Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Stat1-205ENSMUST00000186574 2834 ntAPPRIS ALT1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Pcdhb7Q8CDY9 Rreb1-210ENSMUST00000149745 4320 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Pcdhb7Q8CDY9 Nrxn3-202ENSMUST00000110130 3654 ntTSL 2 BASIC8.61□□□□□ -1.03
Pcdhb7Q8CDY9 Lrrc49-202ENSMUST00000065603 3017 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Pcdhb7Q8CDY9 Ankfn1-202ENSMUST00000128717 2391 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Pcdhb7Q8CDY9 Vmn1r181-202ENSMUST00000226843 4496 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Pcdhb7Q8CDY9 Hbq1b-201ENSMUST00000101387 562 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Pcdhb7Q8CDY9 Cenpx-204ENSMUST00000106155 700 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Pcdhb7Q8CDY9 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Pcdhb7Q8CDY9 Zfp616-203ENSMUST00000116546 531 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Pcdhb7Q8CDY9 Tcea1-ps1-201ENSMUST00000117942 904 ntBASIC8.61□□□□□ -1.03
Pcdhb7Q8CDY9 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Pcdhb7Q8CDY9 Gm12819-201ENSMUST00000122223 629 ntBASIC8.61□□□□□ -1.03
Pcdhb7Q8CDY9 Gm13071-201ENSMUST00000122237 376 ntBASIC8.61□□□□□ -1.03
Pcdhb7Q8CDY9 Kcnab3os-201ENSMUST00000136196 566 ntTSL 3 BASIC8.61□□□□□ -1.03
Pcdhb7Q8CDY9 Gm28845-201ENSMUST00000144760 733 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Pcdhb7Q8CDY9 Gm12171-201ENSMUST00000150895 1257 ntTSL 5 BASIC8.61□□□□□ -1.03
Pcdhb7Q8CDY9 Gm24724-201ENSMUST00000158230 107 ntBASIC8.61□□□□□ -1.03
Pcdhb7Q8CDY9 Polr3g-204ENSMUST00000161920 733 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Pcdhb7Q8CDY9 Scgb1b28-ps-201ENSMUST00000163647 290 ntBASIC8.61□□□□□ -1.03
Pcdhb7Q8CDY9 Gm17228-201ENSMUST00000165006 491 ntBASIC8.61□□□□□ -1.03
Pcdhb7Q8CDY9 Guk1-205ENSMUST00000170895 743 ntTSL 5 BASIC8.61□□□□□ -1.03
Pcdhb7Q8CDY9 Gm20492-201ENSMUST00000172591 286 ntTSL 3 BASIC8.61□□□□□ -1.03
Pcdhb7Q8CDY9 Gm20694-201ENSMUST00000176943 404 ntBASIC8.61□□□□□ -1.03
Pcdhb7Q8CDY9 Gm19200-201ENSMUST00000182579 1001 ntBASIC8.61□□□□□ -1.03
Pcdhb7Q8CDY9 Nuf2-203ENSMUST00000192248 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Pcdhb7Q8CDY9 Gm37920-201ENSMUST00000192952 749 ntBASIC8.61□□□□□ -1.03
Pcdhb7Q8CDY9 Gm37710-201ENSMUST00000193501 1274 ntBASIC8.61□□□□□ -1.03
Pcdhb7Q8CDY9 Gm38301-201ENSMUST00000195573 543 ntBASIC8.61□□□□□ -1.03
Pcdhb7Q8CDY9 Gm44033-201ENSMUST00000203699 695 ntBASIC8.61□□□□□ -1.03
Pcdhb7Q8CDY9 Gm44159-201ENSMUST00000204065 442 ntBASIC8.61□□□□□ -1.03
Pcdhb7Q8CDY9 Gm44790-201ENSMUST00000204137 798 ntAPPRIS P1 TSL 3 BASIC8.61□□□□□ -1.03
Pcdhb7Q8CDY9 Gm18840-201ENSMUST00000204553 506 ntBASIC8.61□□□□□ -1.03
Pcdhb7Q8CDY9 Clec2f-202ENSMUST00000204981 657 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Pcdhb7Q8CDY9 4933432K03Rik-202ENSMUST00000206244 765 ntTSL 3 BASIC8.61□□□□□ -1.03
Pcdhb7Q8CDY9 AC162893.1-201ENSMUST00000207732 1085 ntBASIC8.61□□□□□ -1.03
Pcdhb7Q8CDY9 Gm45658-201ENSMUST00000209197 580 ntBASIC8.61□□□□□ -1.03
Pcdhb7Q8CDY9 Ctla2b-201ENSMUST00000021884 842 ntAPPRIS P4 TSL 1 (best) BASIC8.61□□□□□ -1.03
Pcdhb7Q8CDY9 AC154450.1-201ENSMUST00000220911 485 ntBASIC8.61□□□□□ -1.03
Pcdhb7Q8CDY9 AC130823.2-201ENSMUST00000226169 290 ntBASIC8.61□□□□□ -1.03
Pcdhb7Q8CDY9 AC113031.6-202ENSMUST00000228468 1145 ntBASIC8.61□□□□□ -1.03
Pcdhb7Q8CDY9 Olfr410-201ENSMUST00000052254 948 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Pcdhb7Q8CDY9 Olfr729-201ENSMUST00000061020 972 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Pcdhb7Q8CDY9 Gm10134-201ENSMUST00000074761 381 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Pcdhb7Q8CDY9 Gm11567-201ENSMUST00000078442 1043 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Pcdhb7Q8CDY9 Klk1b1-201ENSMUST00000078835 867 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Pcdhb7Q8CDY9 Scgb2b27-201ENSMUST00000085620 512 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
Pcdhb7Q8CDY9 Trps1-206ENSMUST00000184458 5293 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Pcdhb7Q8CDY9 Abr-201ENSMUST00000065028 4444 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Pcdhb7Q8CDY9 Gm26874-201ENSMUST00000181959 1817 ntTSL 5 BASIC8.61□□□□□ -1.03
Pcdhb7Q8CDY9 D630039A03Rik-201ENSMUST00000063816 2830 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Pcdhb7Q8CDY9 A830036E02Rik-204ENSMUST00000139095 3413 ntTSL 2 BASIC8.61□□□□□ -1.03
Pcdhb7Q8CDY9 Srp72-201ENSMUST00000101087 3625 ntAPPRIS P2 TSL 2 BASIC8.61□□□□□ -1.03
Pcdhb7Q8CDY9 Zkscan5-202ENSMUST00000085671 3794 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
Pcdhb7Q8CDY9 BC025920-201ENSMUST00000099442 2785 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Pcdhb7Q8CDY9 Slc17a1-202ENSMUST00000110413 1965 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Pcdhb7Q8CDY9 AC147250.1-201ENSMUST00000224781 1364 ntBASIC8.61□□□□□ -1.03
Pcdhb7Q8CDY9 Gpr50-201ENSMUST00000070449 3069 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Pcdhb7Q8CDY9 Ano4-210ENSMUST00000182790 4018 ntAPPRIS ALT1 TSL 5 BASIC8.6□□□□□ -1.03
Pcdhb7Q8CDY9 Gm37739-201ENSMUST00000191742 1505 ntTSL 5 BASIC8.6□□□□□ -1.03
Pcdhb7Q8CDY9 Gm38003-201ENSMUST00000191968 1504 ntTSL 5 BASIC8.6□□□□□ -1.03
Pcdhb7Q8CDY9 Gm28055-202ENSMUST00000189576 1301 ntTSL 3 BASIC8.6□□□□□ -1.03
Pcdhb7Q8CDY9 AC159188.2-201ENSMUST00000224103 1301 ntBASIC8.6□□□□□ -1.03
Pcdhb7Q8CDY9 Gm26893-202ENSMUST00000180965 2079 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Pcdhb7Q8CDY9 Gm26552-202ENSMUST00000180980 2079 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Pcdhb7Q8CDY9 Gm29507-201ENSMUST00000187378 2088 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Pcdhb7Q8CDY9 4930402H05Rik-201ENSMUST00000203115 2829 ntBASIC8.6□□□□□ -1.03
Pcdhb7Q8CDY9 Olfr214-205ENSMUST00000217313 2802 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Pcdhb7Q8CDY9 Dnttip2-201ENSMUST00000035776 2429 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Pcdhb7Q8CDY9 Sh2d2a-201ENSMUST00000029709 4484 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
Pcdhb7Q8CDY9 Palb2-203ENSMUST00000106468 3304 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Pcdhb7Q8CDY9 Gm43071-201ENSMUST00000197233 2032 ntBASIC8.6□□□□□ -1.03
Pcdhb7Q8CDY9 Sv2c-201ENSMUST00000161263 9101 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Pcdhb7Q8CDY9 Gm10373-201ENSMUST00000100683 668 ntTSL 2 BASIC8.6□□□□□ -1.03
Pcdhb7Q8CDY9 Mup19-202ENSMUST00000107477 720 ntAPPRIS ALT2 TSL 2 BASIC8.6□□□□□ -1.03
Pcdhb7Q8CDY9 Ms4a3-201ENSMUST00000112984 1010 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Pcdhb7Q8CDY9 Clec4a3-202ENSMUST00000117173 1165 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Pcdhb7Q8CDY9 Gm14278-201ENSMUST00000117381 878 ntBASIC8.6□□□□□ -1.03
Pcdhb7Q8CDY9 Olfr1159-ps1-201ENSMUST00000117651 913 ntBASIC8.6□□□□□ -1.03
Pcdhb7Q8CDY9 Gm12220-201ENSMUST00000118476 172 ntBASIC8.6□□□□□ -1.03
Pcdhb7Q8CDY9 Gm15484-201ENSMUST00000118871 828 ntBASIC8.6□□□□□ -1.03
Pcdhb7Q8CDY9 Gm13655-201ENSMUST00000119695 745 ntBASIC8.6□□□□□ -1.03
Pcdhb7Q8CDY9 Gm14712-201ENSMUST00000120195 772 ntBASIC8.6□□□□□ -1.03
Pcdhb7Q8CDY9 Gm12224-202ENSMUST00000127107 726 ntTSL 3 BASIC8.6□□□□□ -1.03
Pcdhb7Q8CDY9 Gm13377-201ENSMUST00000137984 683 ntBASIC8.6□□□□□ -1.03
Pcdhb7Q8CDY9 Ctla2b-202ENSMUST00000171347 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Pcdhb7Q8CDY9 Elf5-207ENSMUST00000171693 965 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Pcdhb7Q8CDY9 Mir5135-201ENSMUST00000174997 79 ntBASIC8.6□□□□□ -1.03
Pcdhb7Q8CDY9 Gm21882-201ENSMUST00000178332 1083 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Pcdhb7Q8CDY9 Gm6919-201ENSMUST00000180049 483 ntBASIC8.6□□□□□ -1.03
Pcdhb7Q8CDY9 Gm7160-201ENSMUST00000185535 471 ntTSL 2 BASIC8.6□□□□□ -1.03
Pcdhb7Q8CDY9 Gm29263-201ENSMUST00000188718 463 ntBASIC8.6□□□□□ -1.03
Pcdhb7Q8CDY9 Gm29593-201ENSMUST00000189827 620 ntTSL 5 BASIC8.6□□□□□ -1.03
Pcdhb7Q8CDY9 Gm42457-201ENSMUST00000197572 367 ntTSL 2 BASIC8.6□□□□□ -1.03
Pcdhb7Q8CDY9 Gm20223-201ENSMUST00000199932 805 ntBASIC8.6□□□□□ -1.03
Pcdhb7Q8CDY9 Gm45227-201ENSMUST00000205585 169 ntBASIC8.6□□□□□ -1.03
Pcdhb7Q8CDY9 4930405G09Rik-201ENSMUST00000207912 1060 ntBASIC8.6□□□□□ -1.03
Pcdhb7Q8CDY9 Gm19032-201ENSMUST00000208584 592 ntBASIC8.6□□□□□ -1.03
Pcdhb7Q8CDY9 Gm31784-201ENSMUST00000209523 1053 ntTSL 5 BASIC8.6□□□□□ -1.03
Pcdhb7Q8CDY9 Olfr856-ps1-201ENSMUST00000212177 948 ntBASIC8.6□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms