Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 2610524H06Rik-201ENSMUST00000100850 947 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Hmgb1P63158 Zcwpw2-201ENSMUST00000111769 1505 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Hmgb1P63158 Gm11922-201ENSMUST00000118967 475 ntBASIC8.67□□□□□ -1.02
Hmgb1P63158 Gm2199-201ENSMUST00000119065 874 ntBASIC8.67□□□□□ -1.02
Hmgb1P63158 Hmgn2-ps1-201ENSMUST00000120716 279 ntBASIC8.67□□□□□ -1.02
Hmgb1P63158 Gm9575-201ENSMUST00000122140 1339 ntBASIC8.67□□□□□ -1.02
Hmgb1P63158 Gm15941-204ENSMUST00000135401 726 ntTSL 3 BASIC8.67□□□□□ -1.02
Hmgb1P63158 Gm15324-201ENSMUST00000139397 355 ntTSL 2 BASIC8.67□□□□□ -1.02
Hmgb1P63158 Gm23533-201ENSMUST00000157540 245 ntBASIC8.67□□□□□ -1.02
Hmgb1P63158 Gm22847-201ENSMUST00000157707 105 ntBASIC8.67□□□□□ -1.02
Hmgb1P63158 Gm23259-201ENSMUST00000158318 303 ntBASIC8.67□□□□□ -1.02
Hmgb1P63158 Gm23116-201ENSMUST00000158481 67 ntBASIC8.67□□□□□ -1.02
Hmgb1P63158 Gm16554-201ENSMUST00000159471 460 ntTSL 3 BASIC8.67□□□□□ -1.02
Hmgb1P63158 Gm17197-201ENSMUST00000163160 452 ntTSL 2 BASIC8.67□□□□□ -1.02
Hmgb1P63158 Bmpr1a-202ENSMUST00000165280 1945 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Hmgb1P63158 Vmn2r15-201ENSMUST00000167133 2568 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
Hmgb1P63158 Gm6904-201ENSMUST00000168702 898 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
Hmgb1P63158 Gm10182-201ENSMUST00000178676 273 ntBASIC8.67□□□□□ -1.02
Hmgb1P63158 Rfpl4-202ENSMUST00000179971 1445 ntAPPRIS P2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Hmgb1P63158 9530027J09Rik-201ENSMUST00000180584 1684 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Hmgb1P63158 Il6st-204ENSMUST00000183829 612 ntTSL 5 BASIC8.67□□□□□ -1.02
Hmgb1P63158 Gm37249-201ENSMUST00000195185 2869 ntBASIC8.67□□□□□ -1.02
Hmgb1P63158 Gm43287-201ENSMUST00000197747 600 ntBASIC8.67□□□□□ -1.02
Hmgb1P63158 Gm43647-201ENSMUST00000198142 486 ntTSL 5 BASIC8.67□□□□□ -1.02
Hmgb1P63158 Gm6249-201ENSMUST00000211142 3314 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Hmgb1P63158 Gm39662-201ENSMUST00000211909 1227 ntTSL 5 BASIC8.67□□□□□ -1.02
Hmgb1P63158 Cep290-210ENSMUST00000220346 8211 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
Hmgb1P63158 Gm2099-201ENSMUST00000220979 412 ntBASIC8.67□□□□□ -1.02
Hmgb1P63158 AC166574.1-201ENSMUST00000226916 1309 ntBASIC8.67□□□□□ -1.02
Hmgb1P63158 Spp2-201ENSMUST00000027518 928 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Hmgb1P63158 Ssr3-201ENSMUST00000029414 2957 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Hmgb1P63158 Frg1-201ENSMUST00000033999 1039 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Hmgb1P63158 Rasgrf1-201ENSMUST00000034909 853 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Hmgb1P63158 Gm5514-201ENSMUST00000060477 306 ntBASIC8.67□□□□□ -1.02
Hmgb1P63158 A630001G21Rik-201ENSMUST00000064788 1353 ntAPPRIS P1 TSL 2 BASIC8.67□□□□□ -1.02
Hmgb1P63158 Pcdh17-201ENSMUST00000071370 11451 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Hmgb1P63158 Olfr1280-201ENSMUST00000082167 1003 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
Hmgb1P63158 Rab25-201ENSMUST00000008745 1081 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Hmgb1P63158 Olfr1283-201ENSMUST00000090328 1026 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
Hmgb1P63158 Unc13c-202ENSMUST00000184666 8796 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
Hmgb1P63158 Nudt7-202ENSMUST00000073521 3543 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
Hmgb1P63158 Nxpe4-201ENSMUST00000093853 3173 ntAPPRIS P2 TSL 5 BASIC8.67□□□□□ -1.02
Hmgb1P63158 Vmn2r-ps130-201ENSMUST00000175853 2568 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
Hmgb1P63158 Vmn2r-ps129-201ENSMUST00000177509 2568 ntBASIC8.67□□□□□ -1.02
Hmgb1P63158 Gm14244-201ENSMUST00000155688 2410 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Hmgb1P63158 Gm38315-201ENSMUST00000194286 2437 ntBASIC8.66□□□□□ -1.02
Hmgb1P63158 Spam1-202ENSMUST00000202331 2100 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Hmgb1P63158 Nsun2-201ENSMUST00000022087 4164 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Hmgb1P63158 Slc12a6-201ENSMUST00000028549 6105 ntAPPRIS P4 TSL 1 (best) BASIC8.66□□□□□ -1.02
Hmgb1P63158 Olfr1320-202ENSMUST00000214273 1982 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
Hmgb1P63158 Olfr1186-203ENSMUST00000216978 1745 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
Hmgb1P63158 Gm34653-201ENSMUST00000201786 1658 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
Hmgb1P63158 Dgkh-204ENSMUST00000227767 3319 ntBASIC8.66□□□□□ -1.02
Hmgb1P63158 Gm45737-201ENSMUST00000208344 1612 ntBASIC8.66□□□□□ -1.02
Hmgb1P63158 AC158115.1-201ENSMUST00000222830 3182 ntBASIC8.66□□□□□ -1.02
Hmgb1P63158 Add3-203ENSMUST00000111741 4520 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
Hmgb1P63158 EU599041-203ENSMUST00000205748 1492 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Hmgb1P63158 Htr1d-201ENSMUST00000088677 2904 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Hmgb1P63158 Cyfip1-202ENSMUST00000085255 4195 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Hmgb1P63158 Crb1-202ENSMUST00000196402 2711 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Hmgb1P63158 Gm14036-201ENSMUST00000118248 480 ntBASIC8.66□□□□□ -1.02
Hmgb1P63158 Gm12401-201ENSMUST00000118435 228 ntBASIC8.66□□□□□ -1.02
Hmgb1P63158 Gm12687-201ENSMUST00000119752 706 ntBASIC8.66□□□□□ -1.02
Hmgb1P63158 Gm12692-201ENSMUST00000121092 546 ntBASIC8.66□□□□□ -1.02
Hmgb1P63158 Elobl-203ENSMUST00000121228 704 ntAPPRIS P1 TSL 2 BASIC8.66□□□□□ -1.02
Hmgb1P63158 Gm25780-201ENSMUST00000122528 253 ntBASIC8.66□□□□□ -1.02
Hmgb1P63158 1700056N10Rik-201ENSMUST00000141875 1043 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Hmgb1P63158 Gm8813-201ENSMUST00000155930 595 ntBASIC8.66□□□□□ -1.02
Hmgb1P63158 Gm18953-201ENSMUST00000175694 300 ntBASIC8.66□□□□□ -1.02
Hmgb1P63158 Gm25442-201ENSMUST00000177270 92 ntBASIC8.66□□□□□ -1.02
Hmgb1P63158 Gm19872-201ENSMUST00000183446 687 ntTSL 2 BASIC8.66□□□□□ -1.02
Hmgb1P63158 Ighv13-2-202ENSMUST00000183954 302 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
Hmgb1P63158 Gm27197-201ENSMUST00000184325 479 ntTSL 3 BASIC8.66□□□□□ -1.02
Hmgb1P63158 Gm28652-201ENSMUST00000187008 599 ntTSL 5 BASIC8.66□□□□□ -1.02
Hmgb1P63158 Mrgprc3-ps-201ENSMUST00000189876 955 ntBASIC8.66□□□□□ -1.02
Hmgb1P63158 Tmem265-202ENSMUST00000190278 587 ntTSL 3 BASIC8.66□□□□□ -1.02
Hmgb1P63158 Gm28401-202ENSMUST00000190769 550 ntTSL 5 BASIC8.66□□□□□ -1.02
Hmgb1P63158 2510016D11Rik-201ENSMUST00000201971 985 ntBASIC8.66□□□□□ -1.02
Hmgb1P63158 1700021F13Rik-202ENSMUST00000202665 469 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Hmgb1P63158 Olfr1389-201ENSMUST00000203369 1073 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
Hmgb1P63158 Gm31749-201ENSMUST00000206873 598 ntTSL 3 BASIC8.66□□□□□ -1.02
Hmgb1P63158 Olfr1422-ps1-201ENSMUST00000208076 743 ntBASIC8.66□□□□□ -1.02
Hmgb1P63158 Gm45272-202ENSMUST00000209875 502 ntTSL 3 BASIC8.66□□□□□ -1.02
Hmgb1P63158 2310003N18Rik-201ENSMUST00000215655 458 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Hmgb1P63158 Gm33778-201ENSMUST00000216884 704 ntBASIC8.66□□□□□ -1.02
Hmgb1P63158 Gm18024-201ENSMUST00000218516 690 ntBASIC8.66□□□□□ -1.02
Hmgb1P63158 Gm33682-201ENSMUST00000222233 256 ntTSL 3 BASIC8.66□□□□□ -1.02
Hmgb1P63158 AC130829.2-201ENSMUST00000222931 127 ntBASIC8.66□□□□□ -1.02
Hmgb1P63158 CT009515.2-201ENSMUST00000226126 736 ntBASIC8.66□□□□□ -1.02
Hmgb1P63158 AC154562.1-201ENSMUST00000226140 966 ntBASIC8.66□□□□□ -1.02
Hmgb1P63158 Mucl2-202ENSMUST00000226584 823 ntAPPRIS ALT2 BASIC8.66□□□□□ -1.02
Hmgb1P63158 Ndufa7-201ENSMUST00000048249 508 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Hmgb1P63158 Tex37-201ENSMUST00000063456 814 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Hmgb1P63158 Olfr982-201ENSMUST00000054051 5576 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
Hmgb1P63158 Zfp52-201ENSMUST00000079242 2175 ntAPPRIS P1 TSL 3 BASIC8.66□□□□□ -1.02
Hmgb1P63158 Med12l-202ENSMUST00000040325 10159 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
Hmgb1P63158 4930432O09Rik-201ENSMUST00000219710 1986 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Hmgb1P63158 Gbp2b-201ENSMUST00000029936 2823 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Hmgb1P63158 Gmeb1-203ENSMUST00000105965 4632 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Hmgb1P63158 Gucy1a3-201ENSMUST00000048976 4554 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms