Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm8882-201ENSMUST00000080849 1240 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Clrn1Q8K445 Rps15a-204ENSMUST00000131374 5179 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Clrn1Q8K445 Gm38339-201ENSMUST00000195479 1829 ntBASIC7.33□□□□□ -1.24
Clrn1Q8K445 Gm16427-201ENSMUST00000179091 1449 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
Clrn1Q8K445 Folh1-201ENSMUST00000001824 3125 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
Clrn1Q8K445 AC154347.1-201ENSMUST00000221358 3105 ntBASIC7.33□□□□□ -1.24
Clrn1Q8K445 Olfr1384-202ENSMUST00000213776 4437 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Clrn1Q8K445 Acp1-201ENSMUST00000062740 3066 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
Clrn1Q8K445 Musk-208ENSMUST00000179951 3376 ntTSL 5 BASIC7.33□□□□□ -1.24
Clrn1Q8K445 Gm17552-201ENSMUST00000181211 3877 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Clrn1Q8K445 Retreg1-203ENSMUST00000226438 2783 ntBASIC7.32□□□□□ -1.24
Clrn1Q8K445 Anxa9-201ENSMUST00000015846 1851 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Clrn1Q8K445 Gm4451-201ENSMUST00000186000 1891 ntBASIC7.32□□□□□ -1.24
Clrn1Q8K445 Olfr1199-203ENSMUST00000131038 2557 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
Clrn1Q8K445 Mlh3-201ENSMUST00000019378 5463 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Clrn1Q8K445 Pnlip-201ENSMUST00000057270 1485 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Clrn1Q8K445 Mak-201ENSMUST00000021792 3385 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
Clrn1Q8K445 Nip7-201ENSMUST00000034392 3036 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Clrn1Q8K445 Gm38331-201ENSMUST00000195719 2671 ntBASIC7.32□□□□□ -1.24
Clrn1Q8K445 Gm5725-201ENSMUST00000105195 924 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Clrn1Q8K445 Pex3-203ENSMUST00000105541 1072 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Clrn1Q8K445 Npm1-204ENSMUST00000109354 1157 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Clrn1Q8K445 Rnf170-203ENSMUST00000110575 966 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Clrn1Q8K445 Tfpi-207ENSMUST00000111722 1232 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
Clrn1Q8K445 Gm7785-201ENSMUST00000117121 892 ntBASIC7.32□□□□□ -1.24
Clrn1Q8K445 Gm12401-201ENSMUST00000118435 228 ntBASIC7.32□□□□□ -1.24
Clrn1Q8K445 Gm12993-201ENSMUST00000119900 479 ntBASIC7.32□□□□□ -1.24
Clrn1Q8K445 Gm13506-201ENSMUST00000120391 1083 ntBASIC7.32□□□□□ -1.24
Clrn1Q8K445 Rpl9-ps2-201ENSMUST00000120821 577 ntBASIC7.32□□□□□ -1.24
Clrn1Q8K445 Gm13068-202ENSMUST00000146250 876 ntTSL 3 BASIC7.32□□□□□ -1.24
Clrn1Q8K445 Gm8653-201ENSMUST00000163096 924 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Clrn1Q8K445 Vmn1r129-201ENSMUST00000165961 924 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Clrn1Q8K445 Vmn1r117-201ENSMUST00000166937 924 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Clrn1Q8K445 Cd180-202ENSMUST00000167144 430 ntTSL 2 BASIC7.32□□□□□ -1.24
Clrn1Q8K445 1700071M16Rik-202ENSMUST00000167672 767 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Clrn1Q8K445 Gm8720-201ENSMUST00000168392 924 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Clrn1Q8K445 Gm6164-201ENSMUST00000169774 924 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Clrn1Q8K445 Commd3-212ENSMUST00000171845 938 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Clrn1Q8K445 Trav9n-3-201ENSMUST00000177705 575 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Clrn1Q8K445 Trav9d-3-201ENSMUST00000178252 575 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Clrn1Q8K445 Gm6100-201ENSMUST00000180253 403 ntBASIC7.32□□□□□ -1.24
Clrn1Q8K445 Gm26832-201ENSMUST00000181456 1282 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Clrn1Q8K445 Gm28335-201ENSMUST00000186204 696 ntBASIC7.32□□□□□ -1.24
Clrn1Q8K445 Gm28558-201ENSMUST00000187373 696 ntBASIC7.32□□□□□ -1.24
Clrn1Q8K445 Plet1-202ENSMUST00000188047 739 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Clrn1Q8K445 Gm28734-201ENSMUST00000188104 696 ntBASIC7.32□□□□□ -1.24
Clrn1Q8K445 Gm28968-201ENSMUST00000190413 696 ntBASIC7.32□□□□□ -1.24
Clrn1Q8K445 4930440C22Rik-202ENSMUST00000190754 512 ntTSL 3 BASIC7.32□□□□□ -1.24
Clrn1Q8K445 Gm28926-201ENSMUST00000191063 680 ntBASIC7.32□□□□□ -1.24
Clrn1Q8K445 Gm38229-201ENSMUST00000191931 696 ntBASIC7.32□□□□□ -1.24
Clrn1Q8K445 Gm6140-201ENSMUST00000192494 966 ntBASIC7.32□□□□□ -1.24
Clrn1Q8K445 4930540E01Rik-201ENSMUST00000192569 1146 ntBASIC7.32□□□□□ -1.24
Clrn1Q8K445 Gm37502-201ENSMUST00000192981 356 ntTSL 2 BASIC7.32□□□□□ -1.24
Clrn1Q8K445 Gm38121-201ENSMUST00000193213 696 ntBASIC7.32□□□□□ -1.24
Clrn1Q8K445 Gm37991-201ENSMUST00000194297 696 ntBASIC7.32□□□□□ -1.24
Clrn1Q8K445 Gm38035-201ENSMUST00000194427 696 ntBASIC7.32□□□□□ -1.24
Clrn1Q8K445 Gm38350-201ENSMUST00000194789 696 ntBASIC7.32□□□□□ -1.24
Clrn1Q8K445 Gm9517-201ENSMUST00000195021 874 ntBASIC7.32□□□□□ -1.24
Clrn1Q8K445 Gm42431-201ENSMUST00000196880 323 ntBASIC7.32□□□□□ -1.24
Clrn1Q8K445 Vmn2r-ps26-201ENSMUST00000202039 2111 ntBASIC7.32□□□□□ -1.24
Clrn1Q8K445 Gm44038-201ENSMUST00000203952 889 ntBASIC7.32□□□□□ -1.24
Clrn1Q8K445 Gm44232-201ENSMUST00000204537 225 ntBASIC7.32□□□□□ -1.24
Clrn1Q8K445 9530078K11Rik-201ENSMUST00000208883 694 ntBASIC7.32□□□□□ -1.24
Clrn1Q8K445 Gm18192-201ENSMUST00000210174 941 ntBASIC7.32□□□□□ -1.24
Clrn1Q8K445 Gm8575-201ENSMUST00000210262 521 ntBASIC7.32□□□□□ -1.24
Clrn1Q8K445 Rnf212-206ENSMUST00000212212 924 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Clrn1Q8K445 Rps25-205ENSMUST00000216867 577 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Clrn1Q8K445 Gm9118-201ENSMUST00000219246 754 ntBASIC7.32□□□□□ -1.24
Clrn1Q8K445 AC153370.1-201ENSMUST00000220296 635 ntTSL 5 BASIC7.32□□□□□ -1.24
Clrn1Q8K445 CT030170.6-202ENSMUST00000223186 544 ntBASIC7.32□□□□□ -1.24
Clrn1Q8K445 AC157212.1-201ENSMUST00000228398 1075 ntBASIC7.32□□□□□ -1.24
Clrn1Q8K445 Gpihbp1-201ENSMUST00000023243 825 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Clrn1Q8K445 4930415O20Rik-201ENSMUST00000023728 558 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Clrn1Q8K445 Asb12-201ENSMUST00000033549 1258 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Clrn1Q8K445 1700024P04Rik-201ENSMUST00000054425 481 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Clrn1Q8K445 Vmn1r47-201ENSMUST00000074881 933 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Clrn1Q8K445 Olfr401-201ENSMUST00000079827 948 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Clrn1Q8K445 mt-Nd1-201ENSMUST00000082392 957 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Clrn1Q8K445 Gm23058-201ENSMUST00000093703 107 ntBASIC7.32□□□□□ -1.24
Clrn1Q8K445 Ifna4-201ENSMUST00000094973 561 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Clrn1Q8K445 Adcy10-202ENSMUST00000111439 5193 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
Clrn1Q8K445 Vmn2r30-201ENSMUST00000072475 3616 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Clrn1Q8K445 Rtel1-201ENSMUST00000048608 4135 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Clrn1Q8K445 Gm16429-201ENSMUST00000179824 1446 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Clrn1Q8K445 Cast-207ENSMUST00000222588 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Clrn1Q8K445 Dclre1b-204ENSMUST00000106834 3705 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Clrn1Q8K445 Gm37968-201ENSMUST00000195131 3201 ntBASIC7.32□□□□□ -1.24
Clrn1Q8K445 Nol8-205ENSMUST00000222197 4368 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Clrn1Q8K445 4933431K23Rik-204ENSMUST00000209273 2857 ntTSL 5 BASIC7.32□□□□□ -1.24
Clrn1Q8K445 Gm33035-201ENSMUST00000219854 1718 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Clrn1Q8K445 Srek1ip1-201ENSMUST00000022230 2365 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Clrn1Q8K445 Ska2-201ENSMUST00000020794 3037 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Clrn1Q8K445 Cnr1-202ENSMUST00000084736 5761 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
Clrn1Q8K445 Gm7647-201ENSMUST00000200996 1389 ntBASIC7.32□□□□□ -1.24
Clrn1Q8K445 Gtdc1-201ENSMUST00000049051 2197 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Clrn1Q8K445 Cfl2-201ENSMUST00000078124 2940 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Clrn1Q8K445 Smc1b-201ENSMUST00000023068 4047 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Clrn1Q8K445 Ociad1-203ENSMUST00000166823 3354 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Clrn1Q8K445 Slc7a2-204ENSMUST00000118432 3681 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Clrn1Q8K445 Sec22a-201ENSMUST00000043521 3992 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms