Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Lrrc51-210ENSMUST00000163903 939 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Traf1P39428 Svs3a-201ENSMUST00000017147 1191 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
Traf1P39428 Gm24923-201ENSMUST00000178201 88 ntBASIC8.89□□□□□ -0.99
Traf1P39428 Gm4308-201ENSMUST00000179735 914 ntBASIC8.89□□□□□ -0.99
Traf1P39428 Gm27542-201ENSMUST00000184184 256 ntBASIC8.89□□□□□ -0.99
Traf1P39428 Gm4301-201ENSMUST00000186197 914 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Traf1P39428 Gm29355-201ENSMUST00000188178 697 ntBASIC8.89□□□□□ -0.99
Traf1P39428 Gm28953-201ENSMUST00000188336 697 ntBASIC8.89□□□□□ -0.99
Traf1P39428 Gm4312-201ENSMUST00000190264 914 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Traf1P39428 Gm20788-201ENSMUST00000190538 697 ntBASIC8.89□□□□□ -0.99
Traf1P39428 1110002O04Rik-201ENSMUST00000194261 566 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Traf1P39428 Gm37395-201ENSMUST00000194721 697 ntBASIC8.89□□□□□ -0.99
Traf1P39428 Gm37440-202ENSMUST00000195572 1227 ntTSL 5 BASIC8.89□□□□□ -0.99
Traf1P39428 Olfr316-201ENSMUST00000203731 1011 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Traf1P39428 A930014E10Rik-201ENSMUST00000205115 546 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Traf1P39428 Gm44979-201ENSMUST00000206218 287 ntBASIC8.89□□□□□ -0.99
Traf1P39428 Gm34533-201ENSMUST00000209249 552 ntTSL 5 BASIC8.89□□□□□ -0.99
Traf1P39428 Olfr674-ps1-201ENSMUST00000209383 946 ntBASIC8.89□□□□□ -0.99
Traf1P39428 Gm8804-201ENSMUST00000212292 798 ntBASIC8.89□□□□□ -0.99
Traf1P39428 AC132590.1-201ENSMUST00000224374 1164 ntBASIC8.89□□□□□ -0.99
Traf1P39428 Olfr1445-201ENSMUST00000049624 1001 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Traf1P39428 Olfr672-201ENSMUST00000050599 939 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Traf1P39428 Gm10123-201ENSMUST00000075723 490 ntBASIC8.89□□□□□ -0.99
Traf1P39428 Trim66-202ENSMUST00000106739 9250 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Traf1P39428 Olfr1320-202ENSMUST00000214273 1982 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Traf1P39428 Naip1-202ENSMUST00000221727 1968 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Traf1P39428 AC158686.1-201ENSMUST00000218068 2332 ntBASIC8.89□□□□□ -0.99
Traf1P39428 1700029M20Rik-203ENSMUST00000153347 2963 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Traf1P39428 A330076C08Rik-201ENSMUST00000220765 5020 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Traf1P39428 Kbtbd3-201ENSMUST00000049648 2231 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Traf1P39428 Ifit1bl2-202ENSMUST00000112463 3217 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Traf1P39428 Gm884-202ENSMUST00000167262 4576 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Traf1P39428 Kif14-203ENSMUST00000189413 8943 ntAPPRIS P2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Traf1P39428 Ank3-208ENSMUST00000182029 3825 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Traf1P39428 Nasp-203ENSMUST00000081182 1461 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Traf1P39428 Olfr1-201ENSMUST00000120303 3433 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Traf1P39428 Zfp473-202ENSMUST00000118162 3091 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Traf1P39428 Gm37206-201ENSMUST00000195512 3069 ntBASIC8.89□□□□□ -0.99
Traf1P39428 Musk-207ENSMUST00000177951 3352 ntTSL 5 BASIC8.89□□□□□ -0.99
Traf1P39428 Musk-204ENSMUST00000098059 3352 ntTSL 5 BASIC8.89□□□□□ -0.99
Traf1P39428 Smco3-201ENSMUST00000068293 2056 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Traf1P39428 Heatr5a-201ENSMUST00000040583 7763 ntAPPRIS P2 TSL 5 BASIC8.88□□□□□ -0.99
Traf1P39428 Myh10-202ENSMUST00000092984 7759 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Traf1P39428 4930448K20Rik-202ENSMUST00000182072 1433 ntBASIC8.88□□□□□ -0.99
Traf1P39428 Rab8b-201ENSMUST00000041139 4733 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Traf1P39428 Olfr846-202ENSMUST00000214810 4342 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Traf1P39428 Gm29500-201ENSMUST00000185992 1344 ntTSL 5 BASIC8.88□□□□□ -0.99
Traf1P39428 Olfr467-202ENSMUST00000208563 1852 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Traf1P39428 Olfr467-203ENSMUST00000214253 1855 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Traf1P39428 Cep170-212ENSMUST00000194727 6784 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
Traf1P39428 Gm28497-201ENSMUST00000189646 3029 ntBASIC8.88□□□□□ -0.99
Traf1P39428 Garnl3-202ENSMUST00000102810 3578 ntAPPRIS P2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Traf1P39428 Trim75-201ENSMUST00000095295 3273 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Traf1P39428 Amd-ps4-201ENSMUST00000118392 1003 ntBASIC8.88□□□□□ -0.99
Traf1P39428 Gm13828-201ENSMUST00000122278 363 ntBASIC8.88□□□□□ -0.99
Traf1P39428 Babam2-205ENSMUST00000131995 1220 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Traf1P39428 Gm15124-201ENSMUST00000142053 953 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Traf1P39428 Smarcal1-207ENSMUST00000152225 2994 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Traf1P39428 Gm13427-201ENSMUST00000154296 794 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Traf1P39428 Gm23533-201ENSMUST00000157540 245 ntBASIC8.88□□□□□ -0.99
Traf1P39428 Gm17047-201ENSMUST00000167709 430 ntBASIC8.88□□□□□ -0.99
Traf1P39428 Vmn2r-ps81-201ENSMUST00000172519 838 ntBASIC8.88□□□□□ -0.99
Traf1P39428 Gm29562-201ENSMUST00000190113 904 ntBASIC8.88□□□□□ -0.99
Traf1P39428 Gm4780-201ENSMUST00000213206 1242 ntBASIC8.88□□□□□ -0.99
Traf1P39428 Cryab-203ENSMUST00000214962 846 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Traf1P39428 Gm19428-202ENSMUST00000220573 1038 ntTSL 5 BASIC8.88□□□□□ -0.99
Traf1P39428 AC118249.1-201ENSMUST00000224822 608 ntBASIC8.88□□□□□ -0.99
Traf1P39428 AC139209.2-201ENSMUST00000227680 1208 ntBASIC8.88□□□□□ -0.99
Traf1P39428 Ppbp-201ENSMUST00000031319 1083 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Traf1P39428 Plp1-201ENSMUST00000033800 4699 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Traf1P39428 Olfr125-201ENSMUST00000050255 1118 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
Traf1P39428 Pan2-206ENSMUST00000219721 4316 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Traf1P39428 Asb14-201ENSMUST00000090337 2062 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Traf1P39428 Siae-202ENSMUST00000213126 2306 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
Traf1P39428 Gm8428-201ENSMUST00000159919 1784 ntBASIC8.88□□□□□ -0.99
Traf1P39428 Zfp626-202ENSMUST00000205671 5329 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Traf1P39428 Adam2-201ENSMUST00000022618 2551 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Traf1P39428 Gm7134-201ENSMUST00000122296 2406 ntBASIC8.88□□□□□ -0.99
Traf1P39428 Mef2c-222ENSMUST00000199019 4441 ntTSL 5 BASIC8.87□□□□□ -0.99
Traf1P39428 Nin-202ENSMUST00000085314 9675 ntAPPRIS P4 TSL 1 (best) BASIC8.87□□□□□ -0.99
Traf1P39428 Ctdspl2-203ENSMUST00000110574 1616 ntAPPRIS P3 TSL 5 BASIC8.87□□□□□ -0.99
Traf1P39428 Gm42595-201ENSMUST00000196771 1607 ntBASIC8.87□□□□□ -0.99
Traf1P39428 Cts3-202ENSMUST00000223815 1367 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Traf1P39428 BC106179-201ENSMUST00000055369 4128 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Traf1P39428 Oas1e-203ENSMUST00000201172 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Traf1P39428 Gm43430-201ENSMUST00000196513 3897 ntBASIC8.87□□□□□ -0.99
Traf1P39428 Eif4e2-202ENSMUST00000076362 3394 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Traf1P39428 Igkv4-51-201ENSMUST00000103345 394 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Traf1P39428 Mir669e-201ENSMUST00000117003 119 ntBASIC8.87□□□□□ -0.99
Traf1P39428 Gm5228-201ENSMUST00000117186 357 ntBASIC8.87□□□□□ -0.99
Traf1P39428 Gm16044-201ENSMUST00000118475 450 ntBASIC8.87□□□□□ -0.99
Traf1P39428 Rps25-ps1-201ENSMUST00000119876 378 ntBASIC8.87□□□□□ -0.99
Traf1P39428 Gm13038-201ENSMUST00000119886 459 ntBASIC8.87□□□□□ -0.99
Traf1P39428 Gm5406-201ENSMUST00000120054 766 ntBASIC8.87□□□□□ -0.99
Traf1P39428 Gm14110-201ENSMUST00000127688 758 ntTSL 5 BASIC8.87□□□□□ -0.99
Traf1P39428 Gm15792-201ENSMUST00000137099 769 ntTSL 3 BASIC8.87□□□□□ -0.99
Traf1P39428 1700001G01Rik-204ENSMUST00000153022 928 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Traf1P39428 Mir7005-201ENSMUST00000185089 69 ntBASIC8.87□□□□□ -0.99
Traf1P39428 1810022K09Rik-202ENSMUST00000185384 435 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
Traf1P39428 Gm4785-201ENSMUST00000191025 751 ntBASIC8.87□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms