Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm19148-201ENSMUST00000197045 429 ntBASIC6.89□□□□□ -1.31
Col8a1Q00780 Gm44134-201ENSMUST00000203064 661 ntTSL 2 BASIC6.89□□□□□ -1.31
Col8a1Q00780 Gm5885-202ENSMUST00000203357 528 ntBASIC6.89□□□□□ -1.31
Col8a1Q00780 Olfr8-202ENSMUST00000203851 1009 ntAPPRIS P1 TSL 3 BASIC6.89□□□□□ -1.31
Col8a1Q00780 Gm44018-201ENSMUST00000204471 407 ntBASIC6.89□□□□□ -1.31
Col8a1Q00780 Gm45042-201ENSMUST00000207377 211 ntBASIC6.89□□□□□ -1.31
Col8a1Q00780 9530078K11Rik-201ENSMUST00000208883 694 ntBASIC6.89□□□□□ -1.31
Col8a1Q00780 4933431C10Rik-201ENSMUST00000208973 1266 ntBASIC6.89□□□□□ -1.31
Col8a1Q00780 Znrd1as-204ENSMUST00000209623 1218 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
Col8a1Q00780 Gm45240-201ENSMUST00000211437 674 ntBASIC6.89□□□□□ -1.31
Col8a1Q00780 Gm45764-201ENSMUST00000213047 571 ntTSL 5 BASIC6.89□□□□□ -1.31
Col8a1Q00780 AC171204.1-201ENSMUST00000215867 975 ntTSL 5 BASIC6.89□□□□□ -1.31
Col8a1Q00780 4930503E24Rik-202ENSMUST00000219657 942 ntBASIC6.89□□□□□ -1.31
Col8a1Q00780 Gcnt2-204ENSMUST00000223570 335 ntBASIC6.89□□□□□ -1.31
Col8a1Q00780 Vmn1r2-202ENSMUST00000226198 1126 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Col8a1Q00780 AC131100.1-201ENSMUST00000226328 470 ntBASIC6.89□□□□□ -1.31
Col8a1Q00780 AC164302.1-201ENSMUST00000227036 433 ntBASIC6.89□□□□□ -1.31
Col8a1Q00780 Ssbp1-201ENSMUST00000031971 1063 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Col8a1Q00780 Gkn1-201ENSMUST00000032129 1250 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Col8a1Q00780 Olfr901-201ENSMUST00000063716 936 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Col8a1Q00780 Olfr298-201ENSMUST00000077800 999 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Col8a1Q00780 A630095E13Rik-201ENSMUST00000093868 619 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Col8a1Q00780 Olfr1208-201ENSMUST00000099810 1075 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Col8a1Q00780 Inpp5d-211ENSMUST00000170300 3942 ntTSL 2 BASIC6.89□□□□□ -1.31
Col8a1Q00780 Gria2-202ENSMUST00000107745 4026 ntAPPRIS ALT1 TSL 5 BASIC6.89□□□□□ -1.31
Col8a1Q00780 4933406K04Rik-203ENSMUST00000135423 1391 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Col8a1Q00780 Rfpl4-202ENSMUST00000179971 1445 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Col8a1Q00780 Olfr1188-202ENSMUST00000217131 1406 ntAPPRIS ALT2 TSL 3 BASIC6.89□□□□□ -1.31
Col8a1Q00780 4933427D14Rik-201ENSMUST00000108505 1495 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Col8a1Q00780 AC130831.1-201ENSMUST00000224546 1474 ntBASIC6.89□□□□□ -1.31
Col8a1Q00780 Phyhipl-206ENSMUST00000162251 1540 ntTSL 3 BASIC6.89□□□□□ -1.31
Col8a1Q00780 Brdt-202ENSMUST00000112677 1607 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Col8a1Q00780 Gm45477-201ENSMUST00000200213 5498 ntBASIC6.89□□□□□ -1.31
Col8a1Q00780 Tmem69-202ENSMUST00000106478 1962 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Col8a1Q00780 Ikbkg-217ENSMUST00000164101 6788 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
Col8a1Q00780 Ikbkg-218ENSMUST00000180230 6785 ntAPPRIS P3 TSL 5 BASIC6.89□□□□□ -1.31
Col8a1Q00780 Pde10a-203ENSMUST00000115708 2471 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Col8a1Q00780 Papola-215ENSMUST00000170002 2605 ntTSL 5 BASIC6.89□□□□□ -1.31
Col8a1Q00780 Hnrnpk-224ENSMUST00000224182 2754 ntBASIC6.89□□□□□ -1.31
Col8a1Q00780 Gm7389-201ENSMUST00000181162 2884 ntBASIC6.89□□□□□ -1.31
Col8a1Q00780 Sp1-202ENSMUST00000163709 3134 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Col8a1Q00780 Rnf19a-203ENSMUST00000228358 3452 ntBASIC6.89□□□□□ -1.31
Col8a1Q00780 Eps15-202ENSMUST00000102729 5190 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Col8a1Q00780 Rbpj-201ENSMUST00000037618 5459 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Col8a1Q00780 Hspbap1-201ENSMUST00000023555 4590 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Col8a1Q00780 Gm37465-201ENSMUST00000192845 3290 ntBASIC6.88□□□□□ -1.31
Col8a1Q00780 A730085K08Rik-201ENSMUST00000177015 2013 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Col8a1Q00780 Fam90a1a-201ENSMUST00000110741 1887 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Col8a1Q00780 Gm11690-201ENSMUST00000128183 1856 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Col8a1Q00780 Olfr549-202ENSMUST00000217478 1891 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Col8a1Q00780 Ctse-202ENSMUST00000112411 1837 ntTSL 5 BASIC6.88□□□□□ -1.31
Col8a1Q00780 Zwilch-211ENSMUST00000176794 1746 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
Col8a1Q00780 Wrn-204ENSMUST00000211498 4856 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Col8a1Q00780 Ceacam1-208ENSMUST00000206676 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Col8a1Q00780 Tead1-206ENSMUST00000164363 1495 ntAPPRIS P4 TSL 5 BASIC6.88□□□□□ -1.31
Col8a1Q00780 Gm7982-201ENSMUST00000101011 1443 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
Col8a1Q00780 Gm6351-201ENSMUST00000101021 1443 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
Col8a1Q00780 Gm6710-201ENSMUST00000109011 1445 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Col8a1Q00780 Gm7682-201ENSMUST00000098289 1443 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
Col8a1Q00780 Olfr181-201ENSMUST00000075361 1391 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
Col8a1Q00780 Spag9-201ENSMUST00000024979 6756 ntTSL 5 BASIC6.88□□□□□ -1.31
Col8a1Q00780 Il18bp-201ENSMUST00000094134 1311 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Col8a1Q00780 Cga-202ENSMUST00000108130 609 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Col8a1Q00780 Gm14854-201ENSMUST00000117758 841 ntBASIC6.88□□□□□ -1.31
Col8a1Q00780 Anp32-ps-201ENSMUST00000118265 388 ntBASIC6.88□□□□□ -1.31
Col8a1Q00780 Gm13156-201ENSMUST00000118348 321 ntBASIC6.88□□□□□ -1.31
Col8a1Q00780 Gm15665-201ENSMUST00000119116 847 ntBASIC6.88□□□□□ -1.31
Col8a1Q00780 Vmn1r-ps102-201ENSMUST00000120663 886 ntBASIC6.88□□□□□ -1.31
Col8a1Q00780 Gm12583-201ENSMUST00000120677 853 ntBASIC6.88□□□□□ -1.31
Col8a1Q00780 Gm11689-201ENSMUST00000120766 302 ntBASIC6.88□□□□□ -1.31
Col8a1Q00780 Gm11726-201ENSMUST00000121028 424 ntBASIC6.88□□□□□ -1.31
Col8a1Q00780 Gm15227-201ENSMUST00000121844 399 ntBASIC6.88□□□□□ -1.31
Col8a1Q00780 4930419G24Rik-201ENSMUST00000125494 1058 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Col8a1Q00780 Gm12590-201ENSMUST00000134226 404 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Col8a1Q00780 1700092C02Rik-201ENSMUST00000134397 359 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Col8a1Q00780 Lce6a-201ENSMUST00000138403 795 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Col8a1Q00780 Gm12126-201ENSMUST00000147717 619 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Col8a1Q00780 Gm25660-201ENSMUST00000158470 104 ntBASIC6.88□□□□□ -1.31
Col8a1Q00780 Gm26401-201ENSMUST00000158502 76 ntBASIC6.88□□□□□ -1.31
Col8a1Q00780 Gm22424-201ENSMUST00000158527 87 ntBASIC6.88□□□□□ -1.31
Col8a1Q00780 Gm24682-201ENSMUST00000158764 137 ntBASIC6.88□□□□□ -1.31
Col8a1Q00780 Gm17096-201ENSMUST00000172037 733 ntTSL 5 BASIC6.88□□□□□ -1.31
Col8a1Q00780 Dxo-208ENSMUST00000174092 738 ntTSL 5 BASIC6.88□□□□□ -1.31
Col8a1Q00780 Gm26269-201ENSMUST00000180144 126 ntBASIC6.88□□□□□ -1.31
Col8a1Q00780 Gm9999-202ENSMUST00000185832 335 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Col8a1Q00780 Fam122c-203ENSMUST00000186314 898 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
Col8a1Q00780 Gm28193-201ENSMUST00000189863 615 ntBASIC6.88□□□□□ -1.31
Col8a1Q00780 4933404I11Rik-201ENSMUST00000190294 1202 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Col8a1Q00780 Gm36994-201ENSMUST00000192941 492 ntBASIC6.88□□□□□ -1.31
Col8a1Q00780 Gm43226-201ENSMUST00000202438 259 ntBASIC6.88□□□□□ -1.31
Col8a1Q00780 Gm44233-201ENSMUST00000203616 226 ntBASIC6.88□□□□□ -1.31
Col8a1Q00780 Gm43905-201ENSMUST00000204516 204 ntBASIC6.88□□□□□ -1.31
Col8a1Q00780 Tas2r142-ps5-201ENSMUST00000204651 929 ntBASIC6.88□□□□□ -1.31
Col8a1Q00780 Gm18973-201ENSMUST00000205814 511 ntBASIC6.88□□□□□ -1.31
Col8a1Q00780 BC060293-201ENSMUST00000207005 1104 ntBASIC6.88□□□□□ -1.31
Col8a1Q00780 Gm44577-201ENSMUST00000207413 1284 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Col8a1Q00780 Gm45463-202ENSMUST00000210735 1188 ntTSL 5 BASIC6.88□□□□□ -1.31
Col8a1Q00780 Gm3011-201ENSMUST00000215669 582 ntBASIC6.88□□□□□ -1.31
Col8a1Q00780 Olfr32-206ENSMUST00000215765 1241 ntAPPRIS P1 TSL 3 BASIC6.88□□□□□ -1.31
Col8a1Q00780 AC158239.1-201ENSMUST00000216890 779 ntTSL 5 BASIC6.88□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 110.5 ms