Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm11412-201ENSMUST00000144875 2800 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cux1P53564 Tars2-203ENSMUST00000098857 3228 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cux1P53564 Gm44007-201ENSMUST00000203845 2189 ntBASIC11.57□□□□□ -0.56
Cux1P53564 Gm7285-201ENSMUST00000198801 580 ntBASIC11.57□□□□□ -0.56
Cux1P53564 AC105167.1-201ENSMUST00000219966 253 ntTSL 5 BASIC11.57□□□□□ -0.56
Cux1P53564 Nup43-201ENSMUST00000040135 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cux1P53564 Olfr1491-201ENSMUST00000052737 960 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Cux1P53564 n-R5s169-201ENSMUST00000083110 120 ntBASIC11.57□□□□□ -0.56
Cux1P53564 Gm44812-201ENSMUST00000207627 5349 ntTSL 5 BASIC11.57□□□□□ -0.56
Cux1P53564 1810041L15Rik-201ENSMUST00000080751 5917 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cux1P53564 Rab2b-202ENSMUST00000100631 2619 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cux1P53564 D430042O09Rik-203ENSMUST00000124223 5874 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cux1P53564 Frmd4a-219ENSMUST00000177457 6538 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Cux1P53564 Pah-201ENSMUST00000020241 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cux1P53564 Unc5c-201ENSMUST00000075282 3890 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cux1P53564 Ppfibp2-201ENSMUST00000040056 3310 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cux1P53564 Oas3-201ENSMUST00000044833 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cux1P53564 4930505O20Rik-201ENSMUST00000142188 1758 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cux1P53564 Fto-201ENSMUST00000069718 3564 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cux1P53564 Bsn-201ENSMUST00000035208 15938 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Cux1P53564 L3mbtl3-201ENSMUST00000040219 4572 ntAPPRIS P3 TSL 5 BASIC11.56□□□□□ -0.56
Cux1P53564 Gm13282-201ENSMUST00000121577 545 ntBASIC11.56□□□□□ -0.56
Cux1P53564 Gm25780-201ENSMUST00000122528 253 ntBASIC11.56□□□□□ -0.56
Cux1P53564 Pramef12os-201ENSMUST00000133334 767 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cux1P53564 Gm14218-201ENSMUST00000137802 595 ntTSL 5 BASIC11.56□□□□□ -0.56
Cux1P53564 Gm16138-201ENSMUST00000159341 821 ntBASIC11.56□□□□□ -0.56
Cux1P53564 Gm28801-201ENSMUST00000188761 449 ntBASIC11.56□□□□□ -0.56
Cux1P53564 Gm38200-201ENSMUST00000192083 2111 ntBASIC11.56□□□□□ -0.56
Cux1P53564 D730003K21Rik-202ENSMUST00000217456 533 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cux1P53564 Gm19217-201ENSMUST00000218238 328 ntBASIC11.56□□□□□ -0.56
Cux1P53564 AC153567.1-201ENSMUST00000218424 1263 ntTSL 5 BASIC11.56□□□□□ -0.56
Cux1P53564 Olfr417-201ENSMUST00000085862 930 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Cux1P53564 Slxl1-201ENSMUST00000088740 730 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cux1P53564 Olfr633-201ENSMUST00000098188 939 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Cux1P53564 Arhgap12-212ENSMUST00000182559 4265 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cux1P53564 AI506816-205ENSMUST00000199941 2804 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cux1P53564 D5Ertd615e-202ENSMUST00000197016 3911 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cux1P53564 Cep83os-201ENSMUST00000181906 6566 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cux1P53564 Gm43571-201ENSMUST00000200067 3098 ntBASIC11.56□□□□□ -0.56
Cux1P53564 Myo7b-201ENSMUST00000134663 6621 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cux1P53564 B230323A14Rik-201ENSMUST00000180488 2864 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cux1P53564 Gm28651-202ENSMUST00000227968 2693 ntBASIC11.56□□□□□ -0.56
Cux1P53564 Arhgap17-211ENSMUST00000207010 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cux1P53564 Ttc30a1-201ENSMUST00000099994 3721 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Cux1P53564 Gm43311-201ENSMUST00000200016 2377 ntBASIC11.56□□□□□ -0.56
Cux1P53564 Ampd3-208ENSMUST00000213373 3337 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Cux1P53564 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Cux1P53564 Myom1-203ENSMUST00000179759 5308 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Cux1P53564 Gm10475-201ENSMUST00000084713 1796 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cux1P53564 Slc35a5-202ENSMUST00000114600 679 ntTSL 3 BASIC11.55□□□□□ -0.56
Cux1P53564 Gm11443-201ENSMUST00000118790 479 ntBASIC11.55□□□□□ -0.56
Cux1P53564 Gm12903-201ENSMUST00000121015 544 ntBASIC11.55□□□□□ -0.56
Cux1P53564 Gm15188-201ENSMUST00000121264 704 ntBASIC11.55□□□□□ -0.56
Cux1P53564 Gm22728-201ENSMUST00000158087 129 ntBASIC11.55□□□□□ -0.56
Cux1P53564 Gm19480-201ENSMUST00000185547 667 ntBASIC11.55□□□□□ -0.56
Cux1P53564 Gm44227-201ENSMUST00000203576 241 ntBASIC11.55□□□□□ -0.56
Cux1P53564 Tmc3-201ENSMUST00000039317 6221 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cux1P53564 Gm42514-201ENSMUST00000196636 1832 ntBASIC11.55□□□□□ -0.56
Cux1P53564 Hibch-201ENSMUST00000044478 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cux1P53564 Gm6327-201ENSMUST00000171185 1335 ntBASIC11.55□□□□□ -0.56
Cux1P53564 Olfr523-204ENSMUST00000214272 3780 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Cux1P53564 Gm5402-201ENSMUST00000119588 1618 ntBASIC11.55□□□□□ -0.56
Cux1P53564 Psmf1-201ENSMUST00000042452 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cux1P53564 Grhl1-201ENSMUST00000020985 3070 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cux1P53564 Trim38-203ENSMUST00000226039 1999 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Cux1P53564 Rgs19-206ENSMUST00000108778 1427 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cux1P53564 Rgs19-212ENSMUST00000165416 1427 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cux1P53564 Sec16b-202ENSMUST00000086130 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cux1P53564 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Cux1P53564 Tdrd1-204ENSMUST00000121249 5047 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cux1P53564 Nr3c1-202ENSMUST00000097592 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cux1P53564 RMST_1.1-209ENSMUST00000219444 2679 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cux1P53564 Atp6v1a-202ENSMUST00000114666 4234 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cux1P53564 Gucy1b2-201ENSMUST00000022501 2711 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cux1P53564 Rnase4-201ENSMUST00000022428 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cux1P53564 Hipk1-202ENSMUST00000106845 3967 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cux1P53564 Gm19028-201ENSMUST00000189614 1873 ntBASIC11.55□□□□□ -0.56
Cux1P53564 Mat1a-203ENSMUST00000225720 3468 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Cux1P53564 Gm11858-201ENSMUST00000117935 838 ntBASIC11.55□□□□□ -0.56
Cux1P53564 Olfr634-ps1-201ENSMUST00000119267 955 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Cux1P53564 Gm12879-201ENSMUST00000120003 1182 ntBASIC11.55□□□□□ -0.56
Cux1P53564 Slc25a5-ps-201ENSMUST00000162199 826 ntBASIC11.55□□□□□ -0.56
Cux1P53564 Gm18808-201ENSMUST00000173316 462 ntBASIC11.55□□□□□ -0.56
Cux1P53564 Gm20702-201ENSMUST00000176181 460 ntBASIC11.55□□□□□ -0.56
Cux1P53564 Gm9745-202ENSMUST00000187196 858 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cux1P53564 Gm29354-201ENSMUST00000187613 696 ntBASIC11.55□□□□□ -0.56
Cux1P53564 Ptma-204ENSMUST00000188533 593 ntTSL 3 BASIC11.55□□□□□ -0.56
Cux1P53564 Gm18593-201ENSMUST00000200754 1139 ntBASIC11.55□□□□□ -0.56
Cux1P53564 Rtp4-204ENSMUST00000211349 842 ntTSL 3 BASIC11.55□□□□□ -0.56
Cux1P53564 AC102582.2-201ENSMUST00000214658 1137 ntTSL 5 BASIC11.55□□□□□ -0.56
Cux1P53564 AC154627.1-201ENSMUST00000228799 1286 ntBASIC11.55□□□□□ -0.56
Cux1P53564 Frg1-201ENSMUST00000033999 1039 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cux1P53564 Gm10568-201ENSMUST00000193244 1634 ntBASIC11.55□□□□□ -0.56
Cux1P53564 Dicer1-201ENSMUST00000041987 9851 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cux1P53564 Arhgef3-202ENSMUST00000224981 3618 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Cux1P53564 C330007P06Rik-202ENSMUST00000115248 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cux1P53564 Cenpo-205ENSMUST00000140975 4348 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cux1P53564 Rbbp4-201ENSMUST00000102598 4407 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cux1P53564 Galnt15-201ENSMUST00000022460 6326 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cux1P53564 Gm37159-201ENSMUST00000192720 3605 ntBASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms