Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Vmn1r70-204ENSMUST00000228090 3185 ntAPPRIS ALT2 BASIC8.54□□□□□ -1.04
Rrp1P56183 Wdfy4-201ENSMUST00000061753 9681 ntAPPRIS P2 TSL 5 BASIC8.54□□□□□ -1.04
Rrp1P56183 AC121286.2-201ENSMUST00000218069 2470 ntBASIC8.54□□□□□ -1.04
Rrp1P56183 Tex52-202ENSMUST00000130785 1424 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Rrp1P56183 4930448K20Rik-202ENSMUST00000182072 1433 ntBASIC8.54□□□□□ -1.04
Rrp1P56183 Glrb-206ENSMUST00000194085 1341 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Rrp1P56183 Gm44509-201ENSMUST00000205400 1324 ntBASIC8.54□□□□□ -1.04
Rrp1P56183 Gm45645-201ENSMUST00000211470 1963 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Rrp1P56183 Atf2-201ENSMUST00000055833 4210 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Rrp1P56183 Fbxw10-203ENSMUST00000150989 3267 ntAPPRIS P3 TSL 5 BASIC8.53□□□□□ -1.04
Rrp1P56183 4930511E03Rik-201ENSMUST00000203778 2232 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Rrp1P56183 Adgrb3-201ENSMUST00000041838 5059 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Rrp1P56183 Gm15097-201ENSMUST00000101180 2029 ntAPPRIS P2 TSL 5 BASIC8.53□□□□□ -1.04
Rrp1P56183 Gm15127-201ENSMUST00000101186 2026 ntAPPRIS P2 TSL 5 BASIC8.53□□□□□ -1.04
Rrp1P56183 Gm15091-201ENSMUST00000112740 2026 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Rrp1P56183 Gm15107-201ENSMUST00000112796 2028 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Rrp1P56183 Gm15080-201ENSMUST00000112804 2029 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Rrp1P56183 Gm15109-201ENSMUST00000133085 2026 ntBASIC8.53□□□□□ -1.04
Rrp1P56183 Ott-201ENSMUST00000177554 2028 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Rrp1P56183 Ott-202ENSMUST00000177606 2028 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Rrp1P56183 Gm15085-201ENSMUST00000178169 2028 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Rrp1P56183 Ott-203ENSMUST00000179348 2028 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Rrp1P56183 Snhg17-209ENSMUST00000186993 3144 ntBASIC8.53□□□□□ -1.04
Rrp1P56183 Tcf7l2-210ENSMUST00000111657 4126 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
Rrp1P56183 AC154141.1-201ENSMUST00000208403 4136 ntBASIC8.53□□□□□ -1.04
Rrp1P56183 Ppp3cc-203ENSMUST00000228911 1836 ntAPPRIS ALT2 BASIC8.53□□□□□ -1.04
Rrp1P56183 Rps27a-201ENSMUST00000102844 637 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Rrp1P56183 Ccdc163-203ENSMUST00000106463 1159 ntAPPRIS P2 TSL 5 BASIC8.53□□□□□ -1.04
Rrp1P56183 Gm41-201ENSMUST00000116183 1023 ntBASIC8.53□□□□□ -1.04
Rrp1P56183 Fau-ps2-201ENSMUST00000119333 371 ntBASIC8.53□□□□□ -1.04
Rrp1P56183 Gm14414-201ENSMUST00000120833 573 ntBASIC8.53□□□□□ -1.04
Rrp1P56183 Gm12594-201ENSMUST00000132140 499 ntTSL 3 BASIC8.53□□□□□ -1.04
Rrp1P56183 Gm14339-201ENSMUST00000146224 423 ntTSL 2 BASIC8.53□□□□□ -1.04
Rrp1P56183 A530010F05Rik-201ENSMUST00000146845 1020 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Rrp1P56183 1700034H15Rik-205ENSMUST00000154116 926 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Rrp1P56183 Gm22224-201ENSMUST00000157357 93 ntBASIC8.53□□□□□ -1.04
Rrp1P56183 Mgst2-203ENSMUST00000159554 486 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Rrp1P56183 Ighv1-62-2-201ENSMUST00000163467 302 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Rrp1P56183 Ighv1-71-201ENSMUST00000166645 302 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Rrp1P56183 Krr1-204ENSMUST00000174653 972 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
Rrp1P56183 n-R5s115-201ENSMUST00000179019 119 ntBASIC8.53□□□□□ -1.04
Rrp1P56183 Gm29000-202ENSMUST00000185562 571 ntTSL 5 BASIC8.53□□□□□ -1.04
Rrp1P56183 Gm29617-203ENSMUST00000186558 1033 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Rrp1P56183 Gm28677-203ENSMUST00000187144 1134 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Rrp1P56183 Gm29240-201ENSMUST00000187248 286 ntBASIC8.53□□□□□ -1.04
Rrp1P56183 Gm28749-204ENSMUST00000187827 571 ntTSL 5 BASIC8.53□□□□□ -1.04
Rrp1P56183 Gm29178-207ENSMUST00000188496 1013 ntTSL 5 BASIC8.53□□□□□ -1.04
Rrp1P56183 Gm28844-206ENSMUST00000189297 815 ntTSL 5 BASIC8.53□□□□□ -1.04
Rrp1P56183 Gm29462-201ENSMUST00000191458 288 ntBASIC8.53□□□□□ -1.04
Rrp1P56183 Gm38289-201ENSMUST00000194273 597 ntTSL 5 BASIC8.53□□□□□ -1.04
Rrp1P56183 Gm37371-201ENSMUST00000194837 392 ntBASIC8.53□□□□□ -1.04
Rrp1P56183 Ceacam-ps1-201ENSMUST00000205380 794 ntTSL 2 BASIC8.53□□□□□ -1.04
Rrp1P56183 Gm18469-201ENSMUST00000208850 439 ntBASIC8.53□□□□□ -1.04
Rrp1P56183 Gm45145-203ENSMUST00000208872 958 ntTSL 5 BASIC8.53□□□□□ -1.04
Rrp1P56183 Gm45432-201ENSMUST00000210391 416 ntBASIC8.53□□□□□ -1.04
Rrp1P56183 AC192091.1-201ENSMUST00000218668 439 ntBASIC8.53□□□□□ -1.04
Rrp1P56183 AC163660.3-202ENSMUST00000224917 464 ntBASIC8.53□□□□□ -1.04
Rrp1P56183 n-R5s193-201ENSMUST00000082864 109 ntBASIC8.53□□□□□ -1.04
Rrp1P56183 Gm340-201ENSMUST00000172371 3729 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Rrp1P56183 Lbhd1-202ENSMUST00000187504 3164 ntAPPRIS P1 TSL 3 BASIC8.53□□□□□ -1.04
Rrp1P56183 Calcr-205ENSMUST00000171613 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Rrp1P56183 Dip2b-203ENSMUST00000108971 8127 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Rrp1P56183 Gm37968-201ENSMUST00000195131 3201 ntBASIC8.53□□□□□ -1.04
Rrp1P56183 Ago3-201ENSMUST00000069097 15595 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Rrp1P56183 Ugt2b37-201ENSMUST00000075858 1894 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Rrp1P56183 Gimd1-201ENSMUST00000163241 1413 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Rrp1P56183 Gm42636-201ENSMUST00000197174 2239 ntBASIC8.53□□□□□ -1.04
Rrp1P56183 Usp40-204ENSMUST00000187758 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Rrp1P56183 Zfp882-201ENSMUST00000110002 3152 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Rrp1P56183 Senp8-207ENSMUST00000217093 1663 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
Rrp1P56183 Cmtr2-201ENSMUST00000056972 3545 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Rrp1P56183 Gm18194-202ENSMUST00000210952 3442 ntBASIC8.52□□□□□ -1.04
Rrp1P56183 Folh1-202ENSMUST00000107271 2516 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.04
Rrp1P56183 Tek-201ENSMUST00000071168 4176 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.04
Rrp1P56183 Olfr1555-ps1-201ENSMUST00000207679 2791 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
Rrp1P56183 Sox5-201ENSMUST00000038815 7243 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Rrp1P56183 1700031F05Rik-201ENSMUST00000048061 1361 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Rrp1P56183 Gm36380-201ENSMUST00000210339 4379 ntTSL 5 BASIC8.52□□□□□ -1.05
Rrp1P56183 Gm6101-201ENSMUST00000195384 1867 ntBASIC8.52□□□□□ -1.05
Rrp1P56183 Gm11756-202ENSMUST00000107312 924 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
Rrp1P56183 Tmem91-202ENSMUST00000108404 485 ntTSL 5 BASIC8.52□□□□□ -1.05
Rrp1P56183 Gm15154-201ENSMUST00000117590 366 ntBASIC8.52□□□□□ -1.05
Rrp1P56183 Gm13683-201ENSMUST00000119497 1076 ntBASIC8.52□□□□□ -1.05
Rrp1P56183 Gm15062-201ENSMUST00000120567 367 ntBASIC8.52□□□□□ -1.05
Rrp1P56183 4930513N10Rik-202ENSMUST00000132616 490 ntTSL 3 BASIC8.52□□□□□ -1.05
Rrp1P56183 Defa-ps3-201ENSMUST00000142705 282 ntBASIC8.52□□□□□ -1.05
Rrp1P56183 Gm13269-201ENSMUST00000143458 655 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Rrp1P56183 Gm25265-201ENSMUST00000158520 347 ntBASIC8.52□□□□□ -1.05
Rrp1P56183 Rps12-ps22-201ENSMUST00000179382 402 ntBASIC8.52□□□□□ -1.05
Rrp1P56183 Peak1os-201ENSMUST00000181444 1264 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Rrp1P56183 Gm28941-201ENSMUST00000185536 1017 ntBASIC8.52□□□□□ -1.05
Rrp1P56183 Gm6799-201ENSMUST00000186919 573 ntBASIC8.52□□□□□ -1.05
Rrp1P56183 Gm28622-201ENSMUST00000189842 507 ntTSL 5 BASIC8.52□□□□□ -1.05
Rrp1P56183 C430002N11Rik-204ENSMUST00000190054 443 ntTSL 3 BASIC8.52□□□□□ -1.05
Rrp1P56183 Gm29562-201ENSMUST00000190113 904 ntBASIC8.52□□□□□ -1.05
Rrp1P56183 Gm43805-201ENSMUST00000198488 824 ntBASIC8.52□□□□□ -1.05
Rrp1P56183 Gm45394-201ENSMUST00000209240 1175 ntBASIC8.52□□□□□ -1.05
Rrp1P56183 Olfr882-ps1-201ENSMUST00000211842 450 ntBASIC8.52□□□□□ -1.05
Rrp1P56183 AC132474.3-201ENSMUST00000213244 383 ntTSL 5 BASIC8.52□□□□□ -1.05
Rrp1P56183 Gm18972-201ENSMUST00000218873 630 ntBASIC8.52□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms