Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Gm13649-201ENSMUST00000122325 606 ntBASIC6.73□□□□□ -1.33
P20040 Gm1947-201ENSMUST00000122451 910 ntBASIC6.73□□□□□ -1.33
P20040 Gm12828-201ENSMUST00000136115 289 ntTSL 3 BASIC6.73□□□□□ -1.33
P20040 Alg13-207ENSMUST00000149330 479 ntTSL 2 BASIC6.73□□□□□ -1.33
P20040 A930031H19Rik-202ENSMUST00000153810 949 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
P20040 Gm22424-201ENSMUST00000158527 87 ntBASIC6.73□□□□□ -1.33
P20040 Gm26641-201ENSMUST00000181499 954 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
P20040 Gm6931-201ENSMUST00000183103 371 ntBASIC6.73□□□□□ -1.33
P20040 Gm27435-201ENSMUST00000183588 88 ntBASIC6.73□□□□□ -1.33
P20040 Avpr1b-202ENSMUST00000190410 623 ntTSL 5 BASIC6.73□□□□□ -1.33
P20040 Gm38254-201ENSMUST00000192276 1009 ntBASIC6.73□□□□□ -1.33
P20040 Mir1897-202ENSMUST00000198006 79 ntBASIC6.73□□□□□ -1.33
P20040 Gm43008-201ENSMUST00000202346 286 ntBASIC6.73□□□□□ -1.33
P20040 Gm44764-202ENSMUST00000204912 671 ntTSL 3 BASIC6.73□□□□□ -1.33
P20040 Gm17909-201ENSMUST00000207587 907 ntBASIC6.73□□□□□ -1.33
P20040 Gm9354-201ENSMUST00000209075 468 ntBASIC6.73□□□□□ -1.33
P20040 CT025685.1-201ENSMUST00000213716 150 ntBASIC6.73□□□□□ -1.33
P20040 AC154307.1-201ENSMUST00000214799 90 ntBASIC6.73□□□□□ -1.33
P20040 Gm18378-201ENSMUST00000216245 628 ntBASIC6.73□□□□□ -1.33
P20040 AC160863.3-201ENSMUST00000220129 1228 ntTSL 5 BASIC6.73□□□□□ -1.33
P20040 AC102689.1-201ENSMUST00000220511 1090 ntBASIC6.73□□□□□ -1.33
P20040 Wdr66-201ENSMUST00000069311 978 ntTSL 5 BASIC6.73□□□□□ -1.33
P20040 Olfr402-201ENSMUST00000073675 1012 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
P20040 Gm3383-201ENSMUST00000096171 748 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
P20040 Musk-205ENSMUST00000102893 3323 ntTSL 5 BASIC6.73□□□□□ -1.33
P20040 CT025535.2-201ENSMUST00000228572 7441 ntBASIC6.73□□□□□ -1.33
P20040 D030045P18Rik-203ENSMUST00000214947 1938 ntTSL 5 BASIC6.73□□□□□ -1.33
P20040 Gpm6b-202ENSMUST00000112223 4764 ntAPPRIS ALT1 TSL 1 (best) BASIC6.73□□□□□ -1.33
P20040 Gm7954-201ENSMUST00000164967 1403 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
P20040 Gm8082-201ENSMUST00000165349 1403 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
P20040 Ceacam2-203ENSMUST00000066503 3140 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
P20040 Enpep-201ENSMUST00000029658 4181 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
P20040 Ttc9c-202ENSMUST00000096751 3509 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
P20040 Sema6a-210ENSMUST00000156422 3291 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
P20040 Gabpb2-202ENSMUST00000098873 8272 ntAPPRIS P2 TSL 5 BASIC6.73□□□□□ -1.33
P20040 Fcgr3-201ENSMUST00000164044 1347 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
P20040 Glrb-206ENSMUST00000194085 1341 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
P20040 Gm8836-201ENSMUST00000198196 1348 ntBASIC6.73□□□□□ -1.33
P20040 Dnajc18-201ENSMUST00000025208 5169 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
P20040 Gm30400-202ENSMUST00000210562 2115 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
P20040 Psg19-201ENSMUST00000004657 2105 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
P20040 Dopey1-218ENSMUST00000190957 9187 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
P20040 Sorbs2-207ENSMUST00000130011 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
P20040 6720489N17Rik-203ENSMUST00000223338 1457 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
P20040 Gm21671-201ENSMUST00000162387 2421 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
P20040 CU024890.1-201ENSMUST00000221361 2019 ntBASIC6.72□□□□□ -1.33
P20040 Prokr2-201ENSMUST00000049997 4486 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
P20040 Rasgrf1-202ENSMUST00000034912 4092 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
P20040 Gm15509-201ENSMUST00000162615 2162 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
P20040 Meis2-206ENSMUST00000110908 3697 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
P20040 Olfr295-202ENSMUST00000215365 6013 ntAPPRIS P1 TSL 3 BASIC6.72□□□□□ -1.33
P20040 Gm37855-201ENSMUST00000192571 3700 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
P20040 Tdrkh-201ENSMUST00000045245 2642 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
P20040 Zfp85os-201ENSMUST00000049518 2624 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
P20040 Gm37902-201ENSMUST00000192839 1683 ntBASIC6.72□□□□□ -1.33
P20040 Ate1-208ENSMUST00000216011 1680 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
P20040 Olfr678-202ENSMUST00000213622 2369 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
P20040 Lin54-204ENSMUST00000137750 4056 ntTSL 5 BASIC6.72□□□□□ -1.33
P20040 Gm28651-202ENSMUST00000227968 2693 ntBASIC6.72□□□□□ -1.33
P20040 Gm24334-201ENSMUST00000104210 128 ntBASIC6.72□□□□□ -1.33
P20040 Gm12838-201ENSMUST00000116278 325 ntBASIC6.72□□□□□ -1.33
P20040 Gm7831-201ENSMUST00000117990 552 ntBASIC6.72□□□□□ -1.33
P20040 Gm8084-201ENSMUST00000120807 752 ntBASIC6.72□□□□□ -1.33
P20040 Gm12297-201ENSMUST00000121380 979 ntBASIC6.72□□□□□ -1.33
P20040 Gm12870-201ENSMUST00000121383 1016 ntBASIC6.72□□□□□ -1.33
P20040 Anp32b-ps1-201ENSMUST00000122215 758 ntBASIC6.72□□□□□ -1.33
P20040 Gm13658-201ENSMUST00000135329 929 ntTSL 5 BASIC6.72□□□□□ -1.33
P20040 Gm11646-201ENSMUST00000135857 397 ntTSL 3 BASIC6.72□□□□□ -1.33
P20040 Gm26408-201ENSMUST00000157672 127 ntBASIC6.72□□□□□ -1.33
P20040 Scarna17-201ENSMUST00000158064 79 ntBASIC6.72□□□□□ -1.33
P20040 Gm25372-201ENSMUST00000158161 255 ntBASIC6.72□□□□□ -1.33
P20040 Pid1-203ENSMUST00000175996 892 ntTSL 3 BASIC6.72□□□□□ -1.33
P20040 BC035044-202ENSMUST00000178918 466 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
P20040 1700015G11Rik-201ENSMUST00000180038 397 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
P20040 BC065403-202ENSMUST00000184796 1043 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
P20040 Gm28208-201ENSMUST00000185941 1157 ntTSL 5 BASIC6.72□□□□□ -1.33
P20040 Gm29672-201ENSMUST00000187118 1038 ntTSL 5 BASIC6.72□□□□□ -1.33
P20040 Gm28853-202ENSMUST00000188084 1157 ntTSL 5 BASIC6.72□□□□□ -1.33
P20040 9330159M07Rik-204ENSMUST00000188156 737 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
P20040 Gm20379-201ENSMUST00000188317 1204 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
P20040 Gm29143-201ENSMUST00000189462 201 ntBASIC6.72□□□□□ -1.33
P20040 Gm28430-201ENSMUST00000191031 628 ntTSL 5 BASIC6.72□□□□□ -1.33
P20040 Gm28133-202ENSMUST00000191344 1158 ntTSL 5 BASIC6.72□□□□□ -1.33
P20040 Mllt11-202ENSMUST00000196025 624 ntAPPRIS P1 TSL 3 BASIC6.72□□□□□ -1.33
P20040 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
P20040 Gm17660-203ENSMUST00000198485 522 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
P20040 Gm44427-201ENSMUST00000204123 456 ntTSL 3 BASIC6.72□□□□□ -1.33
P20040 Mypopos-204ENSMUST00000206381 473 ntTSL 2 BASIC6.72□□□□□ -1.33
P20040 Gm44508-201ENSMUST00000206943 1157 ntBASIC6.72□□□□□ -1.33
P20040 Il15-203ENSMUST00000209573 1164 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
P20040 Gm33096-201ENSMUST00000210189 493 ntBASIC6.72□□□□□ -1.33
P20040 4930555F03Rik-205ENSMUST00000212179 1257 ntTSL 5 BASIC6.72□□□□□ -1.33
P20040 Olfr433-202ENSMUST00000214690 2968 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
P20040 Gm18619-201ENSMUST00000222722 1147 ntBASIC6.72□□□□□ -1.33
P20040 Gm36862-202ENSMUST00000222758 1051 ntTSL 5 BASIC6.72□□□□□ -1.33
P20040 AC158531.2-201ENSMUST00000224264 473 ntBASIC6.72□□□□□ -1.33
P20040 Arhgef38-201ENSMUST00000054105 814 ntTSL 5 BASIC6.72□□□□□ -1.33
P20040 Olfr466-201ENSMUST00000058907 927 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
P20040 Gm4956-201ENSMUST00000082032 1148 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
P20040 Ifna4-201ENSMUST00000094973 561 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 74.5 ms