Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Olfr209-204ENSMUST00000213779 564 ntTSL 5 BASIC9.07□□□□□ -0.96
Vps54Q5SPW0 Gm30853-201ENSMUST00000218367 810 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Vps54Q5SPW0 4930520K02Rik-201ENSMUST00000219522 388 ntTSL 3 BASIC9.07□□□□□ -0.96
Vps54Q5SPW0 AC238940.2-201ENSMUST00000224202 330 ntBASIC9.07□□□□□ -0.96
Vps54Q5SPW0 AC125539.1-201ENSMUST00000227423 622 ntBASIC9.07□□□□□ -0.96
Vps54Q5SPW0 Ccdc150-201ENSMUST00000027128 3807 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Vps54Q5SPW0 Xlr4a-201ENSMUST00000078775 1162 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Vps54Q5SPW0 Gm24613-201ENSMUST00000083266 130 ntBASIC9.07□□□□□ -0.96
Vps54Q5SPW0 Il22-201ENSMUST00000096691 1110 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Vps54Q5SPW0 Gm37647-201ENSMUST00000194556 3143 ntBASIC9.07□□□□□ -0.96
Vps54Q5SPW0 Gm21056-201ENSMUST00000221636 4635 ntTSL 5 BASIC9.07□□□□□ -0.96
Vps54Q5SPW0 Trim2-206ENSMUST00000107695 7200 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Vps54Q5SPW0 4930563E22Rik-201ENSMUST00000066087 3313 ntBASIC9.07□□□□□ -0.96
Vps54Q5SPW0 Mapk10-202ENSMUST00000112846 2617 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Vps54Q5SPW0 Gm18957-201ENSMUST00000197623 1813 ntBASIC9.07□□□□□ -0.96
Vps54Q5SPW0 St7-203ENSMUST00000053148 2288 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Vps54Q5SPW0 Ssr1-201ENSMUST00000021864 9333 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Vps54Q5SPW0 Usp40-204ENSMUST00000187758 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Vps54Q5SPW0 Cyp2b19-201ENSMUST00000077855 2740 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Vps54Q5SPW0 AC107757.2-201ENSMUST00000226370 1466 ntBASIC9.07□□□□□ -0.96
Vps54Q5SPW0 Cyfip1-202ENSMUST00000085255 4195 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Vps54Q5SPW0 Pan2-203ENSMUST00000218315 4379 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Vps54Q5SPW0 Sema6a-206ENSMUST00000135790 4339 ntTSL 5 BASIC9.07□□□□□ -0.96
Vps54Q5SPW0 4930518I15Rik-201ENSMUST00000099141 1331 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Vps54Q5SPW0 Gm45182-201ENSMUST00000207579 2404 ntBASIC9.06□□□□□ -0.96
Vps54Q5SPW0 Rnf146-205ENSMUST00000162335 1434 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Vps54Q5SPW0 Cux1-201ENSMUST00000004097 12862 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
Vps54Q5SPW0 Cstf2t-201ENSMUST00000066039 3750 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Vps54Q5SPW0 Gm10687-201ENSMUST00000180670 3233 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Vps54Q5SPW0 Ces1c-201ENSMUST00000034189 1828 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Vps54Q5SPW0 4921521D15Rik-201ENSMUST00000197578 1927 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Vps54Q5SPW0 Gm25276-201ENSMUST00000104300 124 ntBASIC9.06□□□□□ -0.96
Vps54Q5SPW0 Gm8624-201ENSMUST00000118083 432 ntBASIC9.06□□□□□ -0.96
Vps54Q5SPW0 Gm15763-201ENSMUST00000120136 403 ntBASIC9.06□□□□□ -0.96
Vps54Q5SPW0 Gm9697-201ENSMUST00000147052 997 ntBASIC9.06□□□□□ -0.96
Vps54Q5SPW0 Gm26784-201ENSMUST00000181666 410 ntBASIC9.06□□□□□ -0.96
Vps54Q5SPW0 Gm37273-201ENSMUST00000195132 539 ntTSL 2 BASIC9.06□□□□□ -0.96
Vps54Q5SPW0 Ube2n-ps1-201ENSMUST00000201768 459 ntBASIC9.06□□□□□ -0.96
Vps54Q5SPW0 1700040L08Rik-201ENSMUST00000205011 541 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Vps54Q5SPW0 Pafah1b1-ps2-201ENSMUST00000207209 1223 ntBASIC9.06□□□□□ -0.96
Vps54Q5SPW0 Gm18503-201ENSMUST00000220340 728 ntBASIC9.06□□□□□ -0.96
Vps54Q5SPW0 AC164424.3-201ENSMUST00000220809 148 ntBASIC9.06□□□□□ -0.96
Vps54Q5SPW0 AC166358.8-201ENSMUST00000223288 105 ntBASIC9.06□□□□□ -0.96
Vps54Q5SPW0 AC124739.1-201ENSMUST00000223433 148 ntBASIC9.06□□□□□ -0.96
Vps54Q5SPW0 Hba-a2-201ENSMUST00000093207 554 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Vps54Q5SPW0 Meis1-201ENSMUST00000068264 3196 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Vps54Q5SPW0 Asph-209ENSMUST00000108335 2514 ntTSL 5 BASIC9.06□□□□□ -0.96
Vps54Q5SPW0 Olfr1320-202ENSMUST00000214273 1982 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Vps54Q5SPW0 Gm28867-201ENSMUST00000190194 2166 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Vps54Q5SPW0 Gm16072-201ENSMUST00000119574 2377 ntBASIC9.06□□□□□ -0.96
Vps54Q5SPW0 Gm3203-201ENSMUST00000197670 2389 ntBASIC9.06□□□□□ -0.96
Vps54Q5SPW0 Gbp11-201ENSMUST00000100960 2692 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Vps54Q5SPW0 Cts7-203ENSMUST00000224986 1349 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
Vps54Q5SPW0 Cyp4a30b-201ENSMUST00000119958 1527 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Vps54Q5SPW0 Gm18305-201ENSMUST00000216532 2128 ntBASIC9.05□□□□□ -0.96
Vps54Q5SPW0 Trim40-201ENSMUST00000087158 2117 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
Vps54Q5SPW0 Phlpp2-203ENSMUST00000179721 7846 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Vps54Q5SPW0 Dab2-204ENSMUST00000110664 4450 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
Vps54Q5SPW0 Gm29811-201ENSMUST00000197386 1671 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Vps54Q5SPW0 Cav1-205ENSMUST00000115456 995 ntAPPRIS P1 TSL 2 BASIC9.05□□□□□ -0.96
Vps54Q5SPW0 Gm16221-201ENSMUST00000117331 393 ntBASIC9.05□□□□□ -0.96
Vps54Q5SPW0 Gm14248-201ENSMUST00000117790 544 ntBASIC9.05□□□□□ -0.96
Vps54Q5SPW0 Gm6491-201ENSMUST00000118273 990 ntBASIC9.05□□□□□ -0.96
Vps54Q5SPW0 Mrpl48-ps-201ENSMUST00000121413 636 ntBASIC9.05□□□□□ -0.96
Vps54Q5SPW0 Gm24139-201ENSMUST00000122780 288 ntBASIC9.05□□□□□ -0.96
Vps54Q5SPW0 Gm15788-201ENSMUST00000130123 613 ntTSL 3 BASIC9.05□□□□□ -0.96
Vps54Q5SPW0 Gm12868-201ENSMUST00000143801 417 ntTSL 3 BASIC9.05□□□□□ -0.96
Vps54Q5SPW0 Gm13663-202ENSMUST00000145563 643 ntTSL 5 BASIC9.05□□□□□ -0.96
Vps54Q5SPW0 Rnf170-ps-201ENSMUST00000181188 859 ntBASIC9.05□□□□□ -0.96
Vps54Q5SPW0 Mir6403-201ENSMUST00000185007 129 ntBASIC9.05□□□□□ -0.96
Vps54Q5SPW0 Gm28573-201ENSMUST00000187821 380 ntBASIC9.05□□□□□ -0.96
Vps54Q5SPW0 Gm28145-201ENSMUST00000189742 380 ntBASIC9.05□□□□□ -0.96
Vps54Q5SPW0 Gm28400-201ENSMUST00000191332 380 ntBASIC9.05□□□□□ -0.96
Vps54Q5SPW0 Gm20690-202ENSMUST00000195126 355 ntBASIC9.05□□□□□ -0.96
Vps54Q5SPW0 Gm5547-203ENSMUST00000200182 683 ntTSL 5 BASIC9.05□□□□□ -0.96
Vps54Q5SPW0 Gm4605-201ENSMUST00000203148 625 ntBASIC9.05□□□□□ -0.96
Vps54Q5SPW0 Tial1-214ENSMUST00000205835 562 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Vps54Q5SPW0 Olfr472-202ENSMUST00000210420 1083 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
Vps54Q5SPW0 Gm40552-201ENSMUST00000218233 1258 ntTSL 5 BASIC9.05□□□□□ -0.96
Vps54Q5SPW0 CT009713.5-201ENSMUST00000224508 909 ntBASIC9.05□□□□□ -0.96
Vps54Q5SPW0 AC154487.1-201ENSMUST00000224649 226 ntBASIC9.05□□□□□ -0.96
Vps54Q5SPW0 AC131710.2-201ENSMUST00000226773 683 ntBASIC9.05□□□□□ -0.96
Vps54Q5SPW0 AC125087.1-201ENSMUST00000227552 514 ntBASIC9.05□□□□□ -0.96
Vps54Q5SPW0 Olfr290-201ENSMUST00000073468 948 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
Vps54Q5SPW0 Gm22748-201ENSMUST00000082493 136 ntBASIC9.05□□□□□ -0.96
Vps54Q5SPW0 Wfdc10-201ENSMUST00000094344 459 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Vps54Q5SPW0 Ampd3-208ENSMUST00000213373 3337 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
Vps54Q5SPW0 Tenm4-202ENSMUST00000107165 10930 ntAPPRIS P4 TSL 1 (best) BASIC9.05□□□□□ -0.96
Vps54Q5SPW0 Extl2-203ENSMUST00000106502 2840 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Vps54Q5SPW0 Naalad2-201ENSMUST00000001826 2831 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Vps54Q5SPW0 Unc45b-202ENSMUST00000108160 4152 ntAPPRIS ALT1 TSL 5 BASIC9.05□□□□□ -0.96
Vps54Q5SPW0 Fam216b-201ENSMUST00000066437 2241 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Vps54Q5SPW0 Muc19-202ENSMUST00000160242 9104 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Vps54Q5SPW0 Gm5431-201ENSMUST00000109209 1701 ntTSL 5 BASIC9.05□□□□□ -0.96
Vps54Q5SPW0 Dbhos-201ENSMUST00000150024 4020 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Vps54Q5SPW0 Rufy3-201ENSMUST00000031229 4049 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Vps54Q5SPW0 Rorb-203ENSMUST00000112832 9293 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Vps54Q5SPW0 Pvt1-202ENSMUST00000181416 3319 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Vps54Q5SPW0 Gm31152-201ENSMUST00000210319 2171 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Vps54Q5SPW0 Lrrtm3-201ENSMUST00000105439 3896 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms