Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Gm15462-201ENSMUST00000133653 4580 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Cchcr1Q8K2I2 Gm21152-201ENSMUST00000190271 3483 ntBASIC8.89□□□□□ -0.99
Cchcr1Q8K2I2 Tcf7l2-210ENSMUST00000111657 4126 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
Cchcr1Q8K2I2 Gm29555-201ENSMUST00000188620 1497 ntTSL 5 BASIC8.89□□□□□ -0.99
Cchcr1Q8K2I2 Apbb1ip-201ENSMUST00000014290 2773 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Cchcr1Q8K2I2 Slc5a9-202ENSMUST00000102720 3393 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Cchcr1Q8K2I2 4930442L01Rik-201ENSMUST00000145865 2077 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Cchcr1Q8K2I2 Kcnu1-202ENSMUST00000120653 1446 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Cchcr1Q8K2I2 Kcnab1-201ENSMUST00000049230 3245 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Cchcr1Q8K2I2 Phf7-206ENSMUST00000228437 1373 ntBASIC8.88□□□□□ -0.99
Cchcr1Q8K2I2 Gm37552-201ENSMUST00000193939 2520 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Cchcr1Q8K2I2 Cmah-209ENSMUST00000224953 2221 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
Cchcr1Q8K2I2 Gm37077-201ENSMUST00000195723 3691 ntBASIC8.88□□□□□ -0.99
Cchcr1Q8K2I2 Agbl1-203ENSMUST00000156166 3369 ntAPPRIS P2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Cchcr1Q8K2I2 Sp1-201ENSMUST00000001326 7754 ntAPPRIS P2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Cchcr1Q8K2I2 Adgrl2-205ENSMUST00000196526 5615 ntTSL 5 BASIC8.88□□□□□ -0.99
Cchcr1Q8K2I2 Gm32305-201ENSMUST00000221742 1899 ntTSL 5 BASIC8.88□□□□□ -0.99
Cchcr1Q8K2I2 Mylk3-203ENSMUST00000122452 3036 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Cchcr1Q8K2I2 Gm26734-201ENSMUST00000181769 1594 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Cchcr1Q8K2I2 Arhgap32-201ENSMUST00000168954 8703 ntTSL 5 BASIC8.88□□□□□ -0.99
Cchcr1Q8K2I2 Zfp846-202ENSMUST00000115557 12974 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Cchcr1Q8K2I2 Gm22022-201ENSMUST00000104355 127 ntBASIC8.88□□□□□ -0.99
Cchcr1Q8K2I2 Bdnf-203ENSMUST00000111043 3839 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Cchcr1Q8K2I2 Gm15422-201ENSMUST00000117453 541 ntBASIC8.88□□□□□ -0.99
Cchcr1Q8K2I2 Gm15124-201ENSMUST00000142053 953 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Cchcr1Q8K2I2 Gm16143-201ENSMUST00000155982 538 ntTSL 5 BASIC8.88□□□□□ -0.99
Cchcr1Q8K2I2 Gm24530-201ENSMUST00000157948 288 ntBASIC8.88□□□□□ -0.99
Cchcr1Q8K2I2 Gm8164-201ENSMUST00000169120 1192 ntBASIC8.88□□□□□ -0.99
Cchcr1Q8K2I2 Gm22408-201ENSMUST00000174925 65 ntBASIC8.88□□□□□ -0.99
Cchcr1Q8K2I2 Gm24307-201ENSMUST00000178512 101 ntBASIC8.88□□□□□ -0.99
Cchcr1Q8K2I2 Gm27595-201ENSMUST00000184579 112 ntBASIC8.88□□□□□ -0.99
Cchcr1Q8K2I2 Gm28264-201ENSMUST00000190657 398 ntTSL 5 BASIC8.88□□□□□ -0.99
Cchcr1Q8K2I2 Ms4a10-203ENSMUST00000191343 862 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Cchcr1Q8K2I2 Gm37481-201ENSMUST00000195176 403 ntBASIC8.88□□□□□ -0.99
Cchcr1Q8K2I2 Gm40319-201ENSMUST00000199785 481 ntBASIC8.88□□□□□ -0.99
Cchcr1Q8K2I2 Crcp-206ENSMUST00000202756 600 ntTSL 2 BASIC8.88□□□□□ -0.99
Cchcr1Q8K2I2 Gm34225-203ENSMUST00000206921 572 ntTSL 5 BASIC8.88□□□□□ -0.99
Cchcr1Q8K2I2 Gm18469-201ENSMUST00000208850 439 ntBASIC8.88□□□□□ -0.99
Cchcr1Q8K2I2 Gm45338-205ENSMUST00000210795 728 ntTSL 5 BASIC8.88□□□□□ -0.99
Cchcr1Q8K2I2 4930471E19Rik-202ENSMUST00000219150 737 ntTSL 3 BASIC8.88□□□□□ -0.99
Cchcr1Q8K2I2 AC124687.5-201ENSMUST00000222734 596 ntTSL 5 BASIC8.88□□□□□ -0.99
Cchcr1Q8K2I2 AC154785.1-201ENSMUST00000223280 572 ntBASIC8.88□□□□□ -0.99
Cchcr1Q8K2I2 AC163038.4-201ENSMUST00000224942 474 ntBASIC8.88□□□□□ -0.99
Cchcr1Q8K2I2 Cthrc1-204ENSMUST00000226433 596 ntBASIC8.88□□□□□ -0.99
Cchcr1Q8K2I2 AC129537.1-202ENSMUST00000226619 430 ntBASIC8.88□□□□□ -0.99
Cchcr1Q8K2I2 Cypt2-201ENSMUST00000041758 697 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Cchcr1Q8K2I2 Ms4a10-201ENSMUST00000072748 1011 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Cchcr1Q8K2I2 Vpreb2-201ENSMUST00000075371 429 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Cchcr1Q8K2I2 Olfr557-201ENSMUST00000098218 1057 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
Cchcr1Q8K2I2 Cmtr2-201ENSMUST00000056972 3545 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Cchcr1Q8K2I2 Gm6823-201ENSMUST00000120791 1839 ntBASIC8.88□□□□□ -0.99
Cchcr1Q8K2I2 Gm36823-203ENSMUST00000199408 1792 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Cchcr1Q8K2I2 Csrnp3-201ENSMUST00000053910 4495 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
Cchcr1Q8K2I2 Cnr1-202ENSMUST00000084736 5761 ntAPPRIS P1 TSL 2 BASIC8.88□□□□□ -0.99
Cchcr1Q8K2I2 Olfr521-202ENSMUST00000219663 2277 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Cchcr1Q8K2I2 Olfr521-203ENSMUST00000220001 2254 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Cchcr1Q8K2I2 A230001M10Rik-203ENSMUST00000198712 1747 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Cchcr1Q8K2I2 Kif24-201ENSMUST00000030148 4333 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Cchcr1Q8K2I2 Ctxn3-201ENSMUST00000091892 1441 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Cchcr1Q8K2I2 D030045P18Rik-203ENSMUST00000214947 1938 ntTSL 5 BASIC8.88□□□□□ -0.99
Cchcr1Q8K2I2 Olfr225-202ENSMUST00000213169 2658 ntAPPRIS P5 TSL 5 BASIC8.87□□□□□ -0.99
Cchcr1Q8K2I2 2810414N06Rik-201ENSMUST00000186444 1381 ntTSL 2 BASIC8.87□□□□□ -0.99
Cchcr1Q8K2I2 Zfp85os-201ENSMUST00000049518 2624 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Cchcr1Q8K2I2 Calcrl-201ENSMUST00000074262 4882 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Cchcr1Q8K2I2 4930402H24Rik-201ENSMUST00000044766 6628 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
Cchcr1Q8K2I2 Stxbp4-202ENSMUST00000107872 2529 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Cchcr1Q8K2I2 Gm43429-201ENSMUST00000197889 2251 ntBASIC8.87□□□□□ -0.99
Cchcr1Q8K2I2 2210408I21Rik-202ENSMUST00000225605 1539 ntBASIC8.87□□□□□ -0.99
Cchcr1Q8K2I2 Rgs4-201ENSMUST00000027991 2941 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Cchcr1Q8K2I2 Phlpp2-201ENSMUST00000034175 7839 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Cchcr1Q8K2I2 Olfr460-202ENSMUST00000216942 3370 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
Cchcr1Q8K2I2 Gm16056-201ENSMUST00000119293 135 ntBASIC8.87□□□□□ -0.99
Cchcr1Q8K2I2 Gm16407-201ENSMUST00000122134 567 ntBASIC8.87□□□□□ -0.99
Cchcr1Q8K2I2 Gm15092-201ENSMUST00000138467 574 ntTSL 5 BASIC8.87□□□□□ -0.99
Cchcr1Q8K2I2 Gm23007-201ENSMUST00000158951 177 ntBASIC8.87□□□□□ -0.99
Cchcr1Q8K2I2 Ggact-204ENSMUST00000161322 524 ntTSL 2 BASIC8.87□□□□□ -0.99
Cchcr1Q8K2I2 Trav9n-3-201ENSMUST00000177705 575 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Cchcr1Q8K2I2 Trav9d-3-201ENSMUST00000178252 575 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Cchcr1Q8K2I2 Gm15013-202ENSMUST00000183728 801 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Cchcr1Q8K2I2 Mir6415-201ENSMUST00000184064 100 ntBASIC8.87□□□□□ -0.99
Cchcr1Q8K2I2 Gm43539-201ENSMUST00000196190 363 ntTSL 3 BASIC8.87□□□□□ -0.99
Cchcr1Q8K2I2 Mrps33-204ENSMUST00000201461 717 ntTSL 2 BASIC8.87□□□□□ -0.99
Cchcr1Q8K2I2 Gm34474-201ENSMUST00000209645 356 ntTSL 5 BASIC8.87□□□□□ -0.99
Cchcr1Q8K2I2 Gm18192-201ENSMUST00000210174 941 ntBASIC8.87□□□□□ -0.99
Cchcr1Q8K2I2 Gm45432-201ENSMUST00000210391 416 ntBASIC8.87□□□□□ -0.99
Cchcr1Q8K2I2 Olfr664-202ENSMUST00000211596 921 ntAPPRIS ALT2 BASIC8.87□□□□□ -0.99
Cchcr1Q8K2I2 AC153845.1-201ENSMUST00000213596 428 ntBASIC8.87□□□□□ -0.99
Cchcr1Q8K2I2 4930415O20Rik-201ENSMUST00000023728 558 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Cchcr1Q8K2I2 Olfr1211-201ENSMUST00000099808 936 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Cchcr1Q8K2I2 Samd3-206ENSMUST00000220219 1744 ntAPPRIS P4 TSL 5 BASIC8.87□□□□□ -0.99
Cchcr1Q8K2I2 Sfmbt2-205ENSMUST00000116594 7821 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
Cchcr1Q8K2I2 Htt-201ENSMUST00000080036 13215 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Cchcr1Q8K2I2 Itgb3bp-204ENSMUST00000146258 2806 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Cchcr1Q8K2I2 Slc26a2-201ENSMUST00000037603 2802 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Cchcr1Q8K2I2 Gm26555-202ENSMUST00000180882 3726 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Cchcr1Q8K2I2 Gm8204-201ENSMUST00000185696 2144 ntBASIC8.87□□□□□ -0.99
Cchcr1Q8K2I2 Rxfp1-201ENSMUST00000078527 5382 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Cchcr1Q8K2I2 Mfap1b-201ENSMUST00000056732 3362 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Cchcr1Q8K2I2 Fbxw11-201ENSMUST00000076383 4019 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Cchcr1Q8K2I2 Gm37364-201ENSMUST00000192533 3920 ntBASIC8.86□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 77.6 ms