Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 1700018F24Rik-201ENSMUST00000031624 1122 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
P20040 Olfr1449-201ENSMUST00000056005 948 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
P20040 Olfr328-201ENSMUST00000073933 933 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
P20040 Olfr51-201ENSMUST00000076514 924 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
P20040 Gm24143-201ENSMUST00000082633 145 ntBASIC6.75□□□□□ -1.33
P20040 Gm26264-201ENSMUST00000083278 159 ntBASIC6.75□□□□□ -1.33
P20040 Olfr1012-201ENSMUST00000099916 936 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
P20040 Far1-201ENSMUST00000033018 4962 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
P20040 AC153152.1-201ENSMUST00000221105 2742 ntBASIC6.75□□□□□ -1.33
P20040 Fcrl5-204ENSMUST00000193229 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
P20040 AC140409.2-201ENSMUST00000216936 3079 ntTSL 5 BASIC6.75□□□□□ -1.33
P20040 Ugt2b37-201ENSMUST00000075858 1894 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
P20040 3110043O21Rik-201ENSMUST00000084724 3413 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
P20040 Btnl10-202ENSMUST00000069941 4400 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
P20040 AC159195.2-201ENSMUST00000223670 3757 ntBASIC6.74□□□□□ -1.33
P20040 Hmg20a-201ENSMUST00000034879 3778 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
P20040 Lrrc18-201ENSMUST00000038956 2587 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
P20040 Zfp27-206ENSMUST00000172448 2460 ntAPPRIS P1 TSL 3 BASIC6.74□□□□□ -1.33
P20040 Mbd5-202ENSMUST00000112745 6037 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
P20040 Tex14-201ENSMUST00000060835 4763 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
P20040 Evi2a-205ENSMUST00000170799 2289 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
P20040 Plp1-201ENSMUST00000033800 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
P20040 AC151984.1-201ENSMUST00000218261 2976 ntBASIC6.74□□□□□ -1.33
P20040 Gm44834-201ENSMUST00000206671 1396 ntBASIC6.74□□□□□ -1.33
P20040 Serpina1d-201ENSMUST00000078869 1394 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
P20040 Slc37a3-201ENSMUST00000090243 4030 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
P20040 Gm39566-201ENSMUST00000210714 3908 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
P20040 Nppb-201ENSMUST00000103231 781 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
P20040 Ighv11-2-201ENSMUST00000103468 461 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
P20040 Homer1-210ENSMUST00000109497 779 ntTSL 5 BASIC6.74□□□□□ -1.33
P20040 Homer1-211ENSMUST00000109498 815 ntTSL 5 BASIC6.74□□□□□ -1.33
P20040 Gm5761-201ENSMUST00000119238 834 ntBASIC6.74□□□□□ -1.33
P20040 Gm5931-201ENSMUST00000121308 477 ntBASIC6.74□□□□□ -1.33
P20040 A630023P12Rik-202ENSMUST00000141420 495 ntTSL 2 BASIC6.74□□□□□ -1.33
P20040 A230072E10Rik-201ENSMUST00000146161 676 ntTSL 5 BASIC6.74□□□□□ -1.33
P20040 Gm24994-201ENSMUST00000157414 121 ntBASIC6.74□□□□□ -1.33
P20040 Dctd-206ENSMUST00000174379 381 ntTSL 3 BASIC6.74□□□□□ -1.33
P20040 Gm26197-201ENSMUST00000175033 115 ntBASIC6.74□□□□□ -1.33
P20040 Gm26505-201ENSMUST00000176208 166 ntBASIC6.74□□□□□ -1.33
P20040 Gm20617-201ENSMUST00000177082 717 ntTSL 3 BASIC6.74□□□□□ -1.33
P20040 Gm28980-201ENSMUST00000187877 219 ntBASIC6.74□□□□□ -1.33
P20040 Gm28546-201ENSMUST00000188221 615 ntBASIC6.74□□□□□ -1.33
P20040 Gm29126-201ENSMUST00000188686 151 ntBASIC6.74□□□□□ -1.33
P20040 Gm29145-201ENSMUST00000189914 456 ntBASIC6.74□□□□□ -1.33
P20040 Gm38087-201ENSMUST00000193653 265 ntTSL 5 BASIC6.74□□□□□ -1.33
P20040 Gm38047-201ENSMUST00000193690 1133 ntBASIC6.74□□□□□ -1.33
P20040 Gm43699-201ENSMUST00000201312 818 ntTSL 3 BASIC6.74□□□□□ -1.33
P20040 Gm45202-201ENSMUST00000205955 332 ntTSL 3 BASIC6.74□□□□□ -1.33
P20040 Gm18943-201ENSMUST00000207357 1216 ntBASIC6.74□□□□□ -1.33
P20040 Gm44743-201ENSMUST00000209062 386 ntBASIC6.74□□□□□ -1.33
P20040 Gm32486-201ENSMUST00000209810 3816 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
P20040 Gm6909-201ENSMUST00000209825 989 ntBASIC6.74□□□□□ -1.33
P20040 Gm8575-201ENSMUST00000210262 521 ntBASIC6.74□□□□□ -1.33
P20040 Gm45391-201ENSMUST00000211563 576 ntTSL 5 BASIC6.74□□□□□ -1.33
P20040 AC155259.1-201ENSMUST00000214794 477 ntBASIC6.74□□□□□ -1.33
P20040 Gm5948-201ENSMUST00000219627 839 ntBASIC6.74□□□□□ -1.33
P20040 Gm4804-203ENSMUST00000222542 577 ntTSL 3 BASIC6.74□□□□□ -1.33
P20040 AC241621.1-201ENSMUST00000224499 430 ntBASIC6.74□□□□□ -1.33
P20040 Hpf1-201ENSMUST00000037190 1191 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
P20040 Olfr139-201ENSMUST00000050678 948 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
P20040 Tex47-201ENSMUST00000088796 1085 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
P20040 Olfr1259-201ENSMUST00000090695 930 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
P20040 Usp8-202ENSMUST00000110416 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
P20040 D030045P18Rik-201ENSMUST00000213245 1892 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
P20040 Vmn1r44-204ENSMUST00000226171 1877 ntBASIC6.74□□□□□ -1.33
P20040 Olfr1115-203ENSMUST00000214119 2455 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
P20040 Rlim-201ENSMUST00000070705 7429 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
P20040 Mcf2l-205ENSMUST00000110871 3401 ntTSL 5 BASIC6.74□□□□□ -1.33
P20040 Mpzl3-203ENSMUST00000114664 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
P20040 Gm3883-201ENSMUST00000098119 3229 ntBASIC6.74□□□□□ -1.33
P20040 Olfr115-202ENSMUST00000221552 2295 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
P20040 Olfr115-203ENSMUST00000223366 2273 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
P20040 Casp8-202ENSMUST00000165549 1917 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
P20040 Mms19-217ENSMUST00000171561 6607 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
P20040 Gm5605-201ENSMUST00000208940 1305 ntBASIC6.74□□□□□ -1.33
P20040 Nipsnap3a-202ENSMUST00000107666 1553 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
P20040 Usp7-207ENSMUST00000160405 4745 ntTSL 5 BASIC6.74□□□□□ -1.33
P20040 Coro2a-201ENSMUST00000030021 4112 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
P20040 Lrp2-201ENSMUST00000080953 15460 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
P20040 Slc25a53-202ENSMUST00000113069 3189 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
P20040 Ftx-203ENSMUST00000130063 4275 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
P20040 Prom1-201ENSMUST00000030973 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
P20040 Kat6a-201ENSMUST00000044331 9113 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
P20040 Ogdh-203ENSMUST00000093350 4075 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
P20040 Gm43398-201ENSMUST00000196584 2742 ntBASIC6.73□□□□□ -1.33
P20040 Pde4b-204ENSMUST00000106901 2129 ntTSL 2 BASIC6.73□□□□□ -1.33
P20040 9030607J07Rik-201ENSMUST00000202228 1622 ntBASIC6.73□□□□□ -1.33
P20040 Ddx19b-201ENSMUST00000040241 6612 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
P20040 Itga1-201ENSMUST00000061673 10967 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
P20040 Gm6011-201ENSMUST00000211736 1796 ntBASIC6.73□□□□□ -1.33
P20040 Nt5c1b-220ENSMUST00000223534 1798 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
P20040 Selp-205ENSMUST00000162746 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
P20040 Fmo4-202ENSMUST00000111525 2683 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
P20040 Znhit3-201ENSMUST00000103195 998 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
P20040 Gm13929-201ENSMUST00000117553 1125 ntBASIC6.73□□□□□ -1.33
P20040 Gm14519-201ENSMUST00000118490 312 ntBASIC6.73□□□□□ -1.33
P20040 Fau-ps2-201ENSMUST00000119333 371 ntBASIC6.73□□□□□ -1.33
P20040 Gm15836-201ENSMUST00000119952 793 ntBASIC6.73□□□□□ -1.33
P20040 Rpl9-ps2-201ENSMUST00000120821 577 ntBASIC6.73□□□□□ -1.33
P20040 Gm15079-201ENSMUST00000121943 216 ntBASIC6.73□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms