Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm13915-201ENSMUST00000119314 931 ntBASIC8.93□□□□□ -0.98
Nup88Q8CEC0 Gm11383-201ENSMUST00000121346 807 ntBASIC8.93□□□□□ -0.98
Nup88Q8CEC0 4930412C18Rik-202ENSMUST00000138390 3839 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Nup88Q8CEC0 Gm22224-201ENSMUST00000157357 93 ntBASIC8.93□□□□□ -0.98
Nup88Q8CEC0 Gm22948-201ENSMUST00000158561 243 ntBASIC8.93□□□□□ -0.98
Nup88Q8CEC0 Cd180-202ENSMUST00000167144 430 ntTSL 2 BASIC8.93□□□□□ -0.98
Nup88Q8CEC0 Vmn1r-ps18-201ENSMUST00000176901 876 ntBASIC8.93□□□□□ -0.98
Nup88Q8CEC0 Gm5300-201ENSMUST00000182201 1003 ntBASIC8.93□□□□□ -0.98
Nup88Q8CEC0 Gm27177-204ENSMUST00000184491 602 ntTSL 3 BASIC8.93□□□□□ -0.98
Nup88Q8CEC0 Gm27187-202ENSMUST00000184873 606 ntTSL 3 BASIC8.93□□□□□ -0.98
Nup88Q8CEC0 Gm28894-201ENSMUST00000185214 615 ntBASIC8.93□□□□□ -0.98
Nup88Q8CEC0 Gm28208-201ENSMUST00000185941 1157 ntTSL 5 BASIC8.93□□□□□ -0.98
Nup88Q8CEC0 Gm29672-201ENSMUST00000187118 1038 ntTSL 5 BASIC8.93□□□□□ -0.98
Nup88Q8CEC0 Gm28114-201ENSMUST00000187232 379 ntBASIC8.93□□□□□ -0.98
Nup88Q8CEC0 Gm29362-201ENSMUST00000187898 133 ntBASIC8.93□□□□□ -0.98
Nup88Q8CEC0 Gm28853-202ENSMUST00000188084 1157 ntTSL 5 BASIC8.93□□□□□ -0.98
Nup88Q8CEC0 Gm28864-201ENSMUST00000189251 644 ntBASIC8.93□□□□□ -0.98
Nup88Q8CEC0 Gm4785-201ENSMUST00000191025 751 ntBASIC8.93□□□□□ -0.98
Nup88Q8CEC0 Gm28430-201ENSMUST00000191031 628 ntTSL 5 BASIC8.93□□□□□ -0.98
Nup88Q8CEC0 Gm28133-202ENSMUST00000191344 1158 ntTSL 5 BASIC8.93□□□□□ -0.98
Nup88Q8CEC0 Gm37799-201ENSMUST00000194018 547 ntTSL 3 BASIC8.93□□□□□ -0.98
Nup88Q8CEC0 Gm37369-201ENSMUST00000194179 615 ntBASIC8.93□□□□□ -0.98
Nup88Q8CEC0 Gm4259-201ENSMUST00000206489 758 ntBASIC8.93□□□□□ -0.98
Nup88Q8CEC0 9530078K11Rik-201ENSMUST00000208883 694 ntBASIC8.93□□□□□ -0.98
Nup88Q8CEC0 Gm7151-201ENSMUST00000211511 954 ntBASIC8.93□□□□□ -0.98
Nup88Q8CEC0 Erh-204ENSMUST00000218364 665 ntTSL 3 BASIC8.93□□□□□ -0.98
Nup88Q8CEC0 AC152940.1-201ENSMUST00000226504 139 ntBASIC8.93□□□□□ -0.98
Nup88Q8CEC0 Med21-201ENSMUST00000032429 814 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Nup88Q8CEC0 6030452D12Rik-201ENSMUST00000066875 669 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Nup88Q8CEC0 Fam126b-202ENSMUST00000097724 4581 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Nup88Q8CEC0 Dph5-201ENSMUST00000043342 1576 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Nup88Q8CEC0 Gm6823-201ENSMUST00000120791 1839 ntBASIC8.93□□□□□ -0.98
Nup88Q8CEC0 Cyp2c39-201ENSMUST00000025968 1817 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Nup88Q8CEC0 Gm14802-201ENSMUST00000121944 1885 ntBASIC8.93□□□□□ -0.98
Nup88Q8CEC0 Olfr1324-202ENSMUST00000215270 5679 ntAPPRIS ALT2 TSL 2 BASIC8.93□□□□□ -0.98
Nup88Q8CEC0 Gm26967-201ENSMUST00000182878 2303 ntBASIC8.93□□□□□ -0.98
Nup88Q8CEC0 Erp44-201ENSMUST00000030028 2624 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Nup88Q8CEC0 Serbp1-201ENSMUST00000042990 15474 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
Nup88Q8CEC0 Zfp438-201ENSMUST00000063989 3209 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Nup88Q8CEC0 Mxi1-203ENSMUST00000111737 4843 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Nup88Q8CEC0 Zfp626-202ENSMUST00000205671 5329 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Nup88Q8CEC0 Gphn-202ENSMUST00000110388 3300 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Nup88Q8CEC0 5330416C01Rik-203ENSMUST00000144993 3287 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Nup88Q8CEC0 Mlip-215ENSMUST00000185144 2921 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
Nup88Q8CEC0 Cxcl9-201ENSMUST00000113093 2889 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Nup88Q8CEC0 Gm14120-201ENSMUST00000129067 2869 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Nup88Q8CEC0 2010310C07Rik-201ENSMUST00000187172 2226 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Nup88Q8CEC0 Gm28867-201ENSMUST00000190194 2166 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Nup88Q8CEC0 F930017D23Rik-202ENSMUST00000213342 2141 ntTSL 5 BASIC8.92□□□□□ -0.98
Nup88Q8CEC0 Zbtb43-202ENSMUST00000095035 4925 ntTSL 5 BASIC8.92□□□□□ -0.98
Nup88Q8CEC0 Dusp18-201ENSMUST00000055931 4632 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Nup88Q8CEC0 CT009480.1-201ENSMUST00000225771 4480 ntBASIC8.92□□□□□ -0.98
Nup88Q8CEC0 Gm16506-201ENSMUST00000165553 1405 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Nup88Q8CEC0 AC159624.1-201ENSMUST00000217762 1344 ntBASIC8.92□□□□□ -0.98
Nup88Q8CEC0 Npm1-203ENSMUST00000101375 966 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Nup88Q8CEC0 Gm9493-201ENSMUST00000104916 579 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
Nup88Q8CEC0 Gmfg-202ENSMUST00000108289 477 ntTSL 3 BASIC8.92□□□□□ -0.98
Nup88Q8CEC0 Gm17184-201ENSMUST00000111864 462 ntBASIC8.92□□□□□ -0.98
Nup88Q8CEC0 Gm14465-201ENSMUST00000120603 567 ntBASIC8.92□□□□□ -0.98
Nup88Q8CEC0 Babam2-205ENSMUST00000131995 1220 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Nup88Q8CEC0 Gm15792-201ENSMUST00000137099 769 ntTSL 3 BASIC8.92□□□□□ -0.98
Nup88Q8CEC0 Gm11962-201ENSMUST00000145746 255 ntBASIC8.92□□□□□ -0.98
Nup88Q8CEC0 Gm2026-203ENSMUST00000174416 532 ntTSL 3 BASIC8.92□□□□□ -0.98
Nup88Q8CEC0 Gm5181-201ENSMUST00000183140 971 ntBASIC8.92□□□□□ -0.98
Nup88Q8CEC0 Gm36961-201ENSMUST00000191980 132 ntBASIC8.92□□□□□ -0.98
Nup88Q8CEC0 1700047G07Rik-202ENSMUST00000212351 842 ntTSL 5 BASIC8.92□□□□□ -0.98
Nup88Q8CEC0 AC160338.3-201ENSMUST00000214836 384 ntBASIC8.92□□□□□ -0.98
Nup88Q8CEC0 4930584E12Rik-201ENSMUST00000216646 981 ntBASIC8.92□□□□□ -0.98
