Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Tyrp1-202ENSMUST00000102831 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Sf3b2Q3UJB0 Pgr15l-201ENSMUST00000033556 5379 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Sf3b2Q3UJB0 Rps12-ps19-201ENSMUST00000119773 400 ntBASIC10.01□□□□□ -0.81
Sf3b2Q3UJB0 Gm13486-201ENSMUST00000119910 282 ntBASIC10.01□□□□□ -0.81
Sf3b2Q3UJB0 Mgst1-203ENSMUST00000120230 1027 ntAPPRIS P1 TSL 3 BASIC10.01□□□□□ -0.81
Sf3b2Q3UJB0 Mgst1-204ENSMUST00000120302 559 ntAPPRIS P1 TSL 3 BASIC10.01□□□□□ -0.81
Sf3b2Q3UJB0 Cox7c-204ENSMUST00000132233 709 ntTSL 2 BASIC10.01□□□□□ -0.81
Sf3b2Q3UJB0 Gm13840-201ENSMUST00000149608 256 ntTSL 2 BASIC10.01□□□□□ -0.81
Sf3b2Q3UJB0 Gm5656-201ENSMUST00000171020 1096 ntBASIC10.01□□□□□ -0.81
Sf3b2Q3UJB0 Gm20685-201ENSMUST00000176654 489 ntTSL 3 BASIC10.01□□□□□ -0.81
Sf3b2Q3UJB0 Fundc1-205ENSMUST00000177213 1032 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Sf3b2Q3UJB0 Mocs2-217ENSMUST00000184781 1250 ntTSL 5 BASIC10.01□□□□□ -0.81
Sf3b2Q3UJB0 Gm21877-201ENSMUST00000185640 694 ntBASIC10.01□□□□□ -0.81
Sf3b2Q3UJB0 Gm38373-201ENSMUST00000192042 288 ntBASIC10.01□□□□□ -0.81
Sf3b2Q3UJB0 Gm43546-201ENSMUST00000196721 943 ntBASIC10.01□□□□□ -0.81
Sf3b2Q3UJB0 Gm42650-201ENSMUST00000197038 575 ntTSL 2 BASIC10.01□□□□□ -0.81
Sf3b2Q3UJB0 Gm42424-201ENSMUST00000198319 376 ntBASIC10.01□□□□□ -0.81
Sf3b2Q3UJB0 Gm43012-201ENSMUST00000198569 937 ntBASIC10.01□□□□□ -0.81
Sf3b2Q3UJB0 Gpn1-206ENSMUST00000202394 631 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Sf3b2Q3UJB0 Gm42713-201ENSMUST00000202709 945 ntBASIC10.01□□□□□ -0.81
Sf3b2Q3UJB0 Gm45136-201ENSMUST00000205793 943 ntBASIC10.01□□□□□ -0.81
Sf3b2Q3UJB0 Gm45900-201ENSMUST00000211879 409 ntBASIC10.01□□□□□ -0.81
Sf3b2Q3UJB0 1700021G15Rik-201ENSMUST00000217671 528 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Sf3b2Q3UJB0 AC154382.1-201ENSMUST00000220958 1282 ntBASIC10.01□□□□□ -0.81
Sf3b2Q3UJB0 Gm18631-201ENSMUST00000223125 1043 ntBASIC10.01□□□□□ -0.81
Sf3b2Q3UJB0 AC114008.1-201ENSMUST00000226193 937 ntBASIC10.01□□□□□ -0.81
Sf3b2Q3UJB0 Gm24036-201ENSMUST00000082868 156 ntBASIC10.01□□□□□ -0.81
Sf3b2Q3UJB0 Ighv1-13-201ENSMUST00000095364 294 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Sf3b2Q3UJB0 Gm5361-201ENSMUST00000211041 1498 ntBASIC10.01□□□□□ -0.81
Sf3b2Q3UJB0 Vmn1r40-204ENSMUST00000228485 2689 ntBASIC10.01□□□□□ -0.81
Sf3b2Q3UJB0 Alkbh1-209ENSMUST00000162961 3857 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Sf3b2Q3UJB0 Pum1-205ENSMUST00000105992 5058 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Sf3b2Q3UJB0 Nfasc-202ENSMUST00000094569 9739 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Sf3b2Q3UJB0 Gpr83-202ENSMUST00000115624 2937 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Sf3b2Q3UJB0 Zfp148-201ENSMUST00000089677 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Sf3b2Q3UJB0 Epb41l2-202ENSMUST00000092645 4280 ntAPPRIS P2 TSL 5 BASIC10.01□□□□□ -0.81
Sf3b2Q3UJB0 Gm40309-201ENSMUST00000202699 1752 ntBASIC10.01□□□□□ -0.81
Sf3b2Q3UJB0 Olfr282-204ENSMUST00000215320 1573 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Sf3b2Q3UJB0 Mas1-201ENSMUST00000089015 2401 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Sf3b2Q3UJB0 Slc22a26-201ENSMUST00000065634 2007 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
Sf3b2Q3UJB0 Zfp866-201ENSMUST00000131784 2680 ntTSL 1 (best) BASIC10□□□□□ -0.81
Sf3b2Q3UJB0 Hnrnpk-205ENSMUST00000176207 2653 ntTSL 1 (best) BASIC10□□□□□ -0.81
Sf3b2Q3UJB0 Oca2-201ENSMUST00000032633 3132 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Sf3b2Q3UJB0 D7Bwg0826e-201ENSMUST00000208484 3795 ntBASIC10□□□□□ -0.81
Sf3b2Q3UJB0 Plscr2-201ENSMUST00000034932 1874 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Sf3b2Q3UJB0 Wdfy3-207ENSMUST00000212024 10539 ntTSL 5 BASIC10□□□□□ -0.81
Sf3b2Q3UJB0 Abraxas1-203ENSMUST00000117364 1657 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Sf3b2Q3UJB0 C78859-201ENSMUST00000212800 5943 ntBASIC10□□□□□ -0.81
Sf3b2Q3UJB0 Hp1bp3-203ENSMUST00000105825 4618 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Sf3b2Q3UJB0 Gm28068-201ENSMUST00000190861 3503 ntTSL 1 (best) BASIC10□□□□□ -0.81
Sf3b2Q3UJB0 Olfr96-203ENSMUST00000214482 2161 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Sf3b2Q3UJB0 Aebp1-201ENSMUST00000102923 3831 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
Sf3b2Q3UJB0 Gm15217-201ENSMUST00000111826 733 ntAPPRIS P5 TSL 2 BASIC10□□□□□ -0.81
Sf3b2Q3UJB0 Gm17170-201ENSMUST00000112785 316 ntBASIC10□□□□□ -0.81
Sf3b2Q3UJB0 Gm11858-201ENSMUST00000117935 838 ntBASIC10□□□□□ -0.81
Sf3b2Q3UJB0 Gm11928-201ENSMUST00000119323 437 ntBASIC10□□□□□ -0.81
Sf3b2Q3UJB0 Gm12451-201ENSMUST00000121636 633 ntBASIC10□□□□□ -0.81
Sf3b2Q3UJB0 Gm13837-201ENSMUST00000126326 337 ntTSL 3 BASIC10□□□□□ -0.81
Sf3b2Q3UJB0 Mir1983-201ENSMUST00000157523 132 ntBASIC10□□□□□ -0.81
Sf3b2Q3UJB0 Gm5445-201ENSMUST00000180224 480 ntBASIC10□□□□□ -0.81
Sf3b2Q3UJB0 Gm28512-201ENSMUST00000187415 762 ntTSL 3 BASIC10□□□□□ -0.81
Sf3b2Q3UJB0 Gm29066-201ENSMUST00000188502 452 ntTSL 3 BASIC10□□□□□ -0.81
Sf3b2Q3UJB0 Smpx-208ENSMUST00000190091 1087 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Sf3b2Q3UJB0 Gm19087-201ENSMUST00000191430 946 ntBASIC10□□□□□ -0.81
Sf3b2Q3UJB0 Fxyd4-204ENSMUST00000203433 670 ntTSL 3 BASIC10□□□□□ -0.81
Sf3b2Q3UJB0 Olfr181-203ENSMUST00000205742 1104 ntAPPRIS P1 BASIC10□□□□□ -0.81
Sf3b2Q3UJB0 E230029C05Rik-204ENSMUST00000208266 875 ntTSL 1 (best) BASIC10□□□□□ -0.81
Sf3b2Q3UJB0 Gm45446-201ENSMUST00000209348 216 ntBASIC10□□□□□ -0.81
Sf3b2Q3UJB0 Gm19217-201ENSMUST00000218238 328 ntBASIC10□□□□□ -0.81
Sf3b2Q3UJB0 Gm40797-201ENSMUST00000219762 385 ntTSL 2 BASIC10□□□□□ -0.81
Sf3b2Q3UJB0 AC154595.1-201ENSMUST00000225533 1059 ntBASIC10□□□□□ -0.81
Sf3b2Q3UJB0 Gm22504-201ENSMUST00000082963 139 ntBASIC10□□□□□ -0.81
Sf3b2Q3UJB0 2700062C07Rik-201ENSMUST00000097646 1040 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Sf3b2Q3UJB0 Klhl32-203ENSMUST00000108214 5970 ntTSL 5 BASIC10□□□□□ -0.81
Sf3b2Q3UJB0 Exoc4-201ENSMUST00000052266 4824 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Sf3b2Q3UJB0 Gm5386-201ENSMUST00000121749 2450 ntBASIC10□□□□□ -0.81
Sf3b2Q3UJB0 AC121286.2-201ENSMUST00000218069 2470 ntBASIC10□□□□□ -0.81
Sf3b2Q3UJB0 Gm30373-202ENSMUST00000217507 2709 ntTSL 5 BASIC10□□□□□ -0.81
Sf3b2Q3UJB0 Erg-202ENSMUST00000113846 3249 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Sf3b2Q3UJB0 5033425B01Rik-201ENSMUST00000213948 1303 ntBASIC10□□□□□ -0.81
Sf3b2Q3UJB0 Map2-205ENSMUST00000114015 5440 ntTSL 1 (best) BASIC10□□□□□ -0.81
Sf3b2Q3UJB0 Kansl3-204ENSMUST00000185912 4527 ntTSL 1 (best) BASIC10□□□□□ -0.81
Sf3b2Q3UJB0 Ssh2-201ENSMUST00000037912 9178 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Sf3b2Q3UJB0 Pramel-201ENSMUST00000118979 1383 ntBASIC10□□□□□ -0.81
Sf3b2Q3UJB0 Gm45175-201ENSMUST00000208295 1375 ntTSL 5 BASIC10□□□□□ -0.81
Sf3b2Q3UJB0 Tyms-201ENSMUST00000026846 3163 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Sf3b2Q3UJB0 Gm43910-201ENSMUST00000204561 3241 ntBASIC9.99□□□□□ -0.81
Sf3b2Q3UJB0 Gm6710-201ENSMUST00000109011 1445 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Sf3b2Q3UJB0 Dnajc18-201ENSMUST00000025208 5169 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Sf3b2Q3UJB0 Exoc1-202ENSMUST00000087133 3371 ntAPPRIS P4 TSL 1 (best) BASIC9.99□□□□□ -0.81
Sf3b2Q3UJB0 Isy1-201ENSMUST00000089497 5837 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Sf3b2Q3UJB0 Vmn2r114-201ENSMUST00000168033 2571 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Sf3b2Q3UJB0 Scn2b-201ENSMUST00000093855 3958 ntAPPRIS P1 TSL 2 BASIC9.99□□□□□ -0.81
Sf3b2Q3UJB0 Prpf4b-201ENSMUST00000077853 7844 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Sf3b2Q3UJB0 Nol11-201ENSMUST00000018577 3158 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Sf3b2Q3UJB0 Gm44423-201ENSMUST00000203746 3158 ntBASIC9.99□□□□□ -0.81
Sf3b2Q3UJB0 Gm37949-201ENSMUST00000192808 2091 ntBASIC9.99□□□□□ -0.81
Sf3b2Q3UJB0 Gm10388-201ENSMUST00000205001 2936 ntBASIC9.99□□□□□ -0.81
Sf3b2Q3UJB0 Gm16072-201ENSMUST00000119574 2377 ntBASIC9.99□□□□□ -0.81
Sf3b2Q3UJB0 Gm43948-201ENSMUST00000203474 2376 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms