Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Gm25760-201ENSMUST00000103989 132 ntBASIC8.62□□□□□ -1.03
B020004C17RikJ3QP07 Tardbp-205ENSMUST00000105700 923 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
B020004C17RikJ3QP07 Gm13030-201ENSMUST00000105805 655 ntAPPRIS P1 TSL 3 BASIC8.62□□□□□ -1.03
B020004C17RikJ3QP07 Rpl31-ps10-201ENSMUST00000116034 378 ntBASIC8.62□□□□□ -1.03
B020004C17RikJ3QP07 Skint1-201ENSMUST00000117379 875 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
B020004C17RikJ3QP07 Gm4919-201ENSMUST00000117825 604 ntBASIC8.62□□□□□ -1.03
B020004C17RikJ3QP07 Gm9311-201ENSMUST00000118042 1269 ntBASIC8.62□□□□□ -1.03
B020004C17RikJ3QP07 Amd-ps4-201ENSMUST00000118392 1003 ntBASIC8.62□□□□□ -1.03
B020004C17RikJ3QP07 Rpl31-ps11-201ENSMUST00000119898 377 ntBASIC8.62□□□□□ -1.03
B020004C17RikJ3QP07 Rpl31-ps12-201ENSMUST00000119957 375 ntBASIC8.62□□□□□ -1.03
B020004C17RikJ3QP07 Gm16102-201ENSMUST00000160955 420 ntBASIC8.62□□□□□ -1.03
B020004C17RikJ3QP07 Skint1-203ENSMUST00000161389 960 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
B020004C17RikJ3QP07 Gm42421-201ENSMUST00000172367 719 ntAPPRIS P1 TSL 3 BASIC8.62□□□□□ -1.03
B020004C17RikJ3QP07 Rpl31-ps8-201ENSMUST00000181935 378 ntBASIC8.62□□□□□ -1.03
B020004C17RikJ3QP07 Gm18501-201ENSMUST00000185363 664 ntBASIC8.62□□□□□ -1.03
B020004C17RikJ3QP07 Rpl31-206ENSMUST00000195123 356 ntTSL 3 BASIC8.62□□□□□ -1.03
B020004C17RikJ3QP07 Gm17833-201ENSMUST00000197629 1065 ntBASIC8.62□□□□□ -1.03
B020004C17RikJ3QP07 Gm42767-201ENSMUST00000198583 632 ntBASIC8.62□□□□□ -1.03
B020004C17RikJ3QP07 Gm42963-201ENSMUST00000202943 1217 ntBASIC8.62□□□□□ -1.03
B020004C17RikJ3QP07 Gm45864-201ENSMUST00000211965 1019 ntTSL 2 BASIC8.62□□□□□ -1.03
B020004C17RikJ3QP07 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC8.62□□□□□ -1.03
B020004C17RikJ3QP07 AC121793.1-201ENSMUST00000214211 633 ntTSL 5 BASIC8.62□□□□□ -1.03
B020004C17RikJ3QP07 AC151904.5-201ENSMUST00000218975 549 ntBASIC8.62□□□□□ -1.03
B020004C17RikJ3QP07 4930520K02Rik-201ENSMUST00000219522 388 ntTSL 3 BASIC8.62□□□□□ -1.03
B020004C17RikJ3QP07 AC105167.1-201ENSMUST00000219966 253 ntTSL 5 BASIC8.62□□□□□ -1.03
B020004C17RikJ3QP07 AC116589.2-201ENSMUST00000220469 478 ntTSL 3 BASIC8.62□□□□□ -1.03
B020004C17RikJ3QP07 AC159188.3-201ENSMUST00000224199 880 ntBASIC8.62□□□□□ -1.03
B020004C17RikJ3QP07 Rpl31-ps4-201ENSMUST00000079114 390 ntBASIC8.62□□□□□ -1.03
B020004C17RikJ3QP07 Rpl31-ps9-201ENSMUST00000086596 378 ntBASIC8.62□□□□□ -1.03
B020004C17RikJ3QP07 Cenpo-205ENSMUST00000140975 4348 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
B020004C17RikJ3QP07 Cd44-205ENSMUST00000111191 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
B020004C17RikJ3QP07 Ap3s2-201ENSMUST00000075657 5813 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
B020004C17RikJ3QP07 Luzp4-202ENSMUST00000163338 2025 ntAPPRIS P2 TSL 5 BASIC8.62□□□□□ -1.03
B020004C17RikJ3QP07 Gm31181-201ENSMUST00000217731 2283 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
B020004C17RikJ3QP07 Prpf4b-201ENSMUST00000077853 7844 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
B020004C17RikJ3QP07 Wdpcp-201ENSMUST00000020568 2792 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
B020004C17RikJ3QP07 Med1-203ENSMUST00000107545 8024 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
B020004C17RikJ3QP07 Sgsh-202ENSMUST00000100172 4223 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
B020004C17RikJ3QP07 Nudt13-201ENSMUST00000022343 2494 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
B020004C17RikJ3QP07 Gm4673-201ENSMUST00000181395 3660 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
B020004C17RikJ3QP07 Dclre1b-202ENSMUST00000063502 4113 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
B020004C17RikJ3QP07 Ube4a-204ENSMUST00000138559 3374 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
B020004C17RikJ3QP07 Cyp2j11-201ENSMUST00000015368 1917 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
B020004C17RikJ3QP07 Anapc15-210ENSMUST00000144207 3103 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
B020004C17RikJ3QP07 Med23-201ENSMUST00000020159 4798 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
B020004C17RikJ3QP07 Actr10-201ENSMUST00000021479 4022 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
B020004C17RikJ3QP07 4930444A19Rik-201ENSMUST00000188243 2117 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
B020004C17RikJ3QP07 Ccr4-201ENSMUST00000054414 2805 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
B020004C17RikJ3QP07 Supt20-203ENSMUST00000197502 2751 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
B020004C17RikJ3QP07 Nlrp3-201ENSMUST00000079476 3933 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
B020004C17RikJ3QP07 Slc43a2-201ENSMUST00000042561 6891 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
B020004C17RikJ3QP07 Krr1-203ENSMUST00000163048 5023 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
B020004C17RikJ3QP07 Gm33280-201ENSMUST00000193983 4340 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
B020004C17RikJ3QP07 Akap10-201ENSMUST00000058173 2015 ntTSL 2 BASIC8.61□□□□□ -1.03
B020004C17RikJ3QP07 Ccdc187-202ENSMUST00000217256 9411 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
B020004C17RikJ3QP07 Sap130-201ENSMUST00000025109 4015 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
B020004C17RikJ3QP07 Nrxn3-210ENSMUST00000167887 3303 ntTSL 5 BASIC8.61□□□□□ -1.03
B020004C17RikJ3QP07 Gm26816-201ENSMUST00000180679 2448 ntTSL 5 BASIC8.61□□□□□ -1.03
B020004C17RikJ3QP07 Meis2-205ENSMUST00000110907 3718 ntAPPRIS ALT1 TSL 1 (best) BASIC8.61□□□□□ -1.03
B020004C17RikJ3QP07 Ubn2-205ENSMUST00000160583 14644 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
B020004C17RikJ3QP07 Entpd5-201ENSMUST00000021662 4931 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
B020004C17RikJ3QP07 Ighv14-1-201ENSMUST00000103463 351 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
B020004C17RikJ3QP07 Spata48-202ENSMUST00000109678 753 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
B020004C17RikJ3QP07 Gm15217-201ENSMUST00000111826 733 ntAPPRIS P5 TSL 2 BASIC8.61□□□□□ -1.03
B020004C17RikJ3QP07 Gm15913-201ENSMUST00000118492 331 ntBASIC8.61□□□□□ -1.03
B020004C17RikJ3QP07 Gm15316-201ENSMUST00000121082 421 ntBASIC8.61□□□□□ -1.03
B020004C17RikJ3QP07 Gm15788-201ENSMUST00000130123 613 ntTSL 3 BASIC8.61□□□□□ -1.03
B020004C17RikJ3QP07 Gm13982-201ENSMUST00000138372 755 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
B020004C17RikJ3QP07 Gm13857-202ENSMUST00000141091 617 ntTSL 3 BASIC8.61□□□□□ -1.03
B020004C17RikJ3QP07 Gm15392-201ENSMUST00000152863 778 ntTSL 3 BASIC8.61□□□□□ -1.03
B020004C17RikJ3QP07 Gm21970-201ENSMUST00000160764 884 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
B020004C17RikJ3QP07 Gm20396-201ENSMUST00000173358 745 ntBASIC8.61□□□□□ -1.03
B020004C17RikJ3QP07 Ighv2-9-1-201ENSMUST00000180013 369 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
B020004C17RikJ3QP07 Gm26851-201ENSMUST00000181867 918 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
B020004C17RikJ3QP07 Gm17750-201ENSMUST00000182477 529 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
B020004C17RikJ3QP07 Gm29066-201ENSMUST00000188502 452 ntTSL 3 BASIC8.61□□□□□ -1.03
B020004C17RikJ3QP07 Lax1-202ENSMUST00000189524 628 ntTSL 2 BASIC8.61□□□□□ -1.03
B020004C17RikJ3QP07 Gm29477-201ENSMUST00000189860 499 ntTSL 5 BASIC8.61□□□□□ -1.03
B020004C17RikJ3QP07 Gm16754-202ENSMUST00000193429 508 ntTSL 3 BASIC8.61□□□□□ -1.03
B020004C17RikJ3QP07 D13Ertd608e-202ENSMUST00000195797 704 ntAPPRIS P5 TSL 1 (best) BASIC8.61□□□□□ -1.03
B020004C17RikJ3QP07 Gm8182-201ENSMUST00000197863 769 ntBASIC8.61□□□□□ -1.03
B020004C17RikJ3QP07 Gm31711-201ENSMUST00000220687 196 ntBASIC8.61□□□□□ -1.03
B020004C17RikJ3QP07 CT025639.2-201ENSMUST00000224440 1220 ntBASIC8.61□□□□□ -1.03
B020004C17RikJ3QP07 Olfr683-201ENSMUST00000061284 960 ntBASIC8.61□□□□□ -1.03
B020004C17RikJ3QP07 Chn2-202ENSMUST00000067741 2983 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
B020004C17RikJ3QP07 Gm23054-201ENSMUST00000082804 162 ntBASIC8.61□□□□□ -1.03
B020004C17RikJ3QP07 Gm22504-201ENSMUST00000082963 139 ntBASIC8.61□□□□□ -1.03
B020004C17RikJ3QP07 Uggt1-201ENSMUST00000046875 9033 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
B020004C17RikJ3QP07 Cntnap2-205ENSMUST00000199100 6279 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
B020004C17RikJ3QP07 Tmem43-201ENSMUST00000032183 2903 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
B020004C17RikJ3QP07 Daam1-202ENSMUST00000221317 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
B020004C17RikJ3QP07 C78859-201ENSMUST00000212800 5943 ntBASIC8.61□□□□□ -1.03
B020004C17RikJ3QP07 Cphx1-204ENSMUST00000184016 1649 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
B020004C17RikJ3QP07 Gm37611-201ENSMUST00000195250 2028 ntBASIC8.61□□□□□ -1.03
B020004C17RikJ3QP07 Phc3-203ENSMUST00000099163 2808 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
B020004C17RikJ3QP07 Gm37924-201ENSMUST00000195470 3647 ntBASIC8.61□□□□□ -1.03
B020004C17RikJ3QP07 Lca5-201ENSMUST00000034791 4160 ntAPPRIS P4 TSL 1 (best) BASIC8.61□□□□□ -1.03
B020004C17RikJ3QP07 Mei1-203ENSMUST00000188048 3197 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
B020004C17RikJ3QP07 Cacna2d4-205ENSMUST00000186622 3710 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
B020004C17RikJ3QP07 Cs-201ENSMUST00000005826 2926 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms