Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Gm4141-201ENSMUST00000174364 921 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Ccdc87Q8CDL9 Gm4201-201ENSMUST00000174775 921 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Ccdc87Q8CDL9 Gm24824-201ENSMUST00000175097 78 ntBASIC8.11□□□□□ -1.11
Ccdc87Q8CDL9 Gm9399-201ENSMUST00000175771 639 ntBASIC8.11□□□□□ -1.11
Ccdc87Q8CDL9 Mir6919-201ENSMUST00000185146 62 ntBASIC8.11□□□□□ -1.11
Ccdc87Q8CDL9 1600019K03Rik-201ENSMUST00000187829 477 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Ccdc87Q8CDL9 Gm29362-201ENSMUST00000187898 133 ntBASIC8.11□□□□□ -1.11
Ccdc87Q8CDL9 Gm29517-201ENSMUST00000190744 351 ntBASIC8.11□□□□□ -1.11
Ccdc87Q8CDL9 Gm35025-202ENSMUST00000193114 455 ntTSL 3 BASIC8.11□□□□□ -1.11
Ccdc87Q8CDL9 Gm43377-201ENSMUST00000201640 455 ntBASIC8.11□□□□□ -1.11
Ccdc87Q8CDL9 4930513D17Rik-203ENSMUST00000202800 1159 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Ccdc87Q8CDL9 Gm30771-201ENSMUST00000205683 737 ntTSL 3 BASIC8.11□□□□□ -1.11
Ccdc87Q8CDL9 AC132433.1-201ENSMUST00000221553 1101 ntBASIC8.11□□□□□ -1.11
Ccdc87Q8CDL9 AC131710.2-201ENSMUST00000226773 683 ntBASIC8.11□□□□□ -1.11
Ccdc87Q8CDL9 AC147096.1-201ENSMUST00000227648 352 ntBASIC8.11□□□□□ -1.11
Ccdc87Q8CDL9 Gm5564-201ENSMUST00000034916 967 ntBASIC8.11□□□□□ -1.11
Ccdc87Q8CDL9 Mrpl42-201ENSMUST00000075829 666 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ccdc87Q8CDL9 Gm24919-201ENSMUST00000083020 106 ntBASIC8.11□□□□□ -1.11
Ccdc87Q8CDL9 Slc22a26-201ENSMUST00000065634 2007 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ccdc87Q8CDL9 Patj-203ENSMUST00000102792 3755 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Ccdc87Q8CDL9 Fbxo16-204ENSMUST00000226005 3700 ntAPPRIS ALT2 BASIC8.11□□□□□ -1.11
Ccdc87Q8CDL9 E330013P04Rik-203ENSMUST00000190698 2996 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Ccdc87Q8CDL9 Slirp-204ENSMUST00000161023 2701 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ccdc87Q8CDL9 Selp-205ENSMUST00000162746 3438 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ccdc87Q8CDL9 Mdc1-201ENSMUST00000082337 7335 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Ccdc87Q8CDL9 Kcnmb2-203ENSMUST00000178668 2917 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Ccdc87Q8CDL9 Gm21671-201ENSMUST00000162387 2421 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Ccdc87Q8CDL9 Gm14373-201ENSMUST00000122467 2158 ntBASIC8.11□□□□□ -1.11
Ccdc87Q8CDL9 Gm6819-201ENSMUST00000185325 1891 ntBASIC8.11□□□□□ -1.11
Ccdc87Q8CDL9 Tssk1-201ENSMUST00000046937 3700 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Ccdc87Q8CDL9 Fam60a-211ENSMUST00000204435 2785 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Ccdc87Q8CDL9 AC132384.7-201ENSMUST00000220198 1391 ntBASIC8.1□□□□□ -1.11
Ccdc87Q8CDL9 Gm44797-201ENSMUST00000208780 1837 ntBASIC8.1□□□□□ -1.11
Ccdc87Q8CDL9 Zfp106-201ENSMUST00000055241 9085 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Ccdc87Q8CDL9 Odf2-204ENSMUST00000113756 3826 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Ccdc87Q8CDL9 Gm6509-202ENSMUST00000201552 1582 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Ccdc87Q8CDL9 Cyp2e1-202ENSMUST00000209253 1582 ntTSL 5 BASIC8.1□□□□□ -1.11
Ccdc87Q8CDL9 Nadk-201ENSMUST00000030939 2946 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Ccdc87Q8CDL9 Synj2-206ENSMUST00000115787 4013 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Ccdc87Q8CDL9 C130093G08Rik-201ENSMUST00000202489 2226 ntBASIC8.1□□□□□ -1.11
Ccdc87Q8CDL9 Homer1-205ENSMUST00000109492 1533 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Ccdc87Q8CDL9 Zfp870-202ENSMUST00000228075 5222 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Ccdc87Q8CDL9 Carf-206ENSMUST00000180952 2157 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
Ccdc87Q8CDL9 Ulk4-209ENSMUST00000171923 4103 ntAPPRIS P2 TSL 5 BASIC8.1□□□□□ -1.11
Ccdc87Q8CDL9 D030045P18Rik-203ENSMUST00000214947 1938 ntTSL 5 BASIC8.1□□□□□ -1.11
Ccdc87Q8CDL9 Rgs8-204ENSMUST00000111814 678 ntTSL 3 BASIC8.1□□□□□ -1.11
Ccdc87Q8CDL9 Gm12024-201ENSMUST00000118819 1253 ntBASIC8.1□□□□□ -1.11
Ccdc87Q8CDL9 Gm12687-201ENSMUST00000119752 706 ntBASIC8.1□□□□□ -1.11
Ccdc87Q8CDL9 Lypd8-201ENSMUST00000013787 1093 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Ccdc87Q8CDL9 Gm13068-202ENSMUST00000146250 876 ntTSL 3 BASIC8.1□□□□□ -1.11
Ccdc87Q8CDL9 Gm13012-202ENSMUST00000155349 849 ntTSL 2 BASIC8.1□□□□□ -1.11
Ccdc87Q8CDL9 Gm12718-202ENSMUST00000156144 660 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Ccdc87Q8CDL9 Fcor-201ENSMUST00000159364 392 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Ccdc87Q8CDL9 Gm9149-201ENSMUST00000182724 1007 ntBASIC8.1□□□□□ -1.11
Ccdc87Q8CDL9 Gm6931-201ENSMUST00000183103 371 ntBASIC8.1□□□□□ -1.11
Ccdc87Q8CDL9 4930533D04Rik-201ENSMUST00000185478 788 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Ccdc87Q8CDL9 Gm8480-201ENSMUST00000190350 698 ntBASIC8.1□□□□□ -1.11
Ccdc87Q8CDL9 Gm44508-201ENSMUST00000206943 1157 ntBASIC8.1□□□□□ -1.11
Ccdc87Q8CDL9 Gm7972-201ENSMUST00000208434 1137 ntBASIC8.1□□□□□ -1.11
Ccdc87Q8CDL9 E130119H09Rik-201ENSMUST00000223176 978 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Ccdc87Q8CDL9 Rpl7a-ps1-201ENSMUST00000223350 793 ntBASIC8.1□□□□□ -1.11
Ccdc87Q8CDL9 Gm7086-202ENSMUST00000228849 506 ntBASIC8.1□□□□□ -1.11
Ccdc87Q8CDL9 CT009550.2-201ENSMUST00000228851 399 ntBASIC8.1□□□□□ -1.11
Ccdc87Q8CDL9 Tmem216-201ENSMUST00000025569 1101 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Ccdc87Q8CDL9 1700024P04Rik-201ENSMUST00000054425 481 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Ccdc87Q8CDL9 Gm8882-201ENSMUST00000080849 1240 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Ccdc87Q8CDL9 Olfr417-201ENSMUST00000085862 930 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Ccdc87Q8CDL9 Prl6a1-201ENSMUST00000091679 1093 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
Ccdc87Q8CDL9 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Ccdc87Q8CDL9 Defa30-201ENSMUST00000098898 398 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Ccdc87Q8CDL9 Olfr1226-201ENSMUST00000099790 933 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Ccdc87Q8CDL9 Cep85l-204ENSMUST00000220376 2339 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
Ccdc87Q8CDL9 Cops2-203ENSMUST00000110463 3392 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Ccdc87Q8CDL9 Vmn2r-ps96-201ENSMUST00000221218 2545 ntBASIC8.1□□□□□ -1.11
Ccdc87Q8CDL9 Gphn-202ENSMUST00000110388 3300 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Ccdc87Q8CDL9 Acox3-210ENSMUST00000202266 3501 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
Ccdc87Q8CDL9 St7-203ENSMUST00000053148 2288 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Ccdc87Q8CDL9 Olfr1426-207ENSMUST00000220005 2466 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Ccdc87Q8CDL9 Gm7337-202ENSMUST00000181439 2655 ntBASIC8.1□□□□□ -1.11
Ccdc87Q8CDL9 Gm15624-201ENSMUST00000145420 1405 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Ccdc87Q8CDL9 Gm42514-201ENSMUST00000196636 1832 ntBASIC8.1□□□□□ -1.11
Ccdc87Q8CDL9 Gc-201ENSMUST00000049209 1801 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Ccdc87Q8CDL9 Pomk-201ENSMUST00000061850 3613 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Ccdc87Q8CDL9 Cast-207ENSMUST00000222588 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Ccdc87Q8CDL9 2810414N06Rik-201ENSMUST00000186444 1381 ntTSL 2 BASIC8.1□□□□□ -1.11
Ccdc87Q8CDL9 A430110L20Rik-202ENSMUST00000181680 2513 ntBASIC8.09□□□□□ -1.11
Ccdc87Q8CDL9 Afap1l2-203ENSMUST00000122359 3667 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
Ccdc87Q8CDL9 Fbxw10-205ENSMUST00000176577 3254 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Ccdc87Q8CDL9 Etv1-210ENSMUST00000161980 1939 ntTSL 5 BASIC8.09□□□□□ -1.11
Ccdc87Q8CDL9 A530064D06Rik-202ENSMUST00000053612 1900 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
Ccdc87Q8CDL9 Olfr701-201ENSMUST00000075414 3063 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Ccdc87Q8CDL9 Olfr324-202ENSMUST00000214990 3624 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
Ccdc87Q8CDL9 Gm18194-202ENSMUST00000210952 3442 ntBASIC8.09□□□□□ -1.11
Ccdc87Q8CDL9 Gm9575-201ENSMUST00000122140 1339 ntBASIC8.09□□□□□ -1.11
Ccdc87Q8CDL9 E230015B07Rik-202ENSMUST00000159884 2822 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Ccdc87Q8CDL9 Zfp846-202ENSMUST00000115557 12974 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Ccdc87Q8CDL9 Rp1-201ENSMUST00000027032 6869 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Ccdc87Q8CDL9 Plb1-205ENSMUST00000202201 3539 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Ccdc87Q8CDL9 4930532G15Rik-202ENSMUST00000195314 1457 ntBASIC8.09□□□□□ -1.11
Ccdc87Q8CDL9 Sox6-205ENSMUST00000169129 5122 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 90.2 ms