Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Galnt5-201ENSMUST00000112616 4225 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Trub1Q8C0D0 Gm28077-201ENSMUST00000190250 1635 ntTSL 5 BASIC7.81□□□□□ -1.16
Trub1Q8C0D0 Olfr702-204ENSMUST00000219803 1646 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Trub1Q8C0D0 Gm44737-201ENSMUST00000206950 2355 ntTSL 5 BASIC7.81□□□□□ -1.16
Trub1Q8C0D0 Gm6729-201ENSMUST00000165173 1452 ntBASIC7.81□□□□□ -1.16
Trub1Q8C0D0 Ect2l-204ENSMUST00000208948 2862 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
Trub1Q8C0D0 Gm37245-201ENSMUST00000195137 2713 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Trub1Q8C0D0 Stt3a-201ENSMUST00000120381 5867 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Trub1Q8C0D0 Lrrc46-201ENSMUST00000021251 1336 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Trub1Q8C0D0 Kcnmb2-204ENSMUST00000191869 1552 ntTSL 5 BASIC7.8□□□□□ -1.16
Trub1Q8C0D0 Cntn5-205ENSMUST00000179049 2682 ntTSL 5 BASIC7.8□□□□□ -1.16
Trub1Q8C0D0 8430437L04Rik-201ENSMUST00000124829 1663 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Trub1Q8C0D0 4933406G16Rik-201ENSMUST00000144854 1415 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Trub1Q8C0D0 9430034N14Rik-201ENSMUST00000193532 3785 ntBASIC7.8□□□□□ -1.16
Trub1Q8C0D0 G630018N14Rik-203ENSMUST00000221171 5888 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Trub1Q8C0D0 Tbc1d24-205ENSMUST00000168378 4350 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Trub1Q8C0D0 B230118H07Rik-203ENSMUST00000111231 2273 ntAPPRIS P2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Trub1Q8C0D0 Vmn1r44-208ENSMUST00000227456 2031 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
Trub1Q8C0D0 Gm6356-201ENSMUST00000166618 1757 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Trub1Q8C0D0 Mroh2b-201ENSMUST00000045736 4829 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Trub1Q8C0D0 Cep170-212ENSMUST00000194727 6784 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
Trub1Q8C0D0 Igkv1-117-201ENSMUST00000103317 404 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
Trub1Q8C0D0 Gm25273-201ENSMUST00000104295 115 ntBASIC7.8□□□□□ -1.16
Trub1Q8C0D0 Lrrc51-206ENSMUST00000106966 821 ntAPPRIS P1 TSL 2 BASIC7.8□□□□□ -1.16
Trub1Q8C0D0 Homer1-210ENSMUST00000109497 779 ntTSL 5 BASIC7.8□□□□□ -1.16
Trub1Q8C0D0 Homer1-211ENSMUST00000109498 815 ntTSL 5 BASIC7.8□□□□□ -1.16
Trub1Q8C0D0 Gm16221-201ENSMUST00000117331 393 ntBASIC7.8□□□□□ -1.16
Trub1Q8C0D0 Gm11309-201ENSMUST00000127108 613 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Trub1Q8C0D0 Gm15345-201ENSMUST00000128240 663 ntTSL 3 BASIC7.8□□□□□ -1.16
Trub1Q8C0D0 Zfp113-202ENSMUST00000132318 488 ntTSL 3 BASIC7.8□□□□□ -1.16
Trub1Q8C0D0 Gm15092-201ENSMUST00000138467 574 ntTSL 5 BASIC7.8□□□□□ -1.16
Trub1Q8C0D0 Gm11444-201ENSMUST00000146433 575 ntAPPRIS P1 TSL 3 BASIC7.8□□□□□ -1.16
Trub1Q8C0D0 Mir1962-201ENSMUST00000157516 121 ntBASIC7.8□□□□□ -1.16
Trub1Q8C0D0 Gm23007-201ENSMUST00000158951 177 ntBASIC7.8□□□□□ -1.16
Trub1Q8C0D0 0610012D04Rik-201ENSMUST00000159031 531 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Trub1Q8C0D0 Gm4340-201ENSMUST00000163113 807 ntAPPRIS ALT2 BASIC7.8□□□□□ -1.16
Trub1Q8C0D0 Gm4781-201ENSMUST00000167995 781 ntBASIC7.8□□□□□ -1.16
Trub1Q8C0D0 Gm2951-201ENSMUST00000169447 490 ntBASIC7.8□□□□□ -1.16
Trub1Q8C0D0 Gm4891-201ENSMUST00000182279 912 ntBASIC7.8□□□□□ -1.16
Trub1Q8C0D0 Gm7436-201ENSMUST00000187229 391 ntBASIC7.8□□□□□ -1.16
Trub1Q8C0D0 Gm8925-201ENSMUST00000197212 763 ntBASIC7.8□□□□□ -1.16
Trub1Q8C0D0 Gm42945-202ENSMUST00000197523 537 ntTSL 2 BASIC7.8□□□□□ -1.16
Trub1Q8C0D0 Gm23604-202ENSMUST00000198428 137 ntBASIC7.8□□□□□ -1.16
Trub1Q8C0D0 9530013L04Rik-201ENSMUST00000203393 782 ntBASIC7.8□□□□□ -1.16
Trub1Q8C0D0 Gm44129-201ENSMUST00000203511 675 ntTSL 3 BASIC7.8□□□□□ -1.16
Trub1Q8C0D0 Gm35392-201ENSMUST00000209934 2121 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Trub1Q8C0D0 Gm45454-201ENSMUST00000211484 455 ntBASIC7.8□□□□□ -1.16
Trub1Q8C0D0 CT572999.1-201ENSMUST00000220315 1260 ntBASIC7.8□□□□□ -1.16
Trub1Q8C0D0 Alox5ap-201ENSMUST00000071130 1251 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Trub1Q8C0D0 Olfr1384-202ENSMUST00000213776 4437 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Trub1Q8C0D0 D630045J12Rik-201ENSMUST00000117556 10916 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
Trub1Q8C0D0 Patj-203ENSMUST00000102792 3755 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Trub1Q8C0D0 3110099E03Rik-203ENSMUST00000143695 1353 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Trub1Q8C0D0 Prickle2-204ENSMUST00000113447 7679 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Trub1Q8C0D0 Plec-218ENSMUST00000169714 15001 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Trub1Q8C0D0 Plec-201ENSMUST00000023226 15001 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Trub1Q8C0D0 Hipk2-205ENSMUST00000160962 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Trub1Q8C0D0 4930471D02Rik-201ENSMUST00000180815 2075 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Trub1Q8C0D0 Cdh23-201ENSMUST00000073242 10688 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
Trub1Q8C0D0 Slc25a53-203ENSMUST00000113070 3140 ntTSL 5 BASIC7.8□□□□□ -1.16
Trub1Q8C0D0 Mcm10-201ENSMUST00000027980 3494 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Trub1Q8C0D0 Dlgap2-201ENSMUST00000043279 3580 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
Trub1Q8C0D0 Gm6786-201ENSMUST00000203165 1915 ntBASIC7.8□□□□□ -1.16
Trub1Q8C0D0 Trrap-215ENSMUST00000213013 12398 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
Trub1Q8C0D0 Olfr316-202ENSMUST00000215071 2719 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Trub1Q8C0D0 Lrrtm3-201ENSMUST00000105439 3896 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Trub1Q8C0D0 Sema6a-210ENSMUST00000156422 3291 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Trub1Q8C0D0 Gm45017-201ENSMUST00000206842 1777 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Trub1Q8C0D0 Olfr460-202ENSMUST00000216942 3370 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Trub1Q8C0D0 Gm2694-201ENSMUST00000180700 2314 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Trub1Q8C0D0 Ptk6-201ENSMUST00000016511 3689 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Trub1Q8C0D0 Zfp111-203ENSMUST00000086006 6402 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
Trub1Q8C0D0 Tardbp-205ENSMUST00000105700 923 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Trub1Q8C0D0 Mobp-203ENSMUST00000111627 481 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.16
Trub1Q8C0D0 Gm16143-201ENSMUST00000155982 538 ntTSL 5 BASIC7.79□□□□□ -1.16
Trub1Q8C0D0 Gm24011-201ENSMUST00000157732 268 ntBASIC7.79□□□□□ -1.16
Trub1Q8C0D0 Gm25437-201ENSMUST00000158282 132 ntBASIC7.79□□□□□ -1.16
Trub1Q8C0D0 Gm22687-201ENSMUST00000158301 105 ntBASIC7.79□□□□□ -1.16
Trub1Q8C0D0 Gm17057-201ENSMUST00000169887 591 ntTSL 3 BASIC7.79□□□□□ -1.16
Trub1Q8C0D0 Mir3078-201ENSMUST00000175231 87 ntBASIC7.79□□□□□ -1.16
Trub1Q8C0D0 4833412C05Rik-201ENSMUST00000181235 1083 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Trub1Q8C0D0 6530411M01Rik-201ENSMUST00000181618 1033 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Trub1Q8C0D0 Gm7763-201ENSMUST00000182220 1006 ntBASIC7.79□□□□□ -1.16
Trub1Q8C0D0 Gm8304-201ENSMUST00000185744 584 ntBASIC7.79□□□□□ -1.16
Trub1Q8C0D0 1700066B17Rik-202ENSMUST00000187091 675 ntTSL 3 BASIC7.79□□□□□ -1.16
Trub1Q8C0D0 Gm28869-201ENSMUST00000187199 811 ntTSL 3 BASIC7.79□□□□□ -1.16
Trub1Q8C0D0 Gm8004-201ENSMUST00000187782 617 ntBASIC7.79□□□□□ -1.16
Trub1Q8C0D0 Gm38078-201ENSMUST00000192771 392 ntBASIC7.79□□□□□ -1.16
Trub1Q8C0D0 Gm19035-202ENSMUST00000194575 959 ntBASIC7.79□□□□□ -1.16
Trub1Q8C0D0 Spink8-202ENSMUST00000198988 768 ntAPPRIS P2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Trub1Q8C0D0 Tex26-207ENSMUST00000202920 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Trub1Q8C0D0 Gm44448-201ENSMUST00000205104 393 ntTSL 5 BASIC7.79□□□□□ -1.16
Trub1Q8C0D0 AC129017.2-201ENSMUST00000226118 1284 ntBASIC7.79□□□□□ -1.16
Trub1Q8C0D0 Fgf21-201ENSMUST00000033099 951 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Trub1Q8C0D0 Olfr984-201ENSMUST00000056795 945 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Trub1Q8C0D0 Arl9-201ENSMUST00000071199 402 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.16
Trub1Q8C0D0 Gm4953-201ENSMUST00000077309 483 ntBASIC7.79□□□□□ -1.16
Trub1Q8C0D0 Mir135b-201ENSMUST00000083501 97 ntBASIC7.79□□□□□ -1.16
Trub1Q8C0D0 Tardbp-203ENSMUST00000095719 1011 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Trub1Q8C0D0 Prkg1-201ENSMUST00000065067 3914 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms