Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm9378-201ENSMUST00000120315 471 ntBASIC7.34□□□□□ -1.23
Clrn1Q8K445 Gm12692-201ENSMUST00000121092 546 ntBASIC7.34□□□□□ -1.23
Clrn1Q8K445 Gm12670-201ENSMUST00000123606 576 ntTSL 2 BASIC7.34□□□□□ -1.23
Clrn1Q8K445 Gm13465-201ENSMUST00000129687 979 ntTSL 2 BASIC7.34□□□□□ -1.23
Clrn1Q8K445 4930439A04Rik-201ENSMUST00000137241 739 ntTSL 3 BASIC7.34□□□□□ -1.23
Clrn1Q8K445 Gm22224-201ENSMUST00000157357 93 ntBASIC7.34□□□□□ -1.23
Clrn1Q8K445 Gm6465-201ENSMUST00000168154 1098 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
Clrn1Q8K445 Gm21293-201ENSMUST00000170919 864 ntTSL 5 BASIC7.34□□□□□ -1.23
Clrn1Q8K445 Gm20528-202ENSMUST00000174821 802 ntTSL 3 BASIC7.34□□□□□ -1.23
Clrn1Q8K445 Gm5698-201ENSMUST00000178317 724 ntBASIC7.34□□□□□ -1.23
Clrn1Q8K445 1600019K03Rik-201ENSMUST00000187829 477 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Clrn1Q8K445 Gm29343-201ENSMUST00000187887 842 ntTSL 5 BASIC7.34□□□□□ -1.23
Clrn1Q8K445 Gm42538-201ENSMUST00000196233 566 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Clrn1Q8K445 Gm42489-201ENSMUST00000198964 669 ntBASIC7.34□□□□□ -1.23
Clrn1Q8K445 Tas2r146-ps1-201ENSMUST00000203065 934 ntBASIC7.34□□□□□ -1.23
Clrn1Q8K445 Gm44245-201ENSMUST00000204304 232 ntBASIC7.34□□□□□ -1.23
Clrn1Q8K445 Tmem156-206ENSMUST00000212640 1271 ntTSL 5 BASIC7.34□□□□□ -1.23
Clrn1Q8K445 Gm39465-202ENSMUST00000215177 470 ntTSL 5 BASIC7.34□□□□□ -1.23
Clrn1Q8K445 AC153561.1-201ENSMUST00000215943 469 ntBASIC7.34□□□□□ -1.23
Clrn1Q8K445 Gm1000-201ENSMUST00000220520 801 ntTSL 3 BASIC7.34□□□□□ -1.23
Clrn1Q8K445 9230112D13Rik-201ENSMUST00000022325 778 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Clrn1Q8K445 AC107452.2-201ENSMUST00000228415 363 ntBASIC7.34□□□□□ -1.23
Clrn1Q8K445 Gng2-201ENSMUST00000055100 572 ntAPPRIS P1 TSL 3 BASIC7.34□□□□□ -1.23
Clrn1Q8K445 Trex1-201ENSMUST00000061973 1084 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Clrn1Q8K445 Tex37-201ENSMUST00000063456 814 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Clrn1Q8K445 Olfr1457-201ENSMUST00000075170 954 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Clrn1Q8K445 Gm24143-201ENSMUST00000082633 145 ntBASIC7.34□□□□□ -1.23
Clrn1Q8K445 Gcnt2-201ENSMUST00000067778 4038 ntAPPRIS P5 TSL 1 (best) BASIC7.34□□□□□ -1.23
Clrn1Q8K445 Rtel1-205ENSMUST00000108815 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
Clrn1Q8K445 AC156025.3-201ENSMUST00000225919 3095 ntBASIC7.34□□□□□ -1.23
Clrn1Q8K445 Prr15l-204ENSMUST00000107636 3545 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Clrn1Q8K445 4931406B18Rik-208ENSMUST00000191516 2566 ntAPPRIS P2 TSL 1 (best) BASIC7.34□□□□□ -1.23
Clrn1Q8K445 AC168056.4-201ENSMUST00000223835 2567 ntBASIC7.34□□□□□ -1.23
Clrn1Q8K445 9530027J09Rik-201ENSMUST00000180584 1684 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Clrn1Q8K445 1700027J07Rik-203ENSMUST00000217501 1884 ntTSL 5 BASIC7.34□□□□□ -1.23
Clrn1Q8K445 Gm5535-208ENSMUST00000210482 1403 ntTSL 5 BASIC7.34□□□□□ -1.23
Clrn1Q8K445 Crb1-202ENSMUST00000196402 2711 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Clrn1Q8K445 Chek2-201ENSMUST00000066160 2276 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.24
Clrn1Q8K445 Olfr370-202ENSMUST00000209408 4600 ntAPPRIS P1 TSL 3 BASIC7.34□□□□□ -1.24
Clrn1Q8K445 Deptor-201ENSMUST00000023056 3300 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.24
Clrn1Q8K445 Musk-201ENSMUST00000081919 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.24
Clrn1Q8K445 AC132384.7-201ENSMUST00000220198 1391 ntBASIC7.33□□□□□ -1.24
Clrn1Q8K445 Rnf213-203ENSMUST00000172235 2422 ntTSL 5 BASIC7.33□□□□□ -1.24
Clrn1Q8K445 Olfr1315-ps1-203ENSMUST00000217078 1559 ntAPPRIS P5 TSL 5 BASIC7.33□□□□□ -1.24
Clrn1Q8K445 Tnfrsf11b-201ENSMUST00000079772 2818 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Clrn1Q8K445 Smg1-201ENSMUST00000032891 15557 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Clrn1Q8K445 Smad5-201ENSMUST00000069557 6584 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Clrn1Q8K445 E330035G20Rik-201ENSMUST00000221094 3002 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Clrn1Q8K445 Dip2b-203ENSMUST00000108971 8127 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Clrn1Q8K445 Prkaa1-202ENSMUST00000228218 4618 ntBASIC7.33□□□□□ -1.24
Clrn1Q8K445 Gm6150-202ENSMUST00000219888 2977 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Clrn1Q8K445 Gm44104-201ENSMUST00000204736 3777 ntBASIC7.33□□□□□ -1.24
Clrn1Q8K445 Gm20609-201ENSMUST00000177104 1527 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Clrn1Q8K445 Olfr1006-201ENSMUST00000099917 1529 ntAPPRIS P1 TSL 2 BASIC7.33□□□□□ -1.24
Clrn1Q8K445 Duxbl2-201ENSMUST00000100810 2312 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Clrn1Q8K445 Tcam1-201ENSMUST00000044462 3511 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Clrn1Q8K445 Abcc12-203ENSMUST00000131423 4893 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Clrn1Q8K445 Ankef1-202ENSMUST00000121717 2875 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Clrn1Q8K445 Crbn-202ENSMUST00000113239 2084 ntAPPRIS P4 TSL 1 (best) BASIC7.33□□□□□ -1.24
Clrn1Q8K445 Gm10860-201ENSMUST00000176934 1888 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Clrn1Q8K445 EU599041-203ENSMUST00000205748 1492 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Clrn1Q8K445 Star-201ENSMUST00000033979 4046 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Clrn1Q8K445 Rps27a-201ENSMUST00000102844 637 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Clrn1Q8K445 Gm24334-201ENSMUST00000104210 128 ntBASIC7.33□□□□□ -1.24
Clrn1Q8K445 Ppih-204ENSMUST00000106319 622 ntTSL 3 BASIC7.33□□□□□ -1.24
Clrn1Q8K445 Fau-ps2-201ENSMUST00000119333 371 ntBASIC7.33□□□□□ -1.24
Clrn1Q8K445 Tm6sf1-202ENSMUST00000119543 1066 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Clrn1Q8K445 Rps25-ps1-201ENSMUST00000119876 378 ntBASIC7.33□□□□□ -1.24
Clrn1Q8K445 Gm15224-201ENSMUST00000120501 388 ntBASIC7.33□□□□□ -1.24
Clrn1Q8K445 Gm12402-201ENSMUST00000120536 334 ntBASIC7.33□□□□□ -1.24
Clrn1Q8K445 Gm11585-201ENSMUST00000120901 569 ntBASIC7.33□□□□□ -1.24
Clrn1Q8K445 Snrp1c-ps2-201ENSMUST00000120976 365 ntBASIC7.33□□□□□ -1.24
Clrn1Q8K445 Gm14957-201ENSMUST00000121069 817 ntBASIC7.33□□□□□ -1.24
Clrn1Q8K445 Gm5931-201ENSMUST00000121308 477 ntBASIC7.33□□□□□ -1.24
Clrn1Q8K445 Gm25266-201ENSMUST00000158521 304 ntBASIC7.33□□□□□ -1.24
Clrn1Q8K445 Gm7162-201ENSMUST00000161205 1024 ntBASIC7.33□□□□□ -1.24
Clrn1Q8K445 Olfr270-202ENSMUST00000172257 939 ntAPPRIS P2 BASIC7.33□□□□□ -1.24
Clrn1Q8K445 Vmn1r-ps62-201ENSMUST00000173275 910 ntBASIC7.33□□□□□ -1.24
Clrn1Q8K445 Gm26505-201ENSMUST00000176208 166 ntBASIC7.33□□□□□ -1.24
Clrn1Q8K445 Gm20617-201ENSMUST00000177082 717 ntTSL 3 BASIC7.33□□□□□ -1.24
Clrn1Q8K445 Gm8167-201ENSMUST00000183320 958 ntBASIC7.33□□□□□ -1.24
Clrn1Q8K445 Gm37247-201ENSMUST00000192549 730 ntBASIC7.33□□□□□ -1.24
Clrn1Q8K445 Gm33571-201ENSMUST00000193271 657 ntBASIC7.33□□□□□ -1.24
Clrn1Q8K445 Igkv8-34-201ENSMUST00000196959 365 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Clrn1Q8K445 Gm40304-201ENSMUST00000202154 268 ntTSL 3 BASIC7.33□□□□□ -1.24
Clrn1Q8K445 Olfr214-202ENSMUST00000203867 1255 ntAPPRIS P1 TSL 3 BASIC7.33□□□□□ -1.24
Clrn1Q8K445 Gm16475-202ENSMUST00000209033 528 ntBASIC7.33□□□□□ -1.24
Clrn1Q8K445 AC155934.1-201ENSMUST00000213802 322 ntTSL 5 BASIC7.33□□□□□ -1.24
Clrn1Q8K445 4930401A07Rik-201ENSMUST00000214657 746 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Clrn1Q8K445 AC142113.2-201ENSMUST00000217425 748 ntBASIC7.33□□□□□ -1.24
Clrn1Q8K445 Gm19161-201ENSMUST00000217958 737 ntBASIC7.33□□□□□ -1.24
Clrn1Q8K445 Gm19169-201ENSMUST00000220109 1246 ntBASIC7.33□□□□□ -1.24
Clrn1Q8K445 Gm7762-201ENSMUST00000220595 604 ntTSL 3 BASIC7.33□□□□□ -1.24
Clrn1Q8K445 AC161374.2-201ENSMUST00000223662 596 ntBASIC7.33□□□□□ -1.24
Clrn1Q8K445 Slurp1-201ENSMUST00000023261 567 ntTSL 5 BASIC7.33□□□□□ -1.24
Clrn1Q8K445 Tmem216-201ENSMUST00000025569 1101 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Clrn1Q8K445 Olfr466-201ENSMUST00000058907 927 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Clrn1Q8K445 Olfr958-201ENSMUST00000062545 942 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Clrn1Q8K445 Olfr432-201ENSMUST00000062665 939 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Clrn1Q8K445 Olfr1469-201ENSMUST00000077538 930 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms