Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Cd44-205ENSMUST00000111191 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ccdc60Q8C4J0 Asph-209ENSMUST00000108335 2514 ntTSL 5 BASIC9.64□□□□□ -0.87
Ccdc60Q8C4J0 Gpm6b-202ENSMUST00000112223 4764 ntAPPRIS ALT1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ccdc60Q8C4J0 Olfr54-203ENSMUST00000217480 5048 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Ccdc60Q8C4J0 Ehbp1-207ENSMUST00000180360 4971 ntAPPRIS P3 TSL 5 BASIC9.64□□□□□ -0.87
Ccdc60Q8C4J0 Usp40-204ENSMUST00000187758 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ccdc60Q8C4J0 Zfp946-201ENSMUST00000088763 2935 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ccdc60Q8C4J0 Gm2762-207ENSMUST00000202739 2665 ntBASIC9.64□□□□□ -0.87
Ccdc60Q8C4J0 2610028E06Rik-205ENSMUST00000156350 3623 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Ccdc60Q8C4J0 Olfr460-202ENSMUST00000216942 3370 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Ccdc60Q8C4J0 Tmem35a-201ENSMUST00000037687 1918 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ccdc60Q8C4J0 Slfn9-201ENSMUST00000038211 5769 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ccdc60Q8C4J0 Zhx3-202ENSMUST00000103112 9109 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ccdc60Q8C4J0 Gm7982-201ENSMUST00000101011 1443 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Ccdc60Q8C4J0 Gm6351-201ENSMUST00000101021 1443 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Ccdc60Q8C4J0 Gm7682-201ENSMUST00000098289 1443 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Ccdc60Q8C4J0 Ikbkg-217ENSMUST00000164101 6788 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Ccdc60Q8C4J0 Ikbkg-218ENSMUST00000180230 6785 ntAPPRIS P3 TSL 5 BASIC9.64□□□□□ -0.87
Ccdc60Q8C4J0 Gm45904-201ENSMUST00000213082 2330 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Ccdc60Q8C4J0 Olfr1441-202ENSMUST00000214153 2078 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Ccdc60Q8C4J0 A730036I17Rik-201ENSMUST00000143346 3431 ntTSL 2 BASIC9.63□□□□□ -0.87
Ccdc60Q8C4J0 Gm18957-201ENSMUST00000197623 1813 ntBASIC9.63□□□□□ -0.87
Ccdc60Q8C4J0 5330413P13Rik-202ENSMUST00000143453 3630 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Ccdc60Q8C4J0 Ube4a-204ENSMUST00000138559 3374 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Ccdc60Q8C4J0 Prkaa1-202ENSMUST00000228218 4618 ntBASIC9.63□□□□□ -0.87
Ccdc60Q8C4J0 Kdm4c-201ENSMUST00000030102 4196 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Ccdc60Q8C4J0 Epha4-201ENSMUST00000027451 6328 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Ccdc60Q8C4J0 Ptgfr-202ENSMUST00000106126 1535 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Ccdc60Q8C4J0 Ccdc80-202ENSMUST00000099498 3671 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Ccdc60Q8C4J0 Tnfaip6-201ENSMUST00000065927 1710 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Ccdc60Q8C4J0 9930111J21Rik1-202ENSMUST00000097494 3863 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Ccdc60Q8C4J0 Gm2065-201ENSMUST00000194697 2757 ntBASIC9.63□□□□□ -0.87
Ccdc60Q8C4J0 Gm12219-201ENSMUST00000119198 443 ntBASIC9.63□□□□□ -0.87
Ccdc60Q8C4J0 Gm15736-201ENSMUST00000141710 420 ntTSL 3 BASIC9.63□□□□□ -0.87
Ccdc60Q8C4J0 Gm15392-201ENSMUST00000152863 778 ntTSL 3 BASIC9.63□□□□□ -0.87
Ccdc60Q8C4J0 9130230L23Rik-201ENSMUST00000165250 492 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Ccdc60Q8C4J0 Gm28983-201ENSMUST00000186685 614 ntBASIC9.63□□□□□ -0.87
Ccdc60Q8C4J0 Gm28150-201ENSMUST00000187305 614 ntBASIC9.63□□□□□ -0.87
Ccdc60Q8C4J0 Gm28377-201ENSMUST00000189695 720 ntBASIC9.63□□□□□ -0.87
Ccdc60Q8C4J0 Gm37729-201ENSMUST00000194761 1172 ntBASIC9.63□□□□□ -0.87
Ccdc60Q8C4J0 1700021F02Rik-201ENSMUST00000197576 350 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Ccdc60Q8C4J0 1700094M24Rik-201ENSMUST00000203771 665 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Ccdc60Q8C4J0 Hba-x-201ENSMUST00000020531 801 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Ccdc60Q8C4J0 4930579P08Rik-201ENSMUST00000218193 1227 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Ccdc60Q8C4J0 AC164424.3-201ENSMUST00000220809 148 ntBASIC9.63□□□□□ -0.87
Ccdc60Q8C4J0 AC166358.8-201ENSMUST00000223288 105 ntBASIC9.63□□□□□ -0.87
Ccdc60Q8C4J0 AC124739.1-201ENSMUST00000223433 148 ntBASIC9.63□□□□□ -0.87
Ccdc60Q8C4J0 Tas2r116-201ENSMUST00000032315 918 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Ccdc60Q8C4J0 Commd3-201ENSMUST00000061158 935 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Ccdc60Q8C4J0 Zfp120-202ENSMUST00000094538 1245 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Ccdc60Q8C4J0 Gm17199-201ENSMUST00000097296 416 ntBASIC9.63□□□□□ -0.87
Ccdc60Q8C4J0 Osbpl3-202ENSMUST00000090019 4039 ntAPPRIS ALT1 TSL 5 BASIC9.63□□□□□ -0.87
Ccdc60Q8C4J0 4930512H18Rik-201ENSMUST00000133752 1493 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Ccdc60Q8C4J0 Amot-201ENSMUST00000112835 6519 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Ccdc60Q8C4J0 Gm43422-201ENSMUST00000199780 3571 ntBASIC9.63□□□□□ -0.87
Ccdc60Q8C4J0 CR974429.2-201ENSMUST00000221883 1696 ntBASIC9.63□□□□□ -0.87
Ccdc60Q8C4J0 Gm42866-201ENSMUST00000195919 3304 ntBASIC9.63□□□□□ -0.87
Ccdc60Q8C4J0 Gm26720-201ENSMUST00000181260 3538 ntTSL 5 BASIC9.63□□□□□ -0.87
Ccdc60Q8C4J0 Dcaf1-201ENSMUST00000055009 4967 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Ccdc60Q8C4J0 8030451A03Rik-203ENSMUST00000141428 2618 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Ccdc60Q8C4J0 Olfr1198-203ENSMUST00000215529 3413 ntAPPRIS P1 TSL 3 BASIC9.63□□□□□ -0.87
Ccdc60Q8C4J0 Myof-211ENSMUST00000226068 6633 ntAPPRIS ALT2 BASIC9.62□□□□□ -0.87
Ccdc60Q8C4J0 Gm45537-201ENSMUST00000211539 2708 ntBASIC9.62□□□□□ -0.87
Ccdc60Q8C4J0 Nasp-201ENSMUST00000030456 2520 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Ccdc60Q8C4J0 Trim66-203ENSMUST00000106741 4417 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ccdc60Q8C4J0 9430034N14Rik-201ENSMUST00000193532 3785 ntBASIC9.62□□□□□ -0.87
Ccdc60Q8C4J0 Zfp14-202ENSMUST00000207072 2835 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ccdc60Q8C4J0 Gm11855-201ENSMUST00000121562 1869 ntBASIC9.62□□□□□ -0.87
Ccdc60Q8C4J0 Pclo-202ENSMUST00000182407 16846 ntTSL 5 BASIC9.62□□□□□ -0.87
Ccdc60Q8C4J0 Zfp882-201ENSMUST00000110002 3152 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ccdc60Q8C4J0 Zc4h2-201ENSMUST00000044382 2219 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ccdc60Q8C4J0 Marf1-201ENSMUST00000090300 7765 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Ccdc60Q8C4J0 4921504E06Rik-201ENSMUST00000062060 2008 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ccdc60Q8C4J0 Uvssa-204ENSMUST00000202816 7165 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ccdc60Q8C4J0 Nr3c1-202ENSMUST00000097592 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ccdc60Q8C4J0 Gm10424-202ENSMUST00000201031 1848 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Ccdc60Q8C4J0 Tardbp-205ENSMUST00000105700 923 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Ccdc60Q8C4J0 Omt2a-202ENSMUST00000113376 478 ntAPPRIS ALT2 TSL 3 BASIC9.62□□□□□ -0.87
Ccdc60Q8C4J0 Gm25692-201ENSMUST00000175444 125 ntBASIC9.62□□□□□ -0.87
Ccdc60Q8C4J0 Gm29435-201ENSMUST00000191310 689 ntBASIC9.62□□□□□ -0.87
Ccdc60Q8C4J0 Gm38063-201ENSMUST00000193990 342 ntBASIC9.62□□□□□ -0.87
Ccdc60Q8C4J0 Tial1-214ENSMUST00000205835 562 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Ccdc60Q8C4J0 Gm32842-201ENSMUST00000212653 738 ntBASIC9.62□□□□□ -0.87
Ccdc60Q8C4J0 AC152819.1-201ENSMUST00000220435 871 ntTSL 5 BASIC9.62□□□□□ -0.87
Ccdc60Q8C4J0 AC154382.1-201ENSMUST00000220958 1282 ntBASIC9.62□□□□□ -0.87
Ccdc60Q8C4J0 E130119H09Rik-201ENSMUST00000223176 978 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Ccdc60Q8C4J0 4933413J09Rik-201ENSMUST00000022427 899 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Ccdc60Q8C4J0 AC161537.1-202ENSMUST00000228450 868 ntBASIC9.62□□□□□ -0.87
Ccdc60Q8C4J0 Gstm2-202ENSMUST00000066530 854 ntTSL 3 BASIC9.62□□□□□ -0.87
Ccdc60Q8C4J0 Klk1b8-201ENSMUST00000072204 859 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ccdc60Q8C4J0 Gm6054-201ENSMUST00000078052 378 ntBASIC9.62□□□□□ -0.87
Ccdc60Q8C4J0 Slc1a3-201ENSMUST00000005493 4163 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ccdc60Q8C4J0 Mapk1ip1l-202ENSMUST00000166743 4542 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ccdc60Q8C4J0 Hook3-201ENSMUST00000037182 12836 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ccdc60Q8C4J0 Zfp111-203ENSMUST00000086006 6402 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ccdc60Q8C4J0 Ccl20-201ENSMUST00000027351 1417 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Ccdc60Q8C4J0 Ctxn3-201ENSMUST00000091892 1441 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ccdc60Q8C4J0 Zfp790-201ENSMUST00000032796 3376 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ccdc60Q8C4J0 Samd3-206ENSMUST00000220219 1744 ntAPPRIS P4 TSL 5 BASIC9.62□□□□□ -0.87
Ccdc60Q8C4J0 Gm37648-201ENSMUST00000192072 2563 ntBASIC9.62□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms