Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Olfr721-ps1-201ENSMUST00000165291 975 ntBASIC8.98□□□□□ -0.97
Nup88Q8CEC0 Gm20500-201ENSMUST00000174621 321 ntTSL 3 BASIC8.98□□□□□ -0.97
Nup88Q8CEC0 Gm15251-201ENSMUST00000177947 883 ntBASIC8.98□□□□□ -0.97
Nup88Q8CEC0 Tdgf1-ps1-201ENSMUST00000179882 516 ntBASIC8.98□□□□□ -0.97
Nup88Q8CEC0 Gm29143-201ENSMUST00000189462 201 ntBASIC8.98□□□□□ -0.97
Nup88Q8CEC0 Gm7804-201ENSMUST00000192784 738 ntTSL 5 BASIC8.98□□□□□ -0.97
Nup88Q8CEC0 Gm38305-201ENSMUST00000194825 223 ntBASIC8.98□□□□□ -0.97
Nup88Q8CEC0 C920008G01Rik-201ENSMUST00000196756 380 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
Nup88Q8CEC0 D130017N08Rik-204ENSMUST00000199836 506 ntTSL 2 BASIC8.98□□□□□ -0.97
Nup88Q8CEC0 5930435M05Rik-202ENSMUST00000207936 414 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Nup88Q8CEC0 Gm36719-201ENSMUST00000219518 927 ntTSL 5 BASIC8.98□□□□□ -0.97
Nup88Q8CEC0 RMST_1.1-213ENSMUST00000220288 792 ntTSL 5 BASIC8.98□□□□□ -0.97
Nup88Q8CEC0 Odf3l1-201ENSMUST00000055036 1080 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Nup88Q8CEC0 Gm5426-201ENSMUST00000074615 312 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
Nup88Q8CEC0 Rnase1-201ENSMUST00000080126 992 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Nup88Q8CEC0 Rpl31-ps20-201ENSMUST00000080982 378 ntBASIC8.98□□□□□ -0.97
Nup88Q8CEC0 AC165260.6-202ENSMUST00000224959 1958 ntBASIC8.98□□□□□ -0.97
Nup88Q8CEC0 Mkks-201ENSMUST00000028730 2935 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Nup88Q8CEC0 Mbnl2-201ENSMUST00000088419 4552 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Nup88Q8CEC0 Tpo-201ENSMUST00000021005 3299 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Nup88Q8CEC0 Gimap4-202ENSMUST00000090070 1804 ntAPPRIS P3 TSL 2 BASIC8.98□□□□□ -0.97
Nup88Q8CEC0 Gm7647-201ENSMUST00000200996 1389 ntBASIC8.98□□□□□ -0.97
Nup88Q8CEC0 9030607J07Rik-201ENSMUST00000202228 1622 ntBASIC8.98□□□□□ -0.97
Nup88Q8CEC0 Gm43970-201ENSMUST00000204346 3605 ntBASIC8.98□□□□□ -0.97
Nup88Q8CEC0 Ms4a13-201ENSMUST00000073380 1375 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
Nup88Q8CEC0 Taf1-206ENSMUST00000149274 5954 ntAPPRIS P2 TSL 5 BASIC8.98□□□□□ -0.97
Nup88Q8CEC0 Golgb1-202ENSMUST00000039855 10847 ntAPPRIS P2 TSL 5 BASIC8.98□□□□□ -0.97
Nup88Q8CEC0 Heatr5a-201ENSMUST00000040583 7763 ntAPPRIS P2 TSL 5 BASIC8.98□□□□□ -0.97
Nup88Q8CEC0 Slco2b1-202ENSMUST00000107086 3993 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
Nup88Q8CEC0 Gm43681-201ENSMUST00000201581 1903 ntBASIC8.97□□□□□ -0.97
Nup88Q8CEC0 Coa7-202ENSMUST00000131656 3714 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Nup88Q8CEC0 Zfp964-201ENSMUST00000169125 1416 ntTSL 3 BASIC8.97□□□□□ -0.97
Nup88Q8CEC0 Ttc9c-202ENSMUST00000096751 3509 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Nup88Q8CEC0 CU024890.1-201ENSMUST00000221361 2019 ntBASIC8.97□□□□□ -0.97
Nup88Q8CEC0 Dgkb-201ENSMUST00000040500 6373 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Nup88Q8CEC0 Phactr4-202ENSMUST00000084249 2349 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Nup88Q8CEC0 Klrb1c-201ENSMUST00000167691 2623 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
Nup88Q8CEC0 Icos-202ENSMUST00000102827 3241 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Nup88Q8CEC0 Gm25083-201ENSMUST00000102319 92 ntBASIC8.97□□□□□ -0.97
Nup88Q8CEC0 Igkv1-117-201ENSMUST00000103317 404 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Nup88Q8CEC0 Eif2s3x-202ENSMUST00000113922 1103 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Nup88Q8CEC0 Gm13526-201ENSMUST00000117970 189 ntBASIC8.97□□□□□ -0.97
Nup88Q8CEC0 Gm8624-201ENSMUST00000118083 432 ntBASIC8.97□□□□□ -0.97
Nup88Q8CEC0 Gm12243-201ENSMUST00000128521 821 ntTSL 3 BASIC8.97□□□□□ -0.97
Nup88Q8CEC0 Gm12144-201ENSMUST00000136288 1292 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Nup88Q8CEC0 Mir1968-201ENSMUST00000157429 68 ntBASIC8.97□□□□□ -0.97
Nup88Q8CEC0 Gm16540-201ENSMUST00000160263 426 ntTSL 5 BASIC8.97□□□□□ -0.97
Nup88Q8CEC0 Rpain-210ENSMUST00000167509 519 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Nup88Q8CEC0 Gm28119-201ENSMUST00000185538 298 ntTSL 5 BASIC8.97□□□□□ -0.97
Nup88Q8CEC0 Arhgap26-218ENSMUST00000187912 312 ntTSL 5 BASIC8.97□□□□□ -0.97
Nup88Q8CEC0 Gm18797-201ENSMUST00000190809 1174 ntBASIC8.97□□□□□ -0.97
Nup88Q8CEC0 Gm38087-201ENSMUST00000193653 265 ntTSL 5 BASIC8.97□□□□□ -0.97
Nup88Q8CEC0 AF067063-202ENSMUST00000195234 885 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Nup88Q8CEC0 1700021F02Rik-201ENSMUST00000197576 350 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Nup88Q8CEC0 Gm43287-201ENSMUST00000197747 600 ntBASIC8.97□□□□□ -0.97
Nup88Q8CEC0 4930563H07Rik-201ENSMUST00000203494 628 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Nup88Q8CEC0 Gm32842-201ENSMUST00000212653 738 ntBASIC8.97□□□□□ -0.97
Nup88Q8CEC0 Gm10123-201ENSMUST00000075723 490 ntBASIC8.97□□□□□ -0.97
Nup88Q8CEC0 Wfdc10-201ENSMUST00000094344 459 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Nup88Q8CEC0 Dock8-201ENSMUST00000025831 7810 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Nup88Q8CEC0 Zfp473-207ENSMUST00000149011 9230 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Nup88Q8CEC0 Phf3-205ENSMUST00000186733 7567 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Nup88Q8CEC0 Dsc3-203ENSMUST00000225110 3123 ntAPPRIS P2 BASIC8.97□□□□□ -0.97
Nup88Q8CEC0 Gm44834-201ENSMUST00000206671 1396 ntBASIC8.97□□□□□ -0.97
Nup88Q8CEC0 AC159193.3-201ENSMUST00000221902 2622 ntBASIC8.97□□□□□ -0.97
Nup88Q8CEC0 Gm45904-201ENSMUST00000213082 2330 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Nup88Q8CEC0 Osbpl6-201ENSMUST00000077972 8037 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Nup88Q8CEC0 Trim30b-204ENSMUST00000164410 3042 ntAPPRIS P5 TSL 1 (best) BASIC8.97□□□□□ -0.97
Nup88Q8CEC0 Olfr122-202ENSMUST00000172582 1620 ntAPPRIS P1 TSL 2 BASIC8.96□□□□□ -0.98
Nup88Q8CEC0 Gm12365-201ENSMUST00000117931 568 ntBASIC8.96□□□□□ -0.98
Nup88Q8CEC0 Gm11907-201ENSMUST00000118918 1007 ntBASIC8.96□□□□□ -0.98
Nup88Q8CEC0 Gm13857-202ENSMUST00000141091 617 ntTSL 3 BASIC8.96□□□□□ -0.98
Nup88Q8CEC0 Fxyd5-207ENSMUST00000161684 1172 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.98
Nup88Q8CEC0 Slc29a1-208ENSMUST00000164769 1226 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Nup88Q8CEC0 Mthfr-ps1-201ENSMUST00000174153 601 ntBASIC8.96□□□□□ -0.98
Nup88Q8CEC0 Gm20797-201ENSMUST00000177894 383 ntBASIC8.96□□□□□ -0.98
Nup88Q8CEC0 Gm6799-201ENSMUST00000186919 573 ntBASIC8.96□□□□□ -0.98
Nup88Q8CEC0 Gm38254-201ENSMUST00000192276 1009 ntBASIC8.96□□□□□ -0.98
Nup88Q8CEC0 A930014E10Rik-201ENSMUST00000205115 546 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Nup88Q8CEC0 Gm7789-201ENSMUST00000210473 701 ntTSL 3 BASIC8.96□□□□□ -0.98
Nup88Q8CEC0 Gm33103-201ENSMUST00000212717 527 ntTSL 3 BASIC8.96□□□□□ -0.98
Nup88Q8CEC0 Gm30132-202ENSMUST00000212825 819 ntTSL 3 BASIC8.96□□□□□ -0.98
Nup88Q8CEC0 AC163041.1-201ENSMUST00000221984 133 ntBASIC8.96□□□□□ -0.98
Nup88Q8CEC0 Nqo2-204ENSMUST00000222740 995 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Nup88Q8CEC0 Arhgef38-201ENSMUST00000054105 814 ntTSL 5 BASIC8.96□□□□□ -0.98
Nup88Q8CEC0 Commd3-201ENSMUST00000061158 935 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Nup88Q8CEC0 Glipr1-201ENSMUST00000074805 1081 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Nup88Q8CEC0 Olfr665-201ENSMUST00000098165 951 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
Nup88Q8CEC0 Ipcef1-203ENSMUST00000105617 6041 ntAPPRIS P3 TSL 5 BASIC8.96□□□□□ -0.98
Nup88Q8CEC0 Gm43123-201ENSMUST00000201893 3471 ntBASIC8.96□□□□□ -0.98
Nup88Q8CEC0 Focad-208ENSMUST00000159342 5456 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
Nup88Q8CEC0 AC153945.1-201ENSMUST00000217761 1722 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Nup88Q8CEC0 Gm43196-201ENSMUST00000201762 2114 ntBASIC8.96□□□□□ -0.98
Nup88Q8CEC0 Gm10419-204ENSMUST00000198585 4059 ntTSL 2 BASIC8.96□□□□□ -0.98
Nup88Q8CEC0 8030451A03Rik-203ENSMUST00000141428 2618 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Nup88Q8CEC0 Psmd10-201ENSMUST00000033805 1430 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.98
Nup88Q8CEC0 Dock5-201ENSMUST00000039135 9988 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Nup88Q8CEC0 Lrrtm4-205ENSMUST00000133918 2255 ntAPPRIS ALT1 TSL 5 BASIC8.96□□□□□ -0.98
Nup88Q8CEC0 Ube3c-204ENSMUST00000199032 3171 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Nup88Q8CEC0 Gm44777-201ENSMUST00000205941 4052 ntBASIC8.95□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms