8R4R6 Wdr19-201ENSMUST00000041892 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Nup35Q8R4R6 Olfr435-202ENSMUST00000215565 2491 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Nup35Q8R4R6 Tcf4-202ENSMUST00000078486 7147 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Nup35Q8R4R6 Maml2-201ENSMUST00000034401 2098 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Nup35Q8R4R6 Gm42969-201ENSMUST00000199858 3631 ntBASIC6.05□□□□□ -1.44
Nup35Q8R4R6 Gm12021-201ENSMUST00000121061 1746 ntBASIC6.05□□□□□ -1.44
Nup35Q8R4R6 Gm43873-201ENSMUST00000204505 3938 ntBASIC6.05□□□□□ -1.44
Nup35Q8R4R6 D030045P18Rik-201ENSMUST00000213245 1892 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Nup35Q8R4R6 Olfr60-202ENSMUST00000210932 2383 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
Nup35Q8R4R6 Vmn1r58-204ENSMUST00000228728 9991 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Nup35Q8R4R6 Crtam-204ENSMUST00000188848 5001 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
Nup35Q8R4R6 Plch1-210ENSMUST00000162269 6539 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Nup35Q8R4R6 Sec24c-202ENSMUST00000223751 4196 ntBASIC6.04□□□□□ -1.44
Nup35Q8R4R6 Chd9-205ENSMUST00000209423 9419 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Nup35Q8R4R6 Gm45112-201ENSMUST00000208576 5125 ntBASIC6.04□□□□□ -1.44
Nup35Q8R4R6 Gm45084-201ENSMUST00000207096 1957 ntBASIC6.04□□□□□ -1.44
Nup35Q8R4R6 Gm43022-201ENSMUST00000197067 4268 ntBASIC6.04□□□□□ -1.44
Nup35Q8R4R6 Phc1-208ENSMUST00000160696 4213 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
Nup35Q8R4R6 Ddx18-201ENSMUST00000001724 2258 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Nup35Q8R4R6 Dcdc5-201ENSMUST00000037284 3093 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Nup35Q8R4R6 Gm14762-201ENSMUST00000105109 1771 ntBASIC6.04□□□□□ -1.44
Nup35Q8R4R6 Gm29571-201ENSMUST00000191547 1909 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Nup35Q8R4R6 C87499-201ENSMUST00000053304 1901 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Nup35Q8R4R6 Ptpn22-201ENSMUST00000029433 2743 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Nup35Q8R4R6 Myo1h-205ENSMUST00000169347 3545 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Nup35Q8R4R6 Alpk1-206ENSMUST00000198955 4498 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Nup35Q8R4R6 Ceacam1-203ENSMUST00000098669 2873 ntAPPRIS P3 TSL 5 BASIC6.04□□□□□ -1.44
Nup35Q8R4R6 Igkv8-21-201ENSMUST00000103387 382 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Nup35Q8R4R6 Gm24335-201ENSMUST00000104211 132 ntBASIC6.04□□□□□ -1.44
Nup35Q8R4R6 Pilrb1-201ENSMUST00000110978 1020 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Nup35Q8R4R6 Gm13573-201ENSMUST00000116410 631 ntBASIC6.04□□□□□ -1.44
Nup35Q8R4R6 Gm16140-201ENSMUST00000117191 1060 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Nup35Q8R4R6 Gm12133-201ENSMUST00000121775 661 ntBASIC6.04□□□□□ -1.44
Nup35Q8R4R6 Olfr999-ps1-201ENSMUST00000122319 949 ntBASIC6.04□□□□□ -1.44
Nup35Q8R4R6 Bnip1-206ENSMUST00000135824 629 ntTSL 5 BASIC6.04□□□□□ -1.44
Nup35Q8R4R6 Smim26-201ENSMUST00000136628 471 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Nup35Q8R4R6 Gm3513-201ENSMUST00000161319 637 ntTSL 3 BASIC6.04□□□□□ -1.44
Nup35Q8R4R6 Klrc3-202ENSMUST00000170148 712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Nup35Q8R4R6 Gm10012-202ENSMUST00000170379 372 ntBASIC6.04□□□□□ -1.44
Nup35Q8R4R6 Obox2-203ENSMUST00000174076 782 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Nup35Q8R4R6 Gm27008-202ENSMUST00000182414 604 ntTSL 3 BASIC6.04□□□□□ -1.44
Nup35Q8R4R6 Gm28421-201ENSMUST00000186378 356 ntTSL 5 BASIC6.04□□□□□ -1.44
Nup35Q8R4R6 Gm28355-201ENSMUST00000187443 356 ntTSL 5 BASIC6.04□□□□□ -1.44
Nup35Q8R4R6 9330159M07Rik-204ENSMUST00000188156 737 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Nup35Q8R4R6 Gm34217-201ENSMUST00000193562 356 ntTSL 5 BASIC6.04□□□□□ -1.44
Nup35Q8R4R6 4633401B06Rik-201ENSMUST00000198169 1073 ntBASIC6.04□□□□□ -1.44
Nup35Q8R4R6 Gm7285-201ENSMUST00000198801 580 ntBASIC6.04□□□□□ -1.44
Nup35Q8R4R6 Gm6312-201ENSMUST00000204060 1194 ntBASIC6.04□□□□□ -1.44
Nup35Q8R4R6 Pvrig-201ENSMUST00000211088 1080 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Nup35Q8R4R6 AC132474.3-201ENSMUST00000213244 383 ntTSL 5 BASIC6.04□□□□□ -1.44
Nup35Q8R4R6 Gm35412-201ENSMUST00000220437 999 ntBASIC6.04□□□□□ -1.44
Nup35Q8R4R6 AC163038.1-201ENSMUST00000223632 1142 ntBASIC6.04□□□□□ -1.44
Nup35Q8R4R6 AC129975.2-201ENSMUST00000223705 775 ntBASIC6.04□□□□□ -1.44
Nup35Q8R4R6 AC154760.1-201ENSMUST00000227218 673 ntBASIC6.04□□□□□ -1.44
Nup35Q8R4R6 Rpl22l1-201ENSMUST00000043867 552 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
Nup35Q8R4R6 Dppa5a-201ENSMUST00000071991 619 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Nup35Q8R4R6 Olfr539-201ENSMUST00000078967 960 ntAPPRIS P2 BASIC6.04□□□□□ -1.44
Nup35Q8R4R6 Gm8882-201ENSMUST00000080849 1240 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Nup35Q8R4R6 Gm44863-201ENSMUST00000207613 1422 ntBASIC6.04□□□□□ -1.44
Nup35Q8R4R6 Vmn1r57-204ENSMUST00000228062 2365 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Nup35Q8R4R6 Blm-201ENSMUST00000081314 4598 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
Nup35Q8R4R6 Gm13040-201ENSMUST00000094521 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Nup35Q8R4R6 Gm5431-202ENSMUST00000109210 2971 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Nup35Q8R4R6 Gm45753-201ENSMUST00000116473 2753 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
Nup35Q8R4R6 A830010M20Rik-204ENSMUST00000112671 6756 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Nup35Q8R4R6 Gm37968-201ENSMUST00000195131 3201 ntBASIC6.04□□□□□ -1.44
Nup35Q8R4R6 Grip1-208ENSMUST00000138410 3532 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
Nup35Q8R4R6 4930516K23Rik-201ENSMUST00000074064 6133 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Nup35Q8R4R6 Eci2-203ENSMUST00000110251 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Nup35Q8R4R6 9530052C20Rik-201ENSMUST00000181882 1372 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Nup35Q8R4R6 BC028471-203ENSMUST00000202022 4113 ntTSL 2 BASIC6.04□□□□□ -1.44
Nup35Q8R4R6 Hdac9-205ENSMUST00000209902 7940 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Nup35Q8R4R6 Slco1a4-201ENSMUST00000032364 2252 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
Nup35Q8R4R6 Gm15681-201ENSMUST00000137501 2704 ntBASIC6.04□□□□□ -1.44
Nup35Q8R4R6 4632404H12Rik-202ENSMUST00000195940 4671 ntBASIC6.04□□□□□ -1.44
Nup35Q8R4R6 Gm42678-201ENSMUST00000197163 2221 ntBASIC6.03□□□□□ -1.44
Nup35Q8R4R6 Gm4952-201ENSMUST00000092931 2212 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Nup35Q8R4R6 Skint7-201ENSMUST00000055014 1788 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
Nup35Q8R4R6 Dnajc18-201ENSMUST00000025208 5169 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 74.9 ms