Nup88Q8CEC0 Gm7441-201ENSMUST00000220697 1074 ntBASIC8.92□□□□□ -0.98
Nup88Q8CEC0 AC165155.1-201ENSMUST00000228932 445 ntBASIC8.92□□□□□ -0.98
Nup88Q8CEC0 Mphosph6-201ENSMUST00000034303 1068 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Nup88Q8CEC0 Olfr609-201ENSMUST00000055787 965 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
Nup88Q8CEC0 Olfr120-201ENSMUST00000077498 993 ntBASIC8.92□□□□□ -0.98
Nup88Q8CEC0 Grik2-204ENSMUST00000218441 3083 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Nup88Q8CEC0 Abraxas2-201ENSMUST00000084497 2892 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Nup88Q8CEC0 Olfr1199-203ENSMUST00000131038 2557 ntAPPRIS P1 TSL 2 BASIC8.92□□□□□ -0.98
Nup88Q8CEC0 Pogz-203ENSMUST00000107266 4100 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
Nup88Q8CEC0 Hipk1-202ENSMUST00000106845 3967 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Nup88Q8CEC0 Gm36283-203ENSMUST00000220211 3732 ntTSL 5 BASIC8.92□□□□□ -0.98
Nup88Q8CEC0 2610028E06Rik-205ENSMUST00000156350 3623 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Nup88Q8CEC0 Sgo1-201ENSMUST00000024736 3628 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Nup88Q8CEC0 Kcnab1-201ENSMUST00000049230 3245 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Nup88Q8CEC0 Cenpi-201ENSMUST00000081064 3227 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Nup88Q8CEC0 Frmpd4-201ENSMUST00000112145 7924 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
Nup88Q8CEC0 Sla-202ENSMUST00000164163 2952 ntAPPRIS P3 TSL 5 BASIC8.91□□□□□ -0.98
Nup88Q8CEC0 Pcm1-204ENSMUST00000211247 6484 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Nup88Q8CEC0 Npffr2-201ENSMUST00000048557 1643 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Nup88Q8CEC0 Cdk1-201ENSMUST00000020099 4375 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Nup88Q8CEC0 AC166341.5-201ENSMUST00000222206 1400 ntBASIC8.91□□□□□ -0.98
Nup88Q8CEC0 Ankrd66-201ENSMUST00000178772 1321 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Nup88Q8CEC0 Igkv4-51-201ENSMUST00000103345 394 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
Nup88Q8CEC0 Gm22022-201ENSMUST00000104355 127 ntBASIC8.91□□□□□ -0.98
Nup88Q8CEC0 Ola1-203ENSMUST00000112055 1251 ntTSL 5 BASIC8.91□□□□□ -0.98
Nup88Q8CEC0 Gm13163-201ENSMUST00000119875 336 ntBASIC8.91□□□□□ -0.98
Nup88Q8CEC0 Gm14319-201ENSMUST00000142937 703 ntTSL 2 BASIC8.91□□□□□ -0.98
Nup88Q8CEC0 Tvp23bos-201ENSMUST00000148598 1011 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Nup88Q8CEC0 Gm13619-201ENSMUST00000155722 2138 ntTSL 2 BASIC8.91□□□□□ -0.98
Nup88Q8CEC0 Scarna17-201ENSMUST00000158064 79 ntBASIC8.91□□□□□ -0.98
Nup88Q8CEC0 Gm16573-201ENSMUST00000160334 801 ntTSL 3 BASIC8.91□□□□□ -0.98
Nup88Q8CEC0 Gm16580-201ENSMUST00000162696 1044 ntBASIC8.91□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 89.3 ms