Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Zzz3-203ENSMUST00000106101 7539 ntAPPRIS P3 TSL 5 BASIC11.65□□□□□ -0.54
NclP09405 Gm20609-201ENSMUST00000177104 1527 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
NclP09405 Gm37739-201ENSMUST00000191742 1505 ntTSL 5 BASIC11.65□□□□□ -0.55
NclP09405 Gm38003-201ENSMUST00000191968 1504 ntTSL 5 BASIC11.65□□□□□ -0.55
NclP09405 Gatad2b-203ENSMUST00000197988 1815 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
NclP09405 Gykl1-201ENSMUST00000066193 1990 ntAPPRIS P1 BASIC11.65□□□□□ -0.55
NclP09405 Yes1-202ENSMUST00000168707 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
NclP09405 Birc5-202ENSMUST00000093906 3334 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
NclP09405 Setd5-203ENSMUST00000113157 6527 ntTSL 5 BASIC11.64□□□□□ -0.55
NclP09405 Gm37066-201ENSMUST00000192713 2061 ntBASIC11.64□□□□□ -0.55
NclP09405 5430420F09Rik-201ENSMUST00000194956 1799 ntBASIC11.64□□□□□ -0.55
NclP09405 Jakmip2-201ENSMUST00000082254 3511 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
NclP09405 Gas2l3-201ENSMUST00000099374 6748 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
NclP09405 Nrf1-204ENSMUST00000115199 2296 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
NclP09405 Pld1-202ENSMUST00000120834 4849 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
NclP09405 Tsc22d1-205ENSMUST00000133224 786 ntTSL 2 BASIC11.64□□□□□ -0.55
NclP09405 4930439A04Rik-201ENSMUST00000137241 739 ntTSL 3 BASIC11.64□□□□□ -0.55
NclP09405 Gm11816-202ENSMUST00000149848 714 ntTSL 2 BASIC11.64□□□□□ -0.55
NclP09405 Gm22948-201ENSMUST00000158561 243 ntBASIC11.64□□□□□ -0.55
NclP09405 Tph1-205ENSMUST00000168335 578 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
NclP09405 Obox1-205ENSMUST00000173443 835 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
NclP09405 Obox2-204ENSMUST00000174305 834 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
NclP09405 Gm5181-201ENSMUST00000183140 971 ntBASIC11.64□□□□□ -0.55
NclP09405 Mir7005-201ENSMUST00000185089 69 ntBASIC11.64□□□□□ -0.55
NclP09405 4930599N24Rik-201ENSMUST00000198822 1003 ntBASIC11.64□□□□□ -0.55
NclP09405 Gm19039-201ENSMUST00000204363 575 ntBASIC11.64□□□□□ -0.55
NclP09405 RMST_1.1-203ENSMUST00000217866 775 ntTSL 3 BASIC11.64□□□□□ -0.55
NclP09405 Zfp874a-208ENSMUST00000225479 1092 ntBASIC11.64□□□□□ -0.55
NclP09405 AC174797.4-201ENSMUST00000225510 347 ntBASIC11.64□□□□□ -0.55
NclP09405 AC154649.2-201ENSMUST00000228189 808 ntBASIC11.64□□□□□ -0.55
NclP09405 Rbp7-201ENSMUST00000030848 619 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
NclP09405 Odf3l1-201ENSMUST00000055036 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
NclP09405 Olfr350-201ENSMUST00000055130 939 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
NclP09405 F630040K05Rik-201ENSMUST00000180519 2841 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
NclP09405 Sox2ot-215ENSMUST00000199171 3486 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
NclP09405 Gfral-201ENSMUST00000074880 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
NclP09405 Pgbd1-205ENSMUST00000151743 2642 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
NclP09405 Vmn1r51-204ENSMUST00000226977 4357 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
NclP09405 Gm38147-201ENSMUST00000192397 1798 ntBASIC11.64□□□□□ -0.55
NclP09405 Olfr1157-201ENSMUST00000099841 4621 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
NclP09405 Nrep-203ENSMUST00000171533 2156 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
NclP09405 EU599041-203ENSMUST00000205748 1492 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
NclP09405 B230118H07Rik-203ENSMUST00000111231 2273 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
NclP09405 Gm4894-202ENSMUST00000216428 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
NclP09405 Zzz3-202ENSMUST00000106100 7607 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
NclP09405 Gm36938-201ENSMUST00000191612 2696 ntBASIC11.63□□□□□ -0.55
NclP09405 Gm37978-201ENSMUST00000194736 2915 ntBASIC11.63□□□□□ -0.55
NclP09405 Ube3c-204ENSMUST00000199032 3171 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
NclP09405 Tnni3k-201ENSMUST00000064076 3034 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
NclP09405 Gm5386-201ENSMUST00000121749 2450 ntBASIC11.63□□□□□ -0.55
NclP09405 Proz-201ENSMUST00000033822 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
NclP09405 Adam3-201ENSMUST00000033958 2743 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
NclP09405 Pfkfb3-201ENSMUST00000028114 4712 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
NclP09405 Gm22439-201ENSMUST00000104048 132 ntBASIC11.63□□□□□ -0.55
NclP09405 Gm24284-201ENSMUST00000104240 142 ntBASIC11.63□□□□□ -0.55
NclP09405 Cisd3-202ENSMUST00000107584 546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
NclP09405 Gm10999-201ENSMUST00000108743 207 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
NclP09405 Gm12788-201ENSMUST00000119090 308 ntBASIC11.63□□□□□ -0.55
NclP09405 Gm13252-201ENSMUST00000119355 321 ntBASIC11.63□□□□□ -0.55
NclP09405 Babam2-205ENSMUST00000131995 1220 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
NclP09405 Gm12111-201ENSMUST00000150073 349 ntTSL 3 BASIC11.63□□□□□ -0.55
NclP09405 Fbxl12-210ENSMUST00000155301 476 ntTSL 3 BASIC11.63□□□□□ -0.55
NclP09405 Gm9141-201ENSMUST00000159355 1007 ntBASIC11.63□□□□□ -0.55
NclP09405 5330439A09Rik-201ENSMUST00000162770 1117 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
NclP09405 Gm28221-201ENSMUST00000185617 347 ntTSL 5 BASIC11.63□□□□□ -0.55
NclP09405 Gm5835-201ENSMUST00000185806 1270 ntBASIC11.63□□□□□ -0.55
NclP09405 4933417E11Rik-201ENSMUST00000188213 1093 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
NclP09405 Gm29144-201ENSMUST00000189235 339 ntBASIC11.63□□□□□ -0.55
NclP09405 Gm29238-201ENSMUST00000189709 695 ntBASIC11.63□□□□□ -0.55
NclP09405 Gm3489-201ENSMUST00000190083 528 ntBASIC11.63□□□□□ -0.55
NclP09405 Gm28607-201ENSMUST00000190142 339 ntBASIC11.63□□□□□ -0.55
NclP09405 Gm28121-201ENSMUST00000191420 339 ntBASIC11.63□□□□□ -0.55
NclP09405 Gm37469-201ENSMUST00000193728 890 ntBASIC11.63□□□□□ -0.55
NclP09405 Gm45145-203ENSMUST00000208872 958 ntTSL 5 BASIC11.63□□□□□ -0.55
NclP09405 Gm45259-201ENSMUST00000209217 1006 ntBASIC11.63□□□□□ -0.55
NclP09405 2700097O09Rik-201ENSMUST00000021406 1105 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
NclP09405 Gm18899-201ENSMUST00000217663 546 ntBASIC11.63□□□□□ -0.55
NclP09405 AC153529.1-201ENSMUST00000217818 370 ntBASIC11.63□□□□□ -0.55
NclP09405 Gm20063-201ENSMUST00000220757 1089 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
NclP09405 AC159205.1-201ENSMUST00000225513 1099 ntBASIC11.63□□□□□ -0.55
NclP09405 Grxcr1-201ENSMUST00000094715 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
NclP09405 Gm10770-201ENSMUST00000099418 714 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
NclP09405 Gm43623-201ENSMUST00000199289 2663 ntBASIC11.63□□□□□ -0.55
NclP09405 Cfl2-201ENSMUST00000078124 2940 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
NclP09405 AC112265.1-201ENSMUST00000213522 1501 ntTSL 5 BASIC11.63□□□□□ -0.55
NclP09405 Olfr319-203ENSMUST00000215962 2500 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
NclP09405 Uvssa-204ENSMUST00000202816 7165 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
NclP09405 Mme-201ENSMUST00000029400 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
NclP09405 Rnf141-209ENSMUST00000177236 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
NclP09405 Trpv1-202ENSMUST00000102526 3361 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
NclP09405 Kyat3-202ENSMUST00000106218 1888 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
NclP09405 Celf5-204ENSMUST00000120856 3861 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
NclP09405 Csnk1g1-204ENSMUST00000130798 1648 ntTSL 5 BASIC11.63□□□□□ -0.55
NclP09405 Greb1-212ENSMUST00000162112 8058 ntAPPRIS P3 TSL 5 BASIC11.63□□□□□ -0.55
NclP09405 Rorb-203ENSMUST00000112832 9293 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
NclP09405 Gm17575-201ENSMUST00000180437 1991 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
NclP09405 Ranbp9-208ENSMUST00000222651 1951 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
NclP09405 Trim2-202ENSMUST00000065380 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
NclP09405 Zhx3-202ENSMUST00000103112 9109 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
NclP09405 Ehhadh-201ENSMUST00000023559 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms