Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Gm36241-201ENSMUST00000201085 493 ntTSL 3 BASIC8.49□□□□□ -1.05
Ccdc38Q8CDN8 Gm19254-201ENSMUST00000204828 294 ntBASIC8.49□□□□□ -1.05
Ccdc38Q8CDN8 Gm45145-203ENSMUST00000208872 958 ntTSL 5 BASIC8.49□□□□□ -1.05
Ccdc38Q8CDN8 Gm45388-202ENSMUST00000211101 815 ntTSL 5 BASIC8.49□□□□□ -1.05
Ccdc38Q8CDN8 Rnf212-206ENSMUST00000212212 924 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
Ccdc38Q8CDN8 Gm29154-205ENSMUST00000213325 1112 ntTSL 5 BASIC8.49□□□□□ -1.05
Ccdc38Q8CDN8 Gm4977-201ENSMUST00000215709 1262 ntBASIC8.49□□□□□ -1.05
Ccdc38Q8CDN8 AC166078.1-201ENSMUST00000217211 584 ntTSL 2 BASIC8.49□□□□□ -1.05
Ccdc38Q8CDN8 Gm34574-202ENSMUST00000219433 1108 ntTSL 5 BASIC8.49□□□□□ -1.05
Ccdc38Q8CDN8 Llcfc1-201ENSMUST00000031900 741 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Ccdc38Q8CDN8 Iba57-202ENSMUST00000069631 864 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Ccdc38Q8CDN8 Olfr285-201ENSMUST00000079736 960 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
Ccdc38Q8CDN8 Nsun2-201ENSMUST00000022087 4164 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Ccdc38Q8CDN8 Cyfip1-202ENSMUST00000085255 4195 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Ccdc38Q8CDN8 Wdfy4-201ENSMUST00000061753 9681 ntAPPRIS P2 TSL 5 BASIC8.49□□□□□ -1.05
Ccdc38Q8CDN8 Osbpl3-202ENSMUST00000090019 4039 ntAPPRIS ALT1 TSL 5 BASIC8.49□□□□□ -1.05
Ccdc38Q8CDN8 Senp8-207ENSMUST00000217093 1663 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
Ccdc38Q8CDN8 4930518I15Rik-201ENSMUST00000099141 1331 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
Ccdc38Q8CDN8 Enpep-201ENSMUST00000029658 4181 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Ccdc38Q8CDN8 Gm44014-201ENSMUST00000205150 1509 ntBASIC8.49□□□□□ -1.05
Ccdc38Q8CDN8 Gatad2b-204ENSMUST00000199607 2418 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
Ccdc38Q8CDN8 Bbs12-201ENSMUST00000057975 2433 ntAPPRIS P1 TSL 2 BASIC8.49□□□□□ -1.05
Ccdc38Q8CDN8 Dock5-201ENSMUST00000039135 9988 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Ccdc38Q8CDN8 Adarb2-202ENSMUST00000123187 4002 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Ccdc38Q8CDN8 Cul5-202ENSMUST00000120122 5945 ntTSL 5 BASIC8.48□□□□□ -1.05
Ccdc38Q8CDN8 1520401A03Rik-204ENSMUST00000178006 3726 ntAPPRIS ALT2 TSL 2 BASIC8.48□□□□□ -1.05
Ccdc38Q8CDN8 Pgbd1-202ENSMUST00000122872 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Ccdc38Q8CDN8 Vmn1r44-208ENSMUST00000227456 2031 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
Ccdc38Q8CDN8 Taf1-206ENSMUST00000149274 5954 ntAPPRIS P2 TSL 5 BASIC8.48□□□□□ -1.05
Ccdc38Q8CDN8 Ighv11-2-201ENSMUST00000103468 461 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
Ccdc38Q8CDN8 Selenof-202ENSMUST00000106211 1178 ntTSL 3 BASIC8.48□□□□□ -1.05
Ccdc38Q8CDN8 Gm12034-201ENSMUST00000119032 399 ntBASIC8.48□□□□□ -1.05
Ccdc38Q8CDN8 Gm4918-201ENSMUST00000119420 1084 ntBASIC8.48□□□□□ -1.05
Ccdc38Q8CDN8 H3f3a-ps1-201ENSMUST00000119546 410 ntBASIC8.48□□□□□ -1.05
Ccdc38Q8CDN8 Gm13622-201ENSMUST00000120658 433 ntBASIC8.48□□□□□ -1.05
Ccdc38Q8CDN8 Gm11474-201ENSMUST00000120814 277 ntBASIC8.48□□□□□ -1.05
Ccdc38Q8CDN8 Gm14830-201ENSMUST00000121899 700 ntBASIC8.48□□□□□ -1.05
Ccdc38Q8CDN8 BC016548-201ENSMUST00000144657 640 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Ccdc38Q8CDN8 Acss2os-201ENSMUST00000148685 629 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Ccdc38Q8CDN8 Six3os1-213ENSMUST00000177487 537 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Ccdc38Q8CDN8 Gm14214-201ENSMUST00000184654 678 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
Ccdc38Q8CDN8 1700021A07Rik-202ENSMUST00000187763 485 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Ccdc38Q8CDN8 Gm38143-201ENSMUST00000191751 644 ntTSL 3 BASIC8.48□□□□□ -1.05
Ccdc38Q8CDN8 Gm38256-201ENSMUST00000192097 950 ntTSL 5 BASIC8.48□□□□□ -1.05
Ccdc38Q8CDN8 Gm38047-201ENSMUST00000193690 1133 ntBASIC8.48□□□□□ -1.05
Ccdc38Q8CDN8 Gm32842-201ENSMUST00000212653 738 ntBASIC8.48□□□□□ -1.05
Ccdc38Q8CDN8 4930550C14Rik-204ENSMUST00000217318 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Ccdc38Q8CDN8 4930579P08Rik-201ENSMUST00000218193 1227 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Ccdc38Q8CDN8 CT033781.3-201ENSMUST00000221886 504 ntTSL 2 BASIC8.48□□□□□ -1.05
Ccdc38Q8CDN8 Gm46323-201ENSMUST00000223136 628 ntTSL 5 BASIC8.48□□□□□ -1.05
Ccdc38Q8CDN8 AC099629.1-201ENSMUST00000226778 464 ntBASIC8.48□□□□□ -1.05
Ccdc38Q8CDN8 Glycam1-201ENSMUST00000023134 628 ntAPPRIS P2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Ccdc38Q8CDN8 Olfr417-201ENSMUST00000085862 930 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
Ccdc38Q8CDN8 Dmrtc1c2-202ENSMUST00000087899 717 ntAPPRIS P3 TSL 5 BASIC8.48□□□□□ -1.05
Ccdc38Q8CDN8 Mef2c-222ENSMUST00000199019 4441 ntTSL 5 BASIC8.48□□□□□ -1.05
Ccdc38Q8CDN8 6720489N17Rik-203ENSMUST00000223338 1457 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
Ccdc38Q8CDN8 Olfr1497-202ENSMUST00000217384 1672 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
Ccdc38Q8CDN8 Trmt5-201ENSMUST00000116420 2066 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Ccdc38Q8CDN8 Hyal5-202ENSMUST00000200968 2070 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Ccdc38Q8CDN8 Mapk1ip1l-201ENSMUST00000164235 4531 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Ccdc38Q8CDN8 Tssk1-201ENSMUST00000046937 3700 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
Ccdc38Q8CDN8 C87499-201ENSMUST00000053304 1901 ntAPPRIS P2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Ccdc38Q8CDN8 Gm44116-201ENSMUST00000204269 1525 ntBASIC8.48□□□□□ -1.05
Ccdc38Q8CDN8 Tnip3-201ENSMUST00000114236 3769 ntAPPRIS P2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Ccdc38Q8CDN8 Txlnb-201ENSMUST00000037964 4422 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Ccdc38Q8CDN8 Vmn1r37-205ENSMUST00000227923 1773 ntAPPRIS P2 BASIC8.48□□□□□ -1.05
Ccdc38Q8CDN8 Gm26831-201ENSMUST00000181458 1380 ntBASIC8.48□□□□□ -1.05
Ccdc38Q8CDN8 Slirp-204ENSMUST00000161023 2701 ntAPPRIS P2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Ccdc38Q8CDN8 Gm45061-201ENSMUST00000204395 2095 ntBASIC8.47□□□□□ -1.05
Ccdc38Q8CDN8 Gm6567-201ENSMUST00000205529 2095 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Ccdc38Q8CDN8 Stk26-202ENSMUST00000114887 3173 ntTSL 5 BASIC8.47□□□□□ -1.05
Ccdc38Q8CDN8 Dsg1c-201ENSMUST00000054128 4088 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Ccdc38Q8CDN8 Pecam1-204ENSMUST00000106796 3441 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Ccdc38Q8CDN8 Pcbp2-203ENSMUST00000108838 2775 ntAPPRIS ALT1 TSL 2 BASIC8.47□□□□□ -1.05
Ccdc38Q8CDN8 C630043F03Rik-201ENSMUST00000122923 2581 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Ccdc38Q8CDN8 Vmn2r-ps159-203ENSMUST00000189559 2560 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Ccdc38Q8CDN8 Rapgef5-201ENSMUST00000109691 6746 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Ccdc38Q8CDN8 Vtcn1-201ENSMUST00000054791 2622 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Ccdc38Q8CDN8 Cisd3-202ENSMUST00000107584 546 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Ccdc38Q8CDN8 Gm15154-201ENSMUST00000117590 366 ntBASIC8.47□□□□□ -1.05
Ccdc38Q8CDN8 Gm14414-201ENSMUST00000120833 573 ntBASIC8.47□□□□□ -1.05
Ccdc38Q8CDN8 Pogk-201ENSMUST00000127596 769 ntTSL 3 BASIC8.47□□□□□ -1.05
Ccdc38Q8CDN8 Banf2os-202ENSMUST00000145504 386 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Ccdc38Q8CDN8 Gm26408-201ENSMUST00000157672 127 ntBASIC8.47□□□□□ -1.05
Ccdc38Q8CDN8 Gm23497-201ENSMUST00000157738 130 ntBASIC8.47□□□□□ -1.05
Ccdc38Q8CDN8 Gm25265-201ENSMUST00000158520 347 ntBASIC8.47□□□□□ -1.05
Ccdc38Q8CDN8 Gm7162-201ENSMUST00000161205 1024 ntBASIC8.47□□□□□ -1.05
Ccdc38Q8CDN8 Gm6838-201ENSMUST00000172851 582 ntBASIC8.47□□□□□ -1.05
Ccdc38Q8CDN8 Gm9399-201ENSMUST00000175771 639 ntBASIC8.47□□□□□ -1.05
Ccdc38Q8CDN8 Gm8167-201ENSMUST00000183320 958 ntBASIC8.47□□□□□ -1.05
Ccdc38Q8CDN8 Gm26980-201ENSMUST00000183321 395 ntBASIC8.47□□□□□ -1.05
Ccdc38Q8CDN8 Gm28622-201ENSMUST00000189842 507 ntTSL 5 BASIC8.47□□□□□ -1.05
Ccdc38Q8CDN8 Gm5541-201ENSMUST00000193248 1113 ntBASIC8.47□□□□□ -1.05
Ccdc38Q8CDN8 Gm38135-201ENSMUST00000195068 502 ntBASIC8.47□□□□□ -1.05
Ccdc38Q8CDN8 Tmigd3-204ENSMUST00000198080 832 ntAPPRIS P2 TSL 5 BASIC8.47□□□□□ -1.05
Ccdc38Q8CDN8 Gm44285-201ENSMUST00000203557 940 ntBASIC8.47□□□□□ -1.05
Ccdc38Q8CDN8 Gm44427-201ENSMUST00000204123 456 ntTSL 3 BASIC8.47□□□□□ -1.05
Ccdc38Q8CDN8 Gm6909-201ENSMUST00000209825 989 ntBASIC8.47□□□□□ -1.05
Ccdc38Q8CDN8 Gm33096-201ENSMUST00000210189 493 ntBASIC8.47□□□□□ -1.05
Ccdc38Q8CDN8 Gm19228-201ENSMUST00000214030 717 ntBASIC8.47□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms