Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Gm31036-201ENSMUST00000212925 521 ntTSL 3 BASIC8.6□□□□□ -1.03
Pcdhb7Q8CDY9 AC167250.1-202ENSMUST00000213629 672 ntTSL 3 BASIC8.6□□□□□ -1.03
Pcdhb7Q8CDY9 Gm6477-201ENSMUST00000217098 764 ntBASIC8.6□□□□□ -1.03
Pcdhb7Q8CDY9 Olfr108-202ENSMUST00000218675 1038 ntAPPRIS P2 BASIC8.6□□□□□ -1.03
Pcdhb7Q8CDY9 Abracl-203ENSMUST00000218994 425 ntAPPRIS P1 TSL 2 BASIC8.6□□□□□ -1.03
Pcdhb7Q8CDY9 AC154904.1-201ENSMUST00000219510 312 ntBASIC8.6□□□□□ -1.03
Pcdhb7Q8CDY9 Nqo2-203ENSMUST00000220844 957 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Pcdhb7Q8CDY9 AC167669.3-201ENSMUST00000224720 393 ntBASIC8.6□□□□□ -1.03
Pcdhb7Q8CDY9 AC146601.1-201ENSMUST00000227910 905 ntBASIC8.6□□□□□ -1.03
Pcdhb7Q8CDY9 Il1f6-201ENSMUST00000028361 883 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Pcdhb7Q8CDY9 8030411F24Rik-201ENSMUST00000028933 602 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Pcdhb7Q8CDY9 Olfr460-201ENSMUST00000051540 1061 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Pcdhb7Q8CDY9 Trap1a-201ENSMUST00000054534 1178 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Pcdhb7Q8CDY9 Olfr108-201ENSMUST00000078207 1038 ntAPPRIS ALT2 BASIC8.6□□□□□ -1.03
Pcdhb7Q8CDY9 Olfr893-201ENSMUST00000093867 942 ntAPPRIS P2 BASIC8.6□□□□□ -1.03
Pcdhb7Q8CDY9 Ano3-201ENSMUST00000099623 6705 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Pcdhb7Q8CDY9 Dync1i2-203ENSMUST00000112136 2548 ntAPPRIS ALT1 TSL 5 BASIC8.6□□□□□ -1.03
Pcdhb7Q8CDY9 Ankrd6-201ENSMUST00000035719 4683 ntAPPRIS P2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Pcdhb7Q8CDY9 Kidins220-210ENSMUST00000222941 6277 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
Pcdhb7Q8CDY9 Zc2hc1a-203ENSMUST00000193010 1420 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Pcdhb7Q8CDY9 Epb41-201ENSMUST00000030739 6565 ntAPPRIS P3 TSL 5 BASIC8.6□□□□□ -1.03
Pcdhb7Q8CDY9 Hmcn2-201ENSMUST00000113532 15646 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Pcdhb7Q8CDY9 Olfm5-201ENSMUST00000051137 2268 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Pcdhb7Q8CDY9 Pkd1l1-203ENSMUST00000178195 6213 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
Pcdhb7Q8CDY9 Grip1-210ENSMUST00000144825 3250 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Pcdhb7Q8CDY9 Ston2-203ENSMUST00000164713 2944 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
Pcdhb7Q8CDY9 Cep135-201ENSMUST00000049060 5313 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Pcdhb7Q8CDY9 Gm42847-201ENSMUST00000201732 2553 ntBASIC8.6□□□□□ -1.03
Pcdhb7Q8CDY9 Slc24a2-201ENSMUST00000044990 2218 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Pcdhb7Q8CDY9 Nol12-203ENSMUST00000138880 3717 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Pcdhb7Q8CDY9 Medag-202ENSMUST00000201083 2669 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Pcdhb7Q8CDY9 Sf3b1-201ENSMUST00000027127 6195 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Pcdhb7Q8CDY9 Kcns3-203ENSMUST00000217974 2314 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Pcdhb7Q8CDY9 Gm6117-201ENSMUST00000150540 1333 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Pcdhb7Q8CDY9 Zfp445-201ENSMUST00000056467 2961 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Pcdhb7Q8CDY9 Gm43544-201ENSMUST00000196474 2472 ntBASIC8.59□□□□□ -1.03
Pcdhb7Q8CDY9 Prune2-207ENSMUST00000225351 2115 ntBASIC8.59□□□□□ -1.03
Pcdhb7Q8CDY9 Gm43776-201ENSMUST00000199729 2914 ntBASIC8.59□□□□□ -1.03
Pcdhb7Q8CDY9 Kcnd2-201ENSMUST00000081542 5152 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Pcdhb7Q8CDY9 Olfr978-202ENSMUST00000217600 1790 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Pcdhb7Q8CDY9 4931406B18Rik-208ENSMUST00000191516 2566 ntAPPRIS P2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Pcdhb7Q8CDY9 Reg3a-201ENSMUST00000101272 825 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Pcdhb7Q8CDY9 Ighv1-56-201ENSMUST00000103527 294 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
Pcdhb7Q8CDY9 Gm22471-201ENSMUST00000104116 130 ntBASIC8.59□□□□□ -1.03
Pcdhb7Q8CDY9 Gm3055-201ENSMUST00000105316 720 ntTSL 5 BASIC8.59□□□□□ -1.03
Pcdhb7Q8CDY9 Rpl17-ps8-201ENSMUST00000118924 621 ntBASIC8.59□□□□□ -1.03
Pcdhb7Q8CDY9 Gm5943-201ENSMUST00000119458 459 ntBASIC8.59□□□□□ -1.03
Pcdhb7Q8CDY9 Romo1-204ENSMUST00000119950 379 ntAPPRIS P1 TSL 2 BASIC8.59□□□□□ -1.03
Pcdhb7Q8CDY9 Mup-ps4-201ENSMUST00000151005 539 ntBASIC8.59□□□□□ -1.03
Pcdhb7Q8CDY9 4933427D06Rik-202ENSMUST00000153517 522 ntTSL 5 BASIC8.59□□□□□ -1.03
Pcdhb7Q8CDY9 Sectm1b-207ENSMUST00000170381 1011 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Pcdhb7Q8CDY9 Gm18128-201ENSMUST00000172625 511 ntBASIC8.59□□□□□ -1.03
Pcdhb7Q8CDY9 Mir3100-201ENSMUST00000174918 65 ntBASIC8.59□□□□□ -1.03
Pcdhb7Q8CDY9 Slc35a5-205ENSMUST00000181177 865 ntTSL 3 BASIC8.59□□□□□ -1.03
Pcdhb7Q8CDY9 Gm2693-201ENSMUST00000189119 571 ntBASIC8.59□□□□□ -1.03
Pcdhb7Q8CDY9 Gm28414-201ENSMUST00000190111 294 ntBASIC8.59□□□□□ -1.03
Pcdhb7Q8CDY9 Gm37383-201ENSMUST00000191750 745 ntBASIC8.59□□□□□ -1.03
Pcdhb7Q8CDY9 Gm23377-202ENSMUST00000196828 138 ntBASIC8.59□□□□□ -1.03
Pcdhb7Q8CDY9 Gm36520-201ENSMUST00000200449 400 ntTSL 3 BASIC8.59□□□□□ -1.03
Pcdhb7Q8CDY9 Gm43846-201ENSMUST00000200502 932 ntBASIC8.59□□□□□ -1.03
Pcdhb7Q8CDY9 Ube2n-ps1-201ENSMUST00000201768 459 ntBASIC8.59□□□□□ -1.03
Pcdhb7Q8CDY9 Gm43922-201ENSMUST00000205071 328 ntBASIC8.59□□□□□ -1.03
Pcdhb7Q8CDY9 Gm5338-201ENSMUST00000209530 639 ntBASIC8.59□□□□□ -1.03
Pcdhb7Q8CDY9 Gm39132-201ENSMUST00000210446 429 ntTSL 3 BASIC8.59□□□□□ -1.03
Pcdhb7Q8CDY9 4933439N14Rik-201ENSMUST00000211062 1087 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Pcdhb7Q8CDY9 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC8.59□□□□□ -1.03
Pcdhb7Q8CDY9 AC140409.3-201ENSMUST00000215601 358 ntTSL 3 BASIC8.59□□□□□ -1.03
Pcdhb7Q8CDY9 Gm19161-201ENSMUST00000217958 737 ntBASIC8.59□□□□□ -1.03
Pcdhb7Q8CDY9 Gm18631-201ENSMUST00000223125 1043 ntBASIC8.59□□□□□ -1.03
Pcdhb7Q8CDY9 AC163667.2-201ENSMUST00000223769 791 ntBASIC8.59□□□□□ -1.03
Pcdhb7Q8CDY9 3830408C21Rik-203ENSMUST00000224293 822 ntBASIC8.59□□□□□ -1.03
Pcdhb7Q8CDY9 AC164116.1-201ENSMUST00000225810 622 ntBASIC8.59□□□□□ -1.03
Pcdhb7Q8CDY9 Smr3a-201ENSMUST00000031211 635 ntAPPRIS P2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Pcdhb7Q8CDY9 Mlip-201ENSMUST00000034910 1227 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Pcdhb7Q8CDY9 Zfp781-201ENSMUST00000076281 732 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Pcdhb7Q8CDY9 Tonsl-201ENSMUST00000078803 885 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Pcdhb7Q8CDY9 Vmn1r43-201ENSMUST00000089418 1069 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
Pcdhb7Q8CDY9 Olfr73-201ENSMUST00000099838 942 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
Pcdhb7Q8CDY9 Gimd1-201ENSMUST00000163241 1413 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Pcdhb7Q8CDY9 Ralgps2-204ENSMUST00000172057 6863 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Pcdhb7Q8CDY9 Gm10538-201ENSMUST00000189499 1877 ntTSL 2 BASIC8.59□□□□□ -1.03
Pcdhb7Q8CDY9 Vwde-202ENSMUST00000203074 5626 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Pcdhb7Q8CDY9 A230085B16Rik-201ENSMUST00000209781 1856 ntBASIC8.59□□□□□ -1.03
Pcdhb7Q8CDY9 Ikbkg-202ENSMUST00000064407 4530 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
Pcdhb7Q8CDY9 AC138284.3-201ENSMUST00000217345 4663 ntBASIC8.59□□□□□ -1.03
Pcdhb7Q8CDY9 Napg-201ENSMUST00000025474 3562 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Pcdhb7Q8CDY9 Dynlt3-201ENSMUST00000033519 2176 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Pcdhb7Q8CDY9 Phlpp2-203ENSMUST00000179721 7846 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Pcdhb7Q8CDY9 Pcdh11x-201ENSMUST00000050239 4442 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
Pcdhb7Q8CDY9 Psg16-201ENSMUST00000071399 4421 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Pcdhb7Q8CDY9 Gm5120-201ENSMUST00000215231 2414 ntBASIC8.59□□□□□ -1.03
Pcdhb7Q8CDY9 Bcorl1-201ENSMUST00000037596 7360 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.04
Pcdhb7Q8CDY9 Mctp2-201ENSMUST00000079323 5802 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Pcdhb7Q8CDY9 Pax3-202ENSMUST00000087086 3863 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Pcdhb7Q8CDY9 Osbpl1a-202ENSMUST00000117361 2687 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Pcdhb7Q8CDY9 Gm6554-201ENSMUST00000220592 1912 ntBASIC8.58□□□□□ -1.04
Pcdhb7Q8CDY9 Slc38a1-202ENSMUST00000088454 7059 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Pcdhb7Q8CDY9 Greb1-212ENSMUST00000162112 8058 ntAPPRIS P3 TSL 5 BASIC8.58□□□□□ -1.04
Pcdhb7Q8CDY9 Rpgr-206ENSMUST00000115534 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Pcdhb7Q8CDY9 Olfr117-202ENSMUST00000213638 3183 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms