Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Olfr1497-202ENSMUST00000217384 1672 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Cstf3Q99LI7 Adgrf1-201ENSMUST00000047399 3853 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Cstf3Q99LI7 Ighv11-2-201ENSMUST00000103468 461 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Cstf3Q99LI7 Gm24334-201ENSMUST00000104210 128 ntBASIC7.36□□□□□ -1.23
Cstf3Q99LI7 Babam2-203ENSMUST00000114507 1143 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Cstf3Q99LI7 Gm41-201ENSMUST00000116183 1023 ntBASIC7.36□□□□□ -1.23
Cstf3Q99LI7 Gm15154-201ENSMUST00000117590 366 ntBASIC7.36□□□□□ -1.23
Cstf3Q99LI7 Gm12034-201ENSMUST00000119032 399 ntBASIC7.36□□□□□ -1.23
Cstf3Q99LI7 Gm13622-201ENSMUST00000120658 433 ntBASIC7.36□□□□□ -1.23
Cstf3Q99LI7 Gm12499-201ENSMUST00000121961 546 ntBASIC7.36□□□□□ -1.23
Cstf3Q99LI7 Pogk-201ENSMUST00000127596 769 ntTSL 3 BASIC7.36□□□□□ -1.23
Cstf3Q99LI7 Gm26351-201ENSMUST00000157532 232 ntBASIC7.36□□□□□ -1.23
Cstf3Q99LI7 Six3os1-213ENSMUST00000177487 537 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Cstf3Q99LI7 Gm8167-201ENSMUST00000183320 958 ntBASIC7.36□□□□□ -1.23
Cstf3Q99LI7 Gm29477-201ENSMUST00000189860 499 ntTSL 5 BASIC7.36□□□□□ -1.23
Cstf3Q99LI7 Tmigd3-204ENSMUST00000198080 832 ntAPPRIS P2 TSL 5 BASIC7.36□□□□□ -1.23
Cstf3Q99LI7 Gm42808-201ENSMUST00000198212 285 ntTSL 5 BASIC7.36□□□□□ -1.23
Cstf3Q99LI7 Gm7565-201ENSMUST00000203611 623 ntBASIC7.36□□□□□ -1.23
Cstf3Q99LI7 Rnf212-206ENSMUST00000212212 924 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Cstf3Q99LI7 Cenpn-205ENSMUST00000212775 837 ntTSL 3 BASIC7.36□□□□□ -1.23
Cstf3Q99LI7 Gm4977-201ENSMUST00000215709 1262 ntBASIC7.36□□□□□ -1.23
Cstf3Q99LI7 Gm40646-202ENSMUST00000218796 793 ntTSL 5 BASIC7.36□□□□□ -1.23
Cstf3Q99LI7 Gm18629-201ENSMUST00000222496 884 ntBASIC7.36□□□□□ -1.23
Cstf3Q99LI7 AC099629.1-201ENSMUST00000226778 464 ntBASIC7.36□□□□□ -1.23
Cstf3Q99LI7 Olfr466-201ENSMUST00000058907 927 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Cstf3Q99LI7 Ifna4-201ENSMUST00000094973 561 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Cstf3Q99LI7 Olfr122-202ENSMUST00000172582 1620 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
Cstf3Q99LI7 Slc51a-201ENSMUST00000042042 1600 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Cstf3Q99LI7 Zfp59-201ENSMUST00000108331 1962 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
Cstf3Q99LI7 Gm10706-201ENSMUST00000128327 1960 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Cstf3Q99LI7 Tmem232-201ENSMUST00000062161 2665 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Cstf3Q99LI7 Gm38218-201ENSMUST00000193555 4689 ntBASIC7.36□□□□□ -1.23
Cstf3Q99LI7 Btbd3-201ENSMUST00000075410 4940 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Cstf3Q99LI7 Gabrb2-205ENSMUST00000192403 1539 ntAPPRIS ALT1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Cstf3Q99LI7 Olfr180-203ENSMUST00000206168 1518 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
Cstf3Q99LI7 Zfp207-203ENSMUST00000108216 2152 ntTSL 2 BASIC7.36□□□□□ -1.23
Cstf3Q99LI7 Pnlip-201ENSMUST00000057270 1485 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Cstf3Q99LI7 Gm15759-201ENSMUST00000161126 3723 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Cstf3Q99LI7 Gm6493-201ENSMUST00000159889 1786 ntBASIC7.36□□□□□ -1.23
Cstf3Q99LI7 Gm26569-201ENSMUST00000181968 1789 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Cstf3Q99LI7 Msantd4-201ENSMUST00000047173 2731 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Cstf3Q99LI7 Vmn1r44-206ENSMUST00000226760 2070 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Cstf3Q99LI7 9630028H03Rik-201ENSMUST00000129868 2364 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Cstf3Q99LI7 4930480K23Rik-201ENSMUST00000180465 3326 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Cstf3Q99LI7 Fbxw10-203ENSMUST00000150989 3267 ntAPPRIS P3 TSL 5 BASIC7.35□□□□□ -1.23
Cstf3Q99LI7 Rab39b-201ENSMUST00000033545 3401 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Cstf3Q99LI7 Strbp-202ENSMUST00000072186 3144 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Cstf3Q99LI7 C87499-201ENSMUST00000053304 1901 ntAPPRIS P2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Cstf3Q99LI7 Pnliprp1-201ENSMUST00000048644 1619 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Cstf3Q99LI7 Camk2d-205ENSMUST00000106401 3059 ntTSL 5 BASIC7.35□□□□□ -1.23
Cstf3Q99LI7 Gm44916-201ENSMUST00000208664 2194 ntBASIC7.35□□□□□ -1.23
Cstf3Q99LI7 Brd8-202ENSMUST00000097626 3005 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Cstf3Q99LI7 Ermard-204ENSMUST00000097395 1593 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
Cstf3Q99LI7 Ighv1-59-201ENSMUST00000103530 348 ntAPPRIS ALT2 BASIC7.35□□□□□ -1.23
Cstf3Q99LI7 Gm11907-201ENSMUST00000118918 1007 ntBASIC7.35□□□□□ -1.23
Cstf3Q99LI7 Gm11739-201ENSMUST00000125269 723 ntTSL 3 BASIC7.35□□□□□ -1.23
Cstf3Q99LI7 Acss2os-201ENSMUST00000148685 629 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Cstf3Q99LI7 Gm23958-201ENSMUST00000157207 105 ntBASIC7.35□□□□□ -1.23
Cstf3Q99LI7 Gm25265-201ENSMUST00000158520 347 ntBASIC7.35□□□□□ -1.23
Cstf3Q99LI7 Gm9399-201ENSMUST00000175771 639 ntBASIC7.35□□□□□ -1.23
Cstf3Q99LI7 Gm6556-201ENSMUST00000181118 362 ntTSL 5 BASIC7.35□□□□□ -1.23
Cstf3Q99LI7 Gm26980-201ENSMUST00000183321 395 ntBASIC7.35□□□□□ -1.23
Cstf3Q99LI7 Cd247-209ENSMUST00000187313 2957 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Cstf3Q99LI7 1700027F09Rik-201ENSMUST00000189767 767 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Cstf3Q99LI7 Slamf6-204ENSMUST00000194561 984 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Cstf3Q99LI7 Olfr737-ps1-201ENSMUST00000205382 283 ntBASIC7.35□□□□□ -1.23
Cstf3Q99LI7 Gm18972-201ENSMUST00000218873 630 ntBASIC7.35□□□□□ -1.23
Cstf3Q99LI7 CT572999.1-201ENSMUST00000220315 1260 ntBASIC7.35□□□□□ -1.23
Cstf3Q99LI7 Gm2915-201ENSMUST00000222565 787 ntBASIC7.35□□□□□ -1.23
Cstf3Q99LI7 Gm46323-201ENSMUST00000223136 628 ntTSL 5 BASIC7.35□□□□□ -1.23
Cstf3Q99LI7 AC154461.5-201ENSMUST00000225429 774 ntBASIC7.35□□□□□ -1.23
Cstf3Q99LI7 Cytl1-201ENSMUST00000073554 974 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Cstf3Q99LI7 Bcl2l11-203ENSMUST00000103210 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Cstf3Q99LI7 Glra4-201ENSMUST00000018739 1831 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Cstf3Q99LI7 Snrpb2-201ENSMUST00000008477 2061 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Cstf3Q99LI7 Tmcc1-203ENSMUST00000172510 2612 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Cstf3Q99LI7 Wdr76-204ENSMUST00000110603 2341 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
Cstf3Q99LI7 Gm45904-201ENSMUST00000213082 2330 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Cstf3Q99LI7 Sp1-201ENSMUST00000001326 7754 ntAPPRIS P2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Cstf3Q99LI7 Stra6l-203ENSMUST00000107783 3669 ntAPPRIS P3 TSL 5 BASIC7.35□□□□□ -1.23
Cstf3Q99LI7 Ksr2-202ENSMUST00000180430 13125 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Cstf3Q99LI7 Vmn1r44-208ENSMUST00000227456 2031 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Cstf3Q99LI7 Asph-209ENSMUST00000108335 2514 ntTSL 5 BASIC7.35□□□□□ -1.23
Cstf3Q99LI7 Efcab7-201ENSMUST00000097959 1713 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Cstf3Q99LI7 Mllt3-202ENSMUST00000126353 1956 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Cstf3Q99LI7 Sema3a-202ENSMUST00000095012 4085 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Cstf3Q99LI7 Prkacb-201ENSMUST00000005164 4001 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Cstf3Q99LI7 4933404K08Rik-201ENSMUST00000156977 1434 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Cstf3Q99LI7 Gimd1-201ENSMUST00000163241 1413 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Cstf3Q99LI7 Zfp964-201ENSMUST00000169125 1416 ntTSL 3 BASIC7.35□□□□□ -1.23
Cstf3Q99LI7 CT010514.1-201ENSMUST00000214088 2969 ntBASIC7.35□□□□□ -1.23
Cstf3Q99LI7 Gm15318-202ENSMUST00000146320 1661 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Cstf3Q99LI7 Crtam-202ENSMUST00000180384 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Cstf3Q99LI7 Gm37274-201ENSMUST00000192167 1682 ntBASIC7.35□□□□□ -1.23
Cstf3Q99LI7 Gm36283-203ENSMUST00000220211 3732 ntTSL 5 BASIC7.35□□□□□ -1.23
Cstf3Q99LI7 Olfr1555-ps1-202ENSMUST00000219261 2918 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
Cstf3Q99LI7 Olfr1173-202ENSMUST00000216887 5363 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Cstf3Q99LI7 Nol8-205ENSMUST00000222197 4368 ntAPPRIS P2 TSL 1 (best) BASIC7.34□□□□□ -1.23
Cstf3Q99LI7 Smc1b-201ENSMUST00000023068 4047 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Cstf3Q99LI7 Zfp661-201ENSMUST00000077422 2765 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms