Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm25607-201ENSMUST00000104020 127 ntBASIC6.11□□□□□ -1.43
Hmgb3O54879 Atp5h-203ENSMUST00000106537 682 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Hmgb3O54879 Cep112-204ENSMUST00000106724 678 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Hmgb3O54879 Gm12024-201ENSMUST00000118819 1253 ntBASIC6.11□□□□□ -1.43
Hmgb3O54879 Gm14826-201ENSMUST00000121284 901 ntBASIC6.11□□□□□ -1.43
Hmgb3O54879 Gm2214-201ENSMUST00000121333 330 ntBASIC6.11□□□□□ -1.43
Hmgb3O54879 Pfn2-204ENSMUST00000122210 810 ntTSL 3 BASIC6.11□□□□□ -1.43
Hmgb3O54879 Gm13071-201ENSMUST00000122237 376 ntBASIC6.11□□□□□ -1.43
Hmgb3O54879 4930555O08Rik-201ENSMUST00000122821 668 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Hmgb3O54879 Crem-218ENSMUST00000139537 807 ntTSL 2 BASIC6.11□□□□□ -1.43
Hmgb3O54879 Gm26357-201ENSMUST00000158218 115 ntBASIC6.11□□□□□ -1.43
Hmgb3O54879 Gm17228-201ENSMUST00000165006 491 ntBASIC6.11□□□□□ -1.43
Hmgb3O54879 Gm3275-201ENSMUST00000169145 487 ntBASIC6.11□□□□□ -1.43
Hmgb3O54879 Olfr270-202ENSMUST00000172257 939 ntAPPRIS P2 BASIC6.11□□□□□ -1.43
Hmgb3O54879 Gm9286-201ENSMUST00000173586 508 ntBASIC6.11□□□□□ -1.43
Hmgb3O54879 Mir5623-201ENSMUST00000176631 70 ntBASIC6.11□□□□□ -1.43
Hmgb3O54879 Gm3002-202ENSMUST00000178256 444 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Hmgb3O54879 Gm5698-201ENSMUST00000178317 724 ntBASIC6.11□□□□□ -1.43
Hmgb3O54879 Gm2974-202ENSMUST00000180184 447 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Hmgb3O54879 Mir6973a-201ENSMUST00000183646 78 ntBASIC6.11□□□□□ -1.43
Hmgb3O54879 5830468F06Rik-201ENSMUST00000184288 1104 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Hmgb3O54879 Gm27224-201ENSMUST00000184749 564 ntTSL 3 BASIC6.11□□□□□ -1.43
Hmgb3O54879 4930533D04Rik-201ENSMUST00000185478 788 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Hmgb3O54879 Ly6e-208ENSMUST00000188042 714 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
Hmgb3O54879 Gm37450-201ENSMUST00000195218 170 ntBASIC6.11□□□□□ -1.43
Hmgb3O54879 Gm44159-201ENSMUST00000204065 442 ntBASIC6.11□□□□□ -1.43
Hmgb3O54879 Gm44833-201ENSMUST00000208368 331 ntBASIC6.11□□□□□ -1.43
Hmgb3O54879 Gm2734-201ENSMUST00000208561 743 ntBASIC6.11□□□□□ -1.43
Hmgb3O54879 Smarca2-238ENSMUST00000208589 1054 ntTSL 5 BASIC6.11□□□□□ -1.43
Hmgb3O54879 AC124585.1-201ENSMUST00000213334 953 ntTSL 5 BASIC6.11□□□□□ -1.43
Hmgb3O54879 Gm10054-201ENSMUST00000223362 431 ntBASIC6.11□□□□□ -1.43
Hmgb3O54879 AC116596.2-201ENSMUST00000226642 526 ntBASIC6.11□□□□□ -1.43
Hmgb3O54879 n-R5s74-201ENSMUST00000082654 116 ntBASIC6.11□□□□□ -1.43
Hmgb3O54879 Snora65-201ENSMUST00000083190 130 ntBASIC6.11□□□□□ -1.43
Hmgb3O54879 Bcl2a1d-201ENSMUST00000098486 863 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Hmgb3O54879 Serpina12-201ENSMUST00000043915 3690 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Hmgb3O54879 Chd9-201ENSMUST00000048665 12008 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
Hmgb3O54879 Nsun7-201ENSMUST00000031109 2345 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Hmgb3O54879 Etnppl-201ENSMUST00000072271 4468 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Hmgb3O54879 1110002J07Rik-201ENSMUST00000181710 2229 ntTSL 5 BASIC6.11□□□□□ -1.43
Hmgb3O54879 AC161884.1-201ENSMUST00000225436 2174 ntBASIC6.11□□□□□ -1.43
Hmgb3O54879 Vmn1r184-202ENSMUST00000227230 7999 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Hmgb3O54879 Rab1a-206ENSMUST00000163483 2657 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Hmgb3O54879 Gm6011-201ENSMUST00000211736 1796 ntBASIC6.11□□□□□ -1.43
Hmgb3O54879 Gm38014-201ENSMUST00000193349 2612 ntBASIC6.11□□□□□ -1.43
Hmgb3O54879 Pcdh15-237ENSMUST00000193361 7881 ntAPPRIS P3 TSL 5 BASIC6.11□□□□□ -1.43
Hmgb3O54879 Mef2c-227ENSMUST00000199432 3498 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Hmgb3O54879 Dach2-203ENSMUST00000113379 2512 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Hmgb3O54879 Gm28515-201ENSMUST00000189823 2530 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Hmgb3O54879 4933408N05Rik-201ENSMUST00000139864 1584 ntTSL 5 BASIC6.1□□□□□ -1.43
Hmgb3O54879 Ptgfr-202ENSMUST00000106126 1535 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Hmgb3O54879 Gm43429-201ENSMUST00000197889 2251 ntBASIC6.1□□□□□ -1.43
Hmgb3O54879 Cdh2-202ENSMUST00000115850 3785 ntTSL 5 BASIC6.1□□□□□ -1.43
Hmgb3O54879 Zfa-ps-201ENSMUST00000180526 2231 ntBASIC6.1□□□□□ -1.43
Hmgb3O54879 Kmt2d-201ENSMUST00000023741 19823 ntAPPRIS P2 TSL 5 BASIC6.1□□□□□ -1.43
Hmgb3O54879 Serpina1d-201ENSMUST00000078869 1394 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Hmgb3O54879 Gm28651-202ENSMUST00000227968 2693 ntBASIC6.1□□□□□ -1.43
Hmgb3O54879 Elk3-204ENSMUST00000151153 1336 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Hmgb3O54879 AC112680.1-201ENSMUST00000215435 1349 ntBASIC6.1□□□□□ -1.43
Hmgb3O54879 1700011H14Rik-201ENSMUST00000022398 1349 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Hmgb3O54879 5031434C07Rik-202ENSMUST00000188014 3244 ntBASIC6.1□□□□□ -1.43
Hmgb3O54879 Gm23659-201ENSMUST00000102245 110 ntBASIC6.1□□□□□ -1.43
Hmgb3O54879 Trav12-1-201ENSMUST00000103650 344 ntAPPRIS ALT2 BASIC6.1□□□□□ -1.43
Hmgb3O54879 Gm13495-201ENSMUST00000121156 537 ntBASIC6.1□□□□□ -1.43
Hmgb3O54879 Gm15006-201ENSMUST00000121419 1122 ntBASIC6.1□□□□□ -1.43
Hmgb3O54879 Gm14380-201ENSMUST00000122298 431 ntBASIC6.1□□□□□ -1.43
Hmgb3O54879 Bloodlinc-201ENSMUST00000126237 679 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Hmgb3O54879 Gm12648-201ENSMUST00000126270 656 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Hmgb3O54879 Gm15543-201ENSMUST00000141307 361 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Hmgb3O54879 Gm11827-201ENSMUST00000142297 1257 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Hmgb3O54879 Gm14437-201ENSMUST00000152284 360 ntTSL 5 BASIC6.1□□□□□ -1.43
Hmgb3O54879 Gm23598-201ENSMUST00000157262 144 ntBASIC6.1□□□□□ -1.43
Hmgb3O54879 Gm23555-201ENSMUST00000157815 135 ntBASIC6.1□□□□□ -1.43
Hmgb3O54879 5730435O14Rik-202ENSMUST00000170047 617 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Hmgb3O54879 Gm8877-201ENSMUST00000172657 655 ntBASIC6.1□□□□□ -1.43
Hmgb3O54879 Gm23413-201ENSMUST00000175521 125 ntBASIC6.1□□□□□ -1.43
Hmgb3O54879 Gm5973-201ENSMUST00000178542 496 ntBASIC6.1□□□□□ -1.43
Hmgb3O54879 Trav5d-4-201ENSMUST00000179701 343 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Hmgb3O54879 Gm24466-201ENSMUST00000179978 109 ntBASIC6.1□□□□□ -1.43
Hmgb3O54879 Trav5n-4-201ENSMUST00000179997 343 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Hmgb3O54879 Gm26652-201ENSMUST00000180592 373 ntTSL 3 BASIC6.1□□□□□ -1.43
Hmgb3O54879 Gm24362-201ENSMUST00000183220 416 ntBASIC6.1□□□□□ -1.43
Hmgb3O54879 Gm28126-201ENSMUST00000185286 356 ntTSL 5 BASIC6.1□□□□□ -1.43
Hmgb3O54879 Gm29291-201ENSMUST00000186055 686 ntTSL 3 BASIC6.1□□□□□ -1.43
Hmgb3O54879 Gm29453-201ENSMUST00000186428 1279 ntBASIC6.1□□□□□ -1.43
Hmgb3O54879 Gm28212-201ENSMUST00000187114 356 ntTSL 5 BASIC6.1□□□□□ -1.43
Hmgb3O54879 Gm29568-201ENSMUST00000187884 356 ntTSL 5 BASIC6.1□□□□□ -1.43
Hmgb3O54879 Gm29080-201ENSMUST00000188565 356 ntTSL 5 BASIC6.1□□□□□ -1.43
Hmgb3O54879 Gm28944-201ENSMUST00000188946 356 ntTSL 5 BASIC6.1□□□□□ -1.43
Hmgb3O54879 Gm28908-201ENSMUST00000189002 356 ntTSL 5 BASIC6.1□□□□□ -1.43
Hmgb3O54879 Gm29078-201ENSMUST00000190611 356 ntTSL 5 BASIC6.1□□□□□ -1.43
Hmgb3O54879 Gm38247-201ENSMUST00000194675 433 ntBASIC6.1□□□□□ -1.43
Hmgb3O54879 Gm42667-201ENSMUST00000196132 234 ntBASIC6.1□□□□□ -1.43
Hmgb3O54879 Gm43777-201ENSMUST00000197269 376 ntTSL 3 BASIC6.1□□□□□ -1.43
Hmgb3O54879 Gm3774-201ENSMUST00000209773 435 ntBASIC6.1□□□□□ -1.43
Hmgb3O54879 Gm45274-201ENSMUST00000209938 647 ntTSL 3 BASIC6.1□□□□□ -1.43
Hmgb3O54879 Gm32743-201ENSMUST00000214196 594 ntTSL 3 BASIC6.1□□□□□ -1.43
Hmgb3O54879 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Hmgb3O54879 CT030175.1-201ENSMUST00000220822 408 ntBASIC6.1□□□□□ -1.43
Hmgb3O54879 Gm5194-201ENSMUST00000221457 742 ntBASIC6.1□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 86 ms