Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Defa-ps3-201ENSMUST00000142705 282 ntBASIC8.55□□□□□ -1.04
Ccdc38Q8CDN8 Gm14642-201ENSMUST00000147357 470 ntTSL 3 BASIC8.55□□□□□ -1.04
Ccdc38Q8CDN8 Gm20617-201ENSMUST00000177082 717 ntTSL 3 BASIC8.55□□□□□ -1.04
Ccdc38Q8CDN8 Trav9d-2-201ENSMUST00000178824 337 ntAPPRIS ALT2 BASIC8.55□□□□□ -1.04
Ccdc38Q8CDN8 Trav9n-2-201ENSMUST00000180097 337 ntAPPRIS ALT2 BASIC8.55□□□□□ -1.04
Ccdc38Q8CDN8 Gm6098-201ENSMUST00000180234 330 ntBASIC8.55□□□□□ -1.04
Ccdc38Q8CDN8 Gm19705-204ENSMUST00000181524 413 ntTSL 2 BASIC8.55□□□□□ -1.04
Ccdc38Q8CDN8 Gm28983-201ENSMUST00000186685 614 ntBASIC8.55□□□□□ -1.04
Ccdc38Q8CDN8 Gm28150-201ENSMUST00000187305 614 ntBASIC8.55□□□□□ -1.04
Ccdc38Q8CDN8 Gm28377-201ENSMUST00000189695 720 ntBASIC8.55□□□□□ -1.04
Ccdc38Q8CDN8 Gm35025-202ENSMUST00000193114 455 ntTSL 3 BASIC8.55□□□□□ -1.04
Ccdc38Q8CDN8 Gm45283-201ENSMUST00000210593 628 ntBASIC8.55□□□□□ -1.04
Ccdc38Q8CDN8 Gm4120-201ENSMUST00000220456 578 ntBASIC8.55□□□□□ -1.04
Ccdc38Q8CDN8 AC131745.3-201ENSMUST00000223582 554 ntBASIC8.55□□□□□ -1.04
Ccdc38Q8CDN8 FAM237A-201ENSMUST00000226288 1105 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Ccdc38Q8CDN8 Tmem225-201ENSMUST00000046333 993 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Ccdc38Q8CDN8 Cst13-201ENSMUST00000046589 783 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Ccdc38Q8CDN8 Fate1-201ENSMUST00000066116 938 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Ccdc38Q8CDN8 Gm10015-201ENSMUST00000072570 465 ntBASIC8.55□□□□□ -1.04
Ccdc38Q8CDN8 Glipr1-201ENSMUST00000074805 1081 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Ccdc38Q8CDN8 Fgf2-202ENSMUST00000091203 535 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Ccdc38Q8CDN8 Slc6a19-201ENSMUST00000022048 3936 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Ccdc38Q8CDN8 AF366264-201ENSMUST00000071308 3157 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Ccdc38Q8CDN8 Gm17083-201ENSMUST00000165849 1366 ntBASIC8.55□□□□□ -1.04
Ccdc38Q8CDN8 Phf11a-201ENSMUST00000062307 1354 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Ccdc38Q8CDN8 Gm37080-201ENSMUST00000194804 2404 ntBASIC8.55□□□□□ -1.04
Ccdc38Q8CDN8 Glcci1-202ENSMUST00000161217 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Ccdc38Q8CDN8 Nxt2-204ENSMUST00000112916 2532 ntTSL 3 BASIC8.55□□□□□ -1.04
Ccdc38Q8CDN8 Gm14002-201ENSMUST00000123574 2839 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Ccdc38Q8CDN8 Gm19028-201ENSMUST00000189614 1873 ntBASIC8.55□□□□□ -1.04
Ccdc38Q8CDN8 Nlrc5-201ENSMUST00000053085 6945 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Ccdc38Q8CDN8 Gm43571-201ENSMUST00000200067 3098 ntBASIC8.55□□□□□ -1.04
Ccdc38Q8CDN8 Kif20a-202ENSMUST00000167161 3565 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Ccdc38Q8CDN8 4921528I07Rik-202ENSMUST00000213446 3798 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Ccdc38Q8CDN8 Gm15624-201ENSMUST00000145420 1405 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Ccdc38Q8CDN8 Cpvl-203ENSMUST00000204674 1511 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Ccdc38Q8CDN8 Nwd1-209ENSMUST00000228312 10789 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Ccdc38Q8CDN8 Acsl4-202ENSMUST00000112903 4956 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Ccdc38Q8CDN8 Acsl4-203ENSMUST00000112904 4959 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Ccdc38Q8CDN8 Gc-201ENSMUST00000049209 1801 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Ccdc38Q8CDN8 Smc1b-201ENSMUST00000023068 4047 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Ccdc38Q8CDN8 Mxi1-203ENSMUST00000111737 4843 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Ccdc38Q8CDN8 Clasp1-212ENSMUST00000189262 6918 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
Ccdc38Q8CDN8 Phlpp2-201ENSMUST00000034175 7839 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Ccdc38Q8CDN8 Fbxl5-203ENSMUST00000114047 2762 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Ccdc38Q8CDN8 Gm12532-201ENSMUST00000148448 2684 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Ccdc38Q8CDN8 D830032E09Rik-201ENSMUST00000186875 2193 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Ccdc38Q8CDN8 Gm6101-201ENSMUST00000195384 1867 ntBASIC8.54□□□□□ -1.04
Ccdc38Q8CDN8 Zfp870-201ENSMUST00000178401 5126 ntTSL 5 BASIC8.54□□□□□ -1.04
Ccdc38Q8CDN8 Gm44141-201ENSMUST00000204231 1583 ntBASIC8.54□□□□□ -1.04
Ccdc38Q8CDN8 Glce-201ENSMUST00000034785 4626 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Ccdc38Q8CDN8 Gm22150-201ENSMUST00000104447 135 ntBASIC8.54□□□□□ -1.04
Ccdc38Q8CDN8 Rnf170-203ENSMUST00000110575 966 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Ccdc38Q8CDN8 Gm13160-201ENSMUST00000118441 627 ntBASIC8.54□□□□□ -1.04
Ccdc38Q8CDN8 Gm23187-201ENSMUST00000175746 86 ntBASIC8.54□□□□□ -1.04
Ccdc38Q8CDN8 Gm6799-201ENSMUST00000186919 573 ntBASIC8.54□□□□□ -1.04
Ccdc38Q8CDN8 Ly6e-208ENSMUST00000188042 714 ntAPPRIS P1 TSL 3 BASIC8.54□□□□□ -1.04
Ccdc38Q8CDN8 Gm7369-201ENSMUST00000192738 936 ntBASIC8.54□□□□□ -1.04
Ccdc38Q8CDN8 Gm27680-202ENSMUST00000199221 807 ntBASIC8.54□□□□□ -1.04
Ccdc38Q8CDN8 Tmigd3-206ENSMUST00000199977 838 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Ccdc38Q8CDN8 AC132474.3-201ENSMUST00000213244 383 ntTSL 5 BASIC8.54□□□□□ -1.04
Ccdc38Q8CDN8 Gm2915-201ENSMUST00000222565 787 ntBASIC8.54□□□□□ -1.04
Ccdc38Q8CDN8 AC107663.2-201ENSMUST00000225534 1234 ntBASIC8.54□□□□□ -1.04
Ccdc38Q8CDN8 Asb12-201ENSMUST00000033549 1258 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Ccdc38Q8CDN8 Olfr1012-201ENSMUST00000099916 936 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Ccdc38Q8CDN8 Kif24-202ENSMUST00000108055 5593 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Ccdc38Q8CDN8 Ncor1-204ENSMUST00000101066 8852 ntAPPRIS P2 TSL 5 BASIC8.54□□□□□ -1.04
Ccdc38Q8CDN8 Gm36011-201ENSMUST00000208671 2719 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Ccdc38Q8CDN8 Nasp-201ENSMUST00000030456 2520 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Ccdc38Q8CDN8 Ect2-207ENSMUST00000176242 3985 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Ccdc38Q8CDN8 Ivd-201ENSMUST00000028807 3665 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Ccdc38Q8CDN8 Adgrg6-203ENSMUST00000208429 3582 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
Ccdc38Q8CDN8 Marf1-201ENSMUST00000090300 7765 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Ccdc38Q8CDN8 Synj2-206ENSMUST00000115787 4013 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Ccdc38Q8CDN8 Sec24a-201ENSMUST00000038210 3800 ntAPPRIS ALT2 TSL 2 BASIC8.54□□□□□ -1.04
Ccdc38Q8CDN8 Gm18508-201ENSMUST00000215790 1642 ntBASIC8.54□□□□□ -1.04
Ccdc38Q8CDN8 3732407C23Rik-201ENSMUST00000222770 3540 ntBASIC8.54□□□□□ -1.04
Ccdc38Q8CDN8 Gm37968-201ENSMUST00000195131 3201 ntBASIC8.54□□□□□ -1.04
Ccdc38Q8CDN8 Cep97-201ENSMUST00000023270 7911 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Ccdc38Q8CDN8 Olfr1432-202ENSMUST00000207710 2068 ntAPPRIS P5 TSL 5 BASIC8.53□□□□□ -1.04
Ccdc38Q8CDN8 Gm10706-201ENSMUST00000128327 1960 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Ccdc38Q8CDN8 Gm37310-201ENSMUST00000195237 2968 ntBASIC8.53□□□□□ -1.04
Ccdc38Q8CDN8 Siae-204ENSMUST00000215474 4947 ntAPPRIS P2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Ccdc38Q8CDN8 4931406P16Rik-210ENSMUST00000206399 4158 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Ccdc38Q8CDN8 Ermard-204ENSMUST00000097395 1593 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
Ccdc38Q8CDN8 Gm10440-201ENSMUST00000197424 2753 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Ccdc38Q8CDN8 Ankrd49-206ENSMUST00000216372 2679 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Ccdc38Q8CDN8 Gm26766-201ENSMUST00000181411 3677 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Ccdc38Q8CDN8 Gm42771-201ENSMUST00000198342 2486 ntBASIC8.53□□□□□ -1.04
Ccdc38Q8CDN8 Ccdc66-201ENSMUST00000050480 2457 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Ccdc38Q8CDN8 Cntn1-204ENSMUST00000169825 5671 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Ccdc38Q8CDN8 Olfr1324-202ENSMUST00000215270 5679 ntAPPRIS ALT2 TSL 2 BASIC8.53□□□□□ -1.04
Ccdc38Q8CDN8 Slc22a6-201ENSMUST00000010250 4026 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Ccdc38Q8CDN8 Mmp3-201ENSMUST00000034497 1801 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Ccdc38Q8CDN8 Hibch-201ENSMUST00000044478 1830 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Ccdc38Q8CDN8 Gm23358-201ENSMUST00000103887 110 ntBASIC8.53□□□□□ -1.04
Ccdc38Q8CDN8 Dtwd1-201ENSMUST00000110437 1276 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Ccdc38Q8CDN8 Gm13352-201ENSMUST00000117515 262 ntBASIC8.53□□□□□ -1.04
Ccdc38Q8CDN8 Gm12634-201ENSMUST00000122157 992 ntBASIC8.53□□□□□ -1.04
Ccdc38Q8CDN8 Pfn2-204ENSMUST00000122210 810 ntTSL 3 BASIC8.53□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